RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 ANKARQ7Z5J8 1434 aa17.81■□□□□ 0.44
HDAC6-219ENST00000476625 ONECUT3O60422 494 aaPredicted RBP17.8■□□□□ 0.44
HDAC6-219ENST00000476625 SF3B2Q13435 895 aaKnown RBP17.8■□□□□ 0.44
HDAC6-219ENST00000476625 TULP4Q9NRJ4 1543 aa17.8■□□□□ 0.44
HDAC6-219ENST00000476625 ITSN1Q15811 1721 aa17.78■□□□□ 0.44
HDAC6-219ENST00000476625 KDM2AQ9Y2K7 1162 aa17.77■□□□□ 0.44
HDAC6-219ENST00000476625 RAB3GAP2Q9H2M9 1393 aa17.77■□□□□ 0.43
HDAC6-219ENST00000476625 ACIN1Q9UKV3 1341 aaKnown RBP17.76■□□□□ 0.43
HDAC6-219ENST00000476625 EN1Q05925 392 aaPredicted RBP17.76■□□□□ 0.43
HDAC6-219ENST00000476625 TOPAZ1Q8N9V7 1692 aa17.74■□□□□ 0.43
HDAC6-219ENST00000476625 ATP7BP35670 1465 aa17.74■□□□□ 0.43
HDAC6-219ENST00000476625 PAK3O75914 559 aaPredicted RBP17.73■□□□□ 0.43
HDAC6-219ENST00000476625 HRCP23327 699 aa17.73■□□□□ 0.43
HDAC6-219ENST00000476625 CHRNA2Q15822 529 aa17.73■□□□□ 0.43
HDAC6-219ENST00000476625 SPATA31A5Q5VU36 1347 aa17.72■□□□□ 0.43
HDAC6-219ENST00000476625 SPATA31A7Q8IWB4 1347 aa17.72■□□□□ 0.43
HDAC6-219ENST00000476625 GPRASP1Q5JY77 1395 aa17.72■□□□□ 0.43
HDAC6-219ENST00000476625 BAG6P46379 1132 aa17.72■□□□□ 0.43
HDAC6-219ENST00000476625 NUTM2GQ5VZR2 741 aa17.72■□□□□ 0.43
HDAC6-219ENST00000476625 WASLO00401 505 aaPredicted RBP17.71■□□□□ 0.43
HDAC6-219ENST00000476625 DCAF11Q8TEB1 546 aa17.71■□□□□ 0.43
HDAC6-219ENST00000476625 NUP188Q5SRE5 1749 aa17.7■□□□□ 0.42
HDAC6-219ENST00000476625 KIAA0232Q92628 1395 aa17.7■□□□□ 0.42
HDAC6-219ENST00000476625 R3HDM1Q15032 1099 aaKnown RBP17.7■□□□□ 0.42
HDAC6-219ENST00000476625 EZH2Q15910 746 aaKnown RBP17.7■□□□□ 0.42
HDAC6-219ENST00000476625 NGDNQ8NEJ9 315 aaKnown RBP17.7■□□□□ 0.42
HDAC6-219ENST00000476625 NRKQ7Z2Y5 1582 aa17.7■□□□□ 0.42
HDAC6-219ENST00000476625 RREB1Q92766 1687 aa17.69■□□□□ 0.42
HDAC6-219ENST00000476625 PRDM11Q9NQV5 511 aa17.69■□□□□ 0.42
HDAC6-219ENST00000476625 STRN4Q9NRL3 753 aa17.69■□□□□ 0.42
HDAC6-219ENST00000476625 ZC3H6P61129 1189 aaKnown RBP17.67■□□□□ 0.42
HDAC6-219ENST00000476625 USP35Q9P2H5 1018 aa17.66■□□□□ 0.42
HDAC6-219ENST00000476625 LMO7Q8WWI1 1683 aa17.66■□□□□ 0.42
HDAC6-219ENST00000476625 SPATA31A1Q5TZJ5 1347 aa17.66■□□□□ 0.42
HDAC6-219ENST00000476625 TRIM37O94972 964 aa17.65■□□□□ 0.42
HDAC6-219ENST00000476625 NUDT16Q96DE0 195 aaKnown RBP17.65■□□□□ 0.42
HDAC6-219ENST00000476625 CAMTA1Q9Y6Y1 1673 aa17.64■□□□□ 0.42
HDAC6-219ENST00000476625 EIF3AQ14152 1382 aaKnown RBP17.64■□□□□ 0.41
HDAC6-219ENST00000476625 DISP2A7MBM2 1401 aa17.64■□□□□ 0.41
HDAC6-219ENST00000476625 CAMKK2Q96RR4 588 aa17.61■□□□□ 0.41
HDAC6-219ENST00000476625 CDK19Q9BWU1 502 aa17.61■□□□□ 0.41
HDAC6-219ENST00000476625 SSH2Q76I76 1423 aa17.61■□□□□ 0.41
HDAC6-219ENST00000476625 LARP1Q6PKG0 1096 aaKnown RBP17.6■□□□□ 0.41
HDAC6-219ENST00000476625 ACEP12821 1306 aa17.6■□□□□ 0.41
HDAC6-219ENST00000476625 KIAA1210Q9ULL0 1709 aa17.58■□□□□ 0.41
HDAC6-219ENST00000476625 QRICH2Q9H0J4 1663 aa17.58■□□□□ 0.41
HDAC6-219ENST00000476625 POLR3AO14802 1390 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-219ENST00000476625 APBA3O96018 575 aa17.58■□□□□ 0.4
HDAC6-219ENST00000476625 WNK3Q9BYP7 1800 aa17.58■□□□□ 0.4
HDAC6-219ENST00000476625 PARP4Q9UKK3 1724 aaKnown RBP17.58■□□□□ 0.4
HDAC6-219ENST00000476625 SBF2Q86WG5 1849 aa17.57■□□□□ 0.4
HDAC6-219ENST00000476625 LRRC37A3O60309 1634 aa17.57■□□□□ 0.4
HDAC6-219ENST00000476625 RGPD5Q99666 1765 aa17.56■□□□□ 0.4
HDAC6-219ENST00000476625 PEAK1Q9H792 1746 aa17.56■□□□□ 0.4
HDAC6-219ENST00000476625 NBPF1Q3BBV0 1214 aa17.56■□□□□ 0.4
HDAC6-219ENST00000476625 NBPF8Q3BBV2 869 aa17.56■□□□□ 0.4
HDAC6-219ENST00000476625 ZBTB7CA1YPR0 619 aa17.54■□□□□ 0.4
HDAC6-219ENST00000476625 EVA1CP58658 441 aa17.54■□□□□ 0.4
HDAC6-219ENST00000476625 FAM196AQ6ZSG2 479 aa17.54■□□□□ 0.4
HDAC6-219ENST00000476625 COL5A2P05997 1499 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-219ENST00000476625 PIK3C2AO00443 1686 aa17.53■□□□□ 0.4
HDAC6-219ENST00000476625 ABTB2Q8N961 1025 aa17.53■□□□□ 0.4
HDAC6-219ENST00000476625 PPIP5K1Q6PFW1 1433 aa17.53■□□□□ 0.4
HDAC6-219ENST00000476625 USP19O94966 1318 aa17.52■□□□□ 0.4
HDAC6-219ENST00000476625 CABP2Q9NPB3 220 aa17.52■□□□□ 0.4
HDAC6-219ENST00000476625 COL18A1P39060 1754 aa17.52■□□□□ 0.4
HDAC6-219ENST00000476625 BARGINQ6ZT62 677 aa17.51■□□□□ 0.39
HDAC6-219ENST00000476625 PTF1AQ7RTS3 328 aa17.51■□□□□ 0.39
HDAC6-219ENST00000476625 PLEKHG3A1L390 1219 aa17.5■□□□□ 0.39
HDAC6-219ENST00000476625 PDE3BQ13370 1112 aa17.5■□□□□ 0.39
HDAC6-219ENST00000476625 CCDC61Q9Y6R9 512 aa17.5■□□□□ 0.39
HDAC6-219ENST00000476625 AKAP12Q02952 1782 aa17.49■□□□□ 0.39
HDAC6-219ENST00000476625 TCP11L2Q8N4U5 519 aa17.49■□□□□ 0.39
HDAC6-219ENST00000476625 CPDO75976 1380 aa17.49■□□□□ 0.39
HDAC6-219ENST00000476625 CASZ1Q86V15 1759 aa17.48■□□□□ 0.39
HDAC6-219ENST00000476625 SLIT3O75094 1523 aa17.48■□□□□ 0.39
HDAC6-219ENST00000476625 SRPK2P78362 688 aaKnown RBP17.48■□□□□ 0.39
HDAC6-219ENST00000476625 GCP02774 474 aa17.47■□□□□ 0.39
HDAC6-219ENST00000476625 PARD3Q8TEW0 1356 aa17.46■□□□□ 0.39
HDAC6-219ENST00000476625 RGPD3A6NKT7 1758 aaPredicted RBP17.45■□□□□ 0.38
HDAC6-219ENST00000476625 RGPD4Q7Z3J3 1758 aa17.45■□□□□ 0.38
HDAC6-219ENST00000476625 PDGFDQ9GZP0 370 aaPredicted RBP17.45■□□□□ 0.38
HDAC6-219ENST00000476625 CRB1P82279 1406 aa17.45■□□□□ 0.38
HDAC6-219ENST00000476625 ANO8Q9HCE9 1232 aaPredicted RBP17.44■□□□□ 0.38
HDAC6-219ENST00000476625 MYOM1P52179 1685 aa17.44■□□□□ 0.38
HDAC6-219ENST00000476625 USP6P35125 1406 aa17.44■□□□□ 0.38
HDAC6-219ENST00000476625 NLRP13Q86W25 1043 aa17.43■□□□□ 0.38
HDAC6-219ENST00000476625 CENPJQ9HC77 1338 aaPredicted RBP17.43■□□□□ 0.38
HDAC6-219ENST00000476625 TRPM1Q7Z4N2 1603 aa17.43■□□□□ 0.38
HDAC6-219ENST00000476625 OVOS2A0A0G2JMS6 1433 aa17.42■□□□□ 0.38
HDAC6-219ENST00000476625 OVOS2A0A0J9YW53 1432 aa17.42■□□□□ 0.38
HDAC6-219ENST00000476625 OVOS2Q6IE36 1432 aa17.42■□□□□ 0.38
HDAC6-219ENST00000476625 STAC3Q96MF2 364 aa17.42■□□□□ 0.38
HDAC6-219ENST00000476625 CABP1Q9NZU7 370 aa17.42■□□□□ 0.38
HDAC6-219ENST00000476625 AXIN2Q9Y2T1 843 aa17.42■□□□□ 0.38
HDAC6-219ENST00000476625 SOX12O15370 315 aa17.41■□□□□ 0.38
HDAC6-219ENST00000476625 NLRP6P59044 892 aa17.41■□□□□ 0.38
HDAC6-219ENST00000476625 NBPF14Q5TI25 921 aa17.4■□□□□ 0.38
HDAC6-219ENST00000476625 YY1P25490 414 aa17.39■□□□□ 0.37
HDAC6-219ENST00000476625 THRAP3Q9Y2W1 955 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms