RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 TULP2O00295 520 aa5.32□□□□□ -1.56
USP16-205ENST00000474835 NOL7Q9UMY1 257 aaKnown RBP5.32□□□□□ -1.56
USP16-205ENST00000474835 PIK3C2AO00443 1686 aa5.32□□□□□ -1.56
USP16-205ENST00000474835 CAMTA1Q9Y6Y1 1673 aa5.32□□□□□ -1.56
USP16-205ENST00000474835 MAPK8IP3Q9UPT6 1336 aa5.32□□□□□ -1.56
USP16-205ENST00000474835 PLEKHG5O94827 1062 aa5.32□□□□□ -1.56
USP16-205ENST00000474835 RTN4Q9NQC3 1192 aaKnown RBP5.32□□□□□ -1.56
USP16-205ENST00000474835 SPTLC3Q9NUV7 552 aa5.32□□□□□ -1.56
USP16-205ENST00000474835 TMEM51Q9NW97 253 aa5.32□□□□□ -1.56
USP16-205ENST00000474835 RTL1A6NKG5 1358 aa5.32□□□□□ -1.56
USP16-205ENST00000474835 KIF16BQ96L93 1317 aa5.31□□□□□ -1.56
USP16-205ENST00000474835 ESPNB1AK53 854 aa5.31□□□□□ -1.56
USP16-205ENST00000474835 CIZ1Q9ULV3 898 aaPredicted RBP5.31□□□□□ -1.56
USP16-205ENST00000474835 ANKRD7Q92527 254 aa5.31□□□□□ -1.56
USP16-205ENST00000474835 MAP2P11137 1827 aaKnown RBP5.31□□□□□ -1.56
USP16-205ENST00000474835 KDM3BQ7LBC6 1761 aa5.31□□□□□ -1.56
USP16-205ENST00000474835 NUP155O75694 1391 aa5.31□□□□□ -1.56
USP16-205ENST00000474835 HDAC1Q13547 482 aaPredicted RBP5.31□□□□□ -1.56
USP16-205ENST00000474835 RTL5Q5HYW3 569 aaPredicted RBP5.31□□□□□ -1.56
USP16-205ENST00000474835 ARHGAP5Q13017 1502 aa5.3□□□□□ -1.56
USP16-205ENST00000474835 CTIFO43310 598 aaKnown RBP5.3□□□□□ -1.56
USP16-205ENST00000474835 FAM9BQ8IZU0 186 aa5.3□□□□□ -1.56
USP16-205ENST00000474835 SPATA31D1Q6ZQQ2 1576 aa5.3□□□□□ -1.56
USP16-205ENST00000474835 RBM10P98175 930 aaKnown RBP5.3□□□□□ -1.56
USP16-205ENST00000474835 FAM50AQ14320 339 aaKnown RBP5.3□□□□□ -1.56
USP16-205ENST00000474835 GRPEL1Q9HAV7 217 aa5.3□□□□□ -1.56
USP16-205ENST00000474835 PEAK1Q9H792 1746 aa5.29□□□□□ -1.56
USP16-205ENST00000474835 MCM5P33992 734 aa5.29□□□□□ -1.56
USP16-205ENST00000474835 STAC3Q96MF2 364 aa5.29□□□□□ -1.56
USP16-205ENST00000474835 ZNF644Q9H582 1327 aaPredicted RBP5.29□□□□□ -1.56
USP16-205ENST00000474835 ABCC6O95255 1503 aa5.29□□□□□ -1.56
USP16-205ENST00000474835 MAP7D2Q96T17 732 aa5.29□□□□□ -1.56
USP16-205ENST00000474835 KIF24Q5T7B8 1368 aa5.29□□□□□ -1.56
USP16-205ENST00000474835 MLH3Q9UHC1 1453 aa5.29□□□□□ -1.56
USP16-205ENST00000474835 ERBB3P21860 1342 aa5.29□□□□□ -1.56
USP16-205ENST00000474835 PPP2R1AP30153 589 aa5.28□□□□□ -1.56
USP16-205ENST00000474835 RICTORQ6R327 1708 aa5.28□□□□□ -1.56
USP16-205ENST00000474835 ATP10DQ9P241 1426 aa5.28□□□□□ -1.56
USP16-205ENST00000474835 ALS2Q96Q42 1657 aa5.28□□□□□ -1.56
USP16-205ENST00000474835 ATP7BP35670 1465 aa5.28□□□□□ -1.56
USP16-205ENST00000474835 RSPH4AQ5TD94 716 aa5.28□□□□□ -1.56
USP16-205ENST00000474835 KCND1Q9NSA2 647 aa5.28□□□□□ -1.56
USP16-205ENST00000474835 CARMIL2Q6F5E8 1435 aa5.28□□□□□ -1.56
USP16-205ENST00000474835 LMTK3Q96Q04 1460 aa5.28□□□□□ -1.56
USP16-205ENST00000474835 FER1L4A9Z1Z3 1794 aa5.27□□□□□ -1.57
USP16-205ENST00000474835 DYNC1I1O14576 645 aa5.27□□□□□ -1.57
USP16-205ENST00000474835 HSP90AA2PQ14568 343 aaPredicted RBP5.27□□□□□ -1.57
USP16-205ENST00000474835 PUS7Q96PZ0 661 aaKnown RBP5.27□□□□□ -1.57
USP16-205ENST00000474835 UBXN6Q9BZV1 441 aa5.27□□□□□ -1.57
USP16-205ENST00000474835 PCDHB15Q9Y5E8 787 aa5.27□□□□□ -1.57
USP16-205ENST00000474835 ZFYVE9O95405 1425 aa5.27□□□□□ -1.57
USP16-205ENST00000474835 PTPRMP28827 1452 aa5.27□□□□□ -1.57
USP16-205ENST00000474835 ST20-MTHFSA0A0A6YYL1 179 aa5.27□□□□□ -1.57
USP16-205ENST00000474835 SYCP1Q15431 976 aa5.27□□□□□ -1.57
USP16-205ENST00000474835 PODXL2Q9NZ53 605 aa5.27□□□□□ -1.57
USP16-205ENST00000474835 MRC1P22897 1456 aa5.26□□□□□ -1.57
USP16-205ENST00000474835 MMP14P50281 582 aa5.26□□□□□ -1.57
USP16-205ENST00000474835 ADAMTS8Q9UP79 889 aa5.26□□□□□ -1.57
USP16-205ENST00000474835 CASZ1Q86V15 1759 aa5.26□□□□□ -1.57
USP16-205ENST00000474835 PLIN1O60240 522 aa5.26□□□□□ -1.57
USP16-205ENST00000474835 KIF20AO95235 890 aa5.26□□□□□ -1.57
USP16-205ENST00000474835 SLC4A3P48751 1232 aa5.26□□□□□ -1.57
USP16-205ENST00000474835 MAPK8IP2Q13387 824 aaPredicted RBP5.26□□□□□ -1.57
USP16-205ENST00000474835 PABPN1Q86U42 306 aaKnown RBP eCLIP5.26□□□□□ -1.57
USP16-205ENST00000474835 PLEKHF1Q96S99 279 aa5.26□□□□□ -1.57
USP16-205ENST00000474835 FUCA2Q9BTY2 467 aa5.26□□□□□ -1.57
USP16-205ENST00000474835 RPAP1Q9BWH6 1393 aaPredicted RBP5.26□□□□□ -1.57
USP16-205ENST00000474835 CCDC173Q0VFZ6 552 aa5.26□□□□□ -1.57
USP16-205ENST00000474835 ZSCAN30Q86W11 494 aa5.26□□□□□ -1.57
USP16-205ENST00000474835 FAM135BQ49AJ0 1406 aa5.26□□□□□ -1.57
USP16-205ENST00000474835 YTHDC2Q9H6S0 1430 aaKnown RBP5.26□□□□□ -1.57
USP16-205ENST00000474835 RLBP1P12271 317 aa5.25□□□□□ -1.57
USP16-205ENST00000474835 KLHL40Q2TBA0 621 aa5.25□□□□□ -1.57
USP16-205ENST00000474835 CCDC94Q9BW85 323 aaPredicted RBP5.25□□□□□ -1.57
USP16-205ENST00000474835 GTPBP4Q9BZE4 634 aaKnown RBP5.25□□□□□ -1.57
USP16-205ENST00000474835 ZDHHC9Q9Y397 364 aa5.25□□□□□ -1.57
USP16-205ENST00000474835 MTERF4Q7Z6M4 381 aaKnown RBP5.25□□□□□ -1.57
USP16-205ENST00000474835 DNAJC5BQ9UF47 199 aa5.25□□□□□ -1.57
USP16-205ENST00000474835 SALL3Q9BXA9 1300 aa5.25□□□□□ -1.57
USP16-205ENST00000474835 RRP7BPQ9NSQ0 103 aa5.25□□□□□ -1.57
USP16-205ENST00000474835 KIAA0232Q92628 1395 aa5.25□□□□□ -1.57
USP16-205ENST00000474835 TRAK2O60296 914 aa5.24□□□□□ -1.57
USP16-205ENST00000474835 CD2BP2O95400 341 aaKnown RBP5.24□□□□□ -1.57
USP16-205ENST00000474835 TMEM87AQ8NBN3 555 aa5.24□□□□□ -1.57
USP16-205ENST00000474835 MYRIPQ8NFW9 859 aa5.24□□□□□ -1.57
USP16-205ENST00000474835 NSD2O96028 1365 aa5.24□□□□□ -1.57
USP16-205ENST00000474835 CPSF1Q10570 1443 aaKnown RBP5.24□□□□□ -1.57
USP16-205ENST00000474835 ADGRL3Q9HAR2 1447 aa5.24□□□□□ -1.57
USP16-205ENST00000474835 CT47B1P0C2W7 299 aaPredicted RBP5.24□□□□□ -1.57
USP16-205ENST00000474835 RARSP54136 660 aaKnown RBP5.24□□□□□ -1.57
USP16-205ENST00000474835 HMGN5P82970 282 aaKnown RBP5.24□□□□□ -1.57
USP16-205ENST00000474835 VSIG10Q8N0Z9 540 aa5.24□□□□□ -1.57
USP16-205ENST00000474835 CLUAP1Q96AJ1 413 aa5.24□□□□□ -1.57
USP16-205ENST00000474835 LMBRD1Q9NUN5 540 aa5.24□□□□□ -1.57
USP16-205ENST00000474835 CHMP5Q9NZZ3 219 aa5.24□□□□□ -1.57
USP16-205ENST00000474835 GLI3P10071 1580 aa5.24□□□□□ -1.57
USP16-205ENST00000474835 FAM193AP78312 1265 aa5.24□□□□□ -1.57
USP16-205ENST00000474835 NFATC2IPQ8NCF5 419 aa5.24□□□□□ -1.57
USP16-205ENST00000474835 C4AP0C0L4 1744 aa5.24□□□□□ -1.57
USP16-205ENST00000474835 C4BP0C0L5 1744 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms