RNA–Protein interactions for RNA: ENST00000476350.1

MACF1-216, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 5,304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-216ENST00000476350 RAPGEF4Q8WZA2 1011 aa10.61□□□□□ -0.71
MACF1-216ENST00000476350 PCDHB15Q9Y5E8 787 aa10.61□□□□□ -0.71
MACF1-216ENST00000476350 ATP7AQ04656 1500 aa10.61□□□□□ -0.71
MACF1-216ENST00000476350 CADPS2Q86UW7 1296 aa10.61□□□□□ -0.71
MACF1-216ENST00000476350 RLBP1P12271 317 aa10.61□□□□□ -0.71
MACF1-216ENST00000476350 UBE2Q2Q8WVN8 375 aa10.61□□□□□ -0.71
MACF1-216ENST00000476350 USP32Q8NFA0 1604 aa10.61□□□□□ -0.71
MACF1-216ENST00000476350 MFAP1P55081 439 aaKnown RBP10.6□□□□□ -0.71
MACF1-216ENST00000476350 TCP11L2Q8N4U5 519 aa10.6□□□□□ -0.71
MACF1-216ENST00000476350 VWDEQ8N2E2 1590 aa10.6□□□□□ -0.71
MACF1-216ENST00000476350 SYTL4Q96C24 671 aaPredicted RBP10.6□□□□□ -0.71
MACF1-216ENST00000476350 CWC22Q9HCG8 908 aaKnown RBP10.6□□□□□ -0.71
MACF1-216ENST00000476350 INO80Q9ULG1 1556 aaPredicted RBP10.6□□□□□ -0.71
MACF1-216ENST00000476350 U2SURPO15042 1029 aaKnown RBP10.6□□□□□ -0.71
MACF1-216ENST00000476350 GZF1Q9H116 711 aaPredicted RBP10.59□□□□□ -0.71
MACF1-216ENST00000476350 MVPQ14764 893 aaKnown RBP10.59□□□□□ -0.71
MACF1-216ENST00000476350 AFAP1Q8N556 730 aa10.59□□□□□ -0.71
MACF1-216ENST00000476350 ZNF518AQ6AHZ1 1483 aa10.59□□□□□ -0.71
MACF1-216ENST00000476350 TTC5Q8N0Z6 440 aa10.59□□□□□ -0.71
MACF1-216ENST00000476350 RRAGDQ9NQL2 400 aaPredicted RBP10.59□□□□□ -0.71
MACF1-216ENST00000476350 SETBP1Q9Y6X0 1596 aa10.58□□□□□ -0.72
MACF1-216ENST00000476350 ESCO1Q5FWF5 840 aa10.58□□□□□ -0.72
MACF1-216ENST00000476350 ZKSCAN2Q63HK3 967 aa10.58□□□□□ -0.72
MACF1-216ENST00000476350 NRXN1Q9ULB1 1477 aa10.58□□□□□ -0.72
MACF1-216ENST00000476350 HSCBQ8IWL3 235 aa10.58□□□□□ -0.72
MACF1-216ENST00000476350 C22orf23Q9BZE7 217 aa10.58□□□□□ -0.72
MACF1-216ENST00000476350 MSH6P52701 1360 aa10.58□□□□□ -0.72
MACF1-216ENST00000476350 TAF7LQ5H9L4 462 aa10.57□□□□□ -0.72
MACF1-216ENST00000476350 COG3Q96JB2 828 aa10.57□□□□□ -0.72
MACF1-216ENST00000476350 NOS1P29475 1434 aa10.57□□□□□ -0.72
MACF1-216ENST00000476350 DZIP1LQ8IYY4 767 aaKnown RBP10.57□□□□□ -0.72
MACF1-216ENST00000476350 EVC2Q86UK5 1308 aa10.57□□□□□ -0.72
MACF1-216ENST00000476350 RAPGEF3O95398 923 aa10.57□□□□□ -0.72
MACF1-216ENST00000476350 ITPRIPQ8IWB1 547 aa10.57□□□□□ -0.72
MACF1-216ENST00000476350 C16orf71Q8IYS4 520 aaPredicted RBP10.57□□□□□ -0.72
MACF1-216ENST00000476350 LMTK3Q96Q04 1460 aa10.57□□□□□ -0.72
MACF1-216ENST00000476350 PPRC1Q5VV67 1664 aaKnown RBP10.57□□□□□ -0.72
MACF1-216ENST00000476350 LMOD3Q0VAK6 560 aa10.56□□□□□ -0.72
MACF1-216ENST00000476350 CCDC27Q2M243 656 aa10.56□□□□□ -0.72
MACF1-216ENST00000476350 CHMP5Q9NZZ3 219 aa10.56□□□□□ -0.72
MACF1-216ENST00000476350 ARAP3Q8WWN8 1544 aa10.56□□□□□ -0.72
MACF1-216ENST00000476350 UHRF1BP1LA0JNW5 1464 aa10.56□□□□□ -0.72
MACF1-216ENST00000476350 NUTM2FA1L443 756 aa10.56□□□□□ -0.72
MACF1-216ENST00000476350 ABCA9Q8IUA7 1624 aa10.56□□□□□ -0.72
MACF1-216ENST00000476350 MROH1Q8NDA8 1641 aa10.56□□□□□ -0.72
MACF1-216ENST00000476350 MCM4P33991 863 aa10.56□□□□□ -0.72
MACF1-216ENST00000476350 OS9Q13438 667 aaPredicted RBP10.56□□□□□ -0.72
MACF1-216ENST00000476350 TRAK1Q9UPV9 953 aa10.56□□□□□ -0.72
MACF1-216ENST00000476350 NAP1L5Q96NT1 182 aaPredicted RBP10.55□□□□□ -0.72
MACF1-216ENST00000476350 SMC4Q9NTJ3 1288 aa10.55□□□□□ -0.72
MACF1-216ENST00000476350 ADGRB3O60242 1522 aa10.55□□□□□ -0.72
MACF1-216ENST00000476350 EFCAB6Q5THR3 1501 aa10.55□□□□□ -0.72
MACF1-216ENST00000476350 MTHFSP49914 203 aa10.55□□□□□ -0.72
MACF1-216ENST00000476350 PRDM11Q9NQV5 511 aa10.55□□□□□ -0.72
MACF1-216ENST00000476350 XRCC6P12956 609 aaKnown RBP eCLIP10.55□□□□□ -0.72
MACF1-216ENST00000476350 DDX11L8A8MPP1 907 aa10.55□□□□□ -0.72
MACF1-216ENST00000476350 U2AF1L5P0DN76 240 aaPredicted RBP10.54□□□□□ -0.72
MACF1-216ENST00000476350 U2AF1Q01081 240 aaKnown RBP eCLIP10.54□□□□□ -0.728e-7■□□□□ 9.5
MACF1-216ENST00000476350 ADGRB2O60241 1585 aa10.54□□□□□ -0.72
MACF1-216ENST00000476350 SLC12A5Q9H2X9 1139 aa10.54□□□□□ -0.72
MACF1-216ENST00000476350 ISY1Q9ULR0 285 aaKnown RBP10.54□□□□□ -0.72
MACF1-216ENST00000476350 TRAK2O60296 914 aa10.54□□□□□ -0.72
MACF1-216ENST00000476350 SBNO2Q9Y2G9 1366 aa10.54□□□□□ -0.72
MACF1-216ENST00000476350 FANCAO15360 1455 aa10.53□□□□□ -0.72
MACF1-216ENST00000476350 PPLO60437 1756 aa10.53□□□□□ -0.72
MACF1-216ENST00000476350 TSR2Q969E8 191 aaKnown RBP10.53□□□□□ -0.72
MACF1-216ENST00000476350 FSD2A1L4K1 749 aa10.53□□□□□ -0.72
MACF1-216ENST00000476350 DDX19BQ9UMR2 479 aa10.53□□□□□ -0.72
MACF1-216ENST00000476350 NLRP2Q9NX02 1062 aa10.52□□□□□ -0.72
MACF1-216ENST00000476350 CT47B1P0C2W7 299 aaPredicted RBP10.52□□□□□ -0.73
MACF1-216ENST00000476350 POLD1P28340 1107 aa10.52□□□□□ -0.73
MACF1-216ENST00000476350 ADGRL1O94910 1474 aa10.52□□□□□ -0.73
MACF1-216ENST00000476350 HDAC1Q13547 482 aaPredicted RBP10.52□□□□□ -0.73
MACF1-216ENST00000476350 LTV1Q96GA3 475 aaPredicted RBP10.52□□□□□ -0.73
MACF1-216ENST00000476350 NOB1Q9ULX3 412 aaKnown RBP10.52□□□□□ -0.73
MACF1-216ENST00000476350 NOL10Q9BSC4 688 aaKnown RBP10.52□□□□□ -0.73
MACF1-216ENST00000476350 NSD2O96028 1365 aa10.52□□□□□ -0.73
MACF1-216ENST00000476350 MRE11P49959 708 aa10.51□□□□□ -0.73
MACF1-216ENST00000476350 HSP90AB1P08238 724 aaKnown RBP10.51□□□□□ -0.73
MACF1-216ENST00000476350 EXOSC9Q06265 439 aaKnown RBP10.51□□□□□ -0.73
MACF1-216ENST00000476350 TRIM34Q9BYJ4 488 aa10.51□□□□□ -0.73
MACF1-216ENST00000476350 PANK2Q9BZ23 570 aa10.51□□□□□ -0.73
MACF1-216ENST00000476350 TEFQ10587 303 aa10.51□□□□□ -0.73
MACF1-216ENST00000476350 CTDP1Q9Y5B0 961 aaPredicted RBP10.51□□□□□ -0.73
MACF1-216ENST00000476350 TRIM27P14373 513 aa10.5□□□□□ -0.73
MACF1-216ENST00000476350 GLI2P10070 1586 aa10.5□□□□□ -0.73
MACF1-216ENST00000476350 STK31Q9BXU1 1019 aa10.5□□□□□ -0.73
MACF1-216ENST00000476350 TMEM132EQ6IEE7 984 aa10.5□□□□□ -0.73
MACF1-216ENST00000476350 GRPEL1Q9HAV7 217 aa10.5□□□□□ -0.73
MACF1-216ENST00000476350 LMTK2Q8IWU2 1503 aa10.5□□□□□ -0.73
MACF1-216ENST00000476350 NCBP3Q53F19 620 aaKnown RBP10.49□□□□□ -0.73
MACF1-216ENST00000476350 C14orf93Q9H972 538 aaKnown RBP10.49□□□□□ -0.73
MACF1-216ENST00000476350 STRN4Q9NRL3 753 aa10.49□□□□□ -0.73
MACF1-216ENST00000476350 CFAP74Q9C0B2 1584 aa10.49□□□□□ -0.73
MACF1-216ENST00000476350 ANKRD36BQ8N2N9 1353 aa10.49□□□□□ -0.73
MACF1-216ENST00000476350 ADGRB1O14514 1584 aa10.49□□□□□ -0.73
MACF1-216ENST00000476350 TULP4Q9NRJ4 1543 aa10.49□□□□□ -0.73
MACF1-216ENST00000476350 RBM33Q96EV2 1170 aaKnown RBP10.49□□□□□ -0.73
MACF1-216ENST00000476350 ATF7IPQ6VMQ6 1270 aa10.48□□□□□ -0.73
MACF1-216ENST00000476350 TOM1L2Q6ZVM7 507 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms