RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 RDH13Q8NBN7 331 aa6.63□□□□□ -1.35
LRCH3-213ENST00000471667 NLRP7Q8WX94 980 aa6.63□□□□□ -1.35
LRCH3-213ENST00000471667 STRCQ7RTU9 1775 aa6.62□□□□□ -1.35
LRCH3-213ENST00000471667 TTC37Q6PGP7 1564 aa6.62□□□□□ -1.35
LRCH3-213ENST00000471667 SPSB2Q99619 263 aa6.62□□□□□ -1.35
LRCH3-213ENST00000471667 ESF1Q9H501 851 aaKnown RBP6.62□□□□□ -1.35
LRCH3-213ENST00000471667 ZNF335Q9H4Z2 1342 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-213ENST00000471667 DDX11L8A8MPP1 907 aa6.61□□□□□ -1.35
LRCH3-213ENST00000471667 PLA2G2CQ5R387 149 aa6.61□□□□□ -1.35
LRCH3-213ENST00000471667 MORN1Q5T089 497 aa6.61□□□□□ -1.35
LRCH3-213ENST00000471667 ZNF697Q5TEC3 545 aa6.61□□□□□ -1.35
LRCH3-213ENST00000471667 PHOX2BQ99453 314 aa6.61□□□□□ -1.35
LRCH3-213ENST00000471667 ARHGEF40Q8TER5 1519 aa6.6□□□□□ -1.35
LRCH3-213ENST00000471667 HAP1P54257 671 aaPredicted RBP6.6□□□□□ -1.35
LRCH3-213ENST00000471667 PRR20EP86478 221 aa6.6□□□□□ -1.35
LRCH3-213ENST00000471667 PRR20CP86479 221 aa6.6□□□□□ -1.35
LRCH3-213ENST00000471667 PRR20DP86480 221 aa6.6□□□□□ -1.35
LRCH3-213ENST00000471667 PRR20BP86481 221 aa6.6□□□□□ -1.35
LRCH3-213ENST00000471667 PRR20AP86496 221 aa6.6□□□□□ -1.35
LRCH3-213ENST00000471667 FUT2Q10981 343 aa6.6□□□□□ -1.35
LRCH3-213ENST00000471667 ZNF787Q6DD87 383 aa6.6□□□□□ -1.35
LRCH3-213ENST00000471667 GPIHBP1Q8IV16 184 aa6.6□□□□□ -1.35
LRCH3-213ENST00000471667 KIAA0556O60303 1618 aa6.6□□□□□ -1.35
LRCH3-213ENST00000471667 NEO1Q92859 1461 aa6.6□□□□□ -1.35
LRCH3-213ENST00000471667 PTPRKQ15262 1439 aa6.59□□□□□ -1.35
LRCH3-213ENST00000471667 TNFRSF10AO00220 468 aa6.59□□□□□ -1.35
LRCH3-213ENST00000471667 PKDCCQ504Y2 493 aa6.59□□□□□ -1.35
LRCH3-213ENST00000471667 SULF1Q8IWU6 871 aa6.59□□□□□ -1.35
LRCH3-213ENST00000471667 FER1L4A9Z1Z3 1794 aa6.59□□□□□ -1.35
LRCH3-213ENST00000471667 NCOA1Q15788 1441 aa6.59□□□□□ -1.36
LRCH3-213ENST00000471667 GDF9O60383 454 aa6.58□□□□□ -1.36
LRCH3-213ENST00000471667 DGAT1O75907 488 aa6.58□□□□□ -1.36
LRCH3-213ENST00000471667 ATP6V1AP38606 617 aa6.58□□□□□ -1.36
LRCH3-213ENST00000471667 GCGRP47871 477 aa6.58□□□□□ -1.36
LRCH3-213ENST00000471667 CEBPAP49715 358 aaPredicted RBP6.58□□□□□ -1.36
LRCH3-213ENST00000471667 KDM2AQ9Y2K7 1162 aa6.58□□□□□ -1.36
LRCH3-213ENST00000471667 THAP11Q96EK4 314 aa6.57□□□□□ -1.36
LRCH3-213ENST00000471667 RGS17Q9UGC6 210 aaPredicted RBP6.57□□□□□ -1.36
LRCH3-213ENST00000471667 SLC27A5Q9Y2P5 690 aa6.57□□□□□ -1.36
LRCH3-213ENST00000471667 DENND4BO75064 1496 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-213ENST00000471667 FAM187AA6NFU0 413 aa6.56□□□□□ -1.36
LRCH3-213ENST00000471667 FMNL1O95466 1100 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-213ENST00000471667 MYT1Q01538 1121 aa6.56□□□□□ -1.36
LRCH3-213ENST00000471667 EFCAB5A4FU69 1503 aa6.55□□□□□ -1.36
LRCH3-213ENST00000471667 POTEAQ6S8J7 498 aa6.55□□□□□ -1.36
LRCH3-213ENST00000471667 FAM160A2Q8N612 972 aaPredicted RBP6.55□□□□□ -1.36
LRCH3-213ENST00000471667 FCF1Q9Y324 198 aaKnown RBP6.55□□□□□ -1.36
LRCH3-213ENST00000471667 ZFYVE16Q7Z3T8 1539 aa6.55□□□□□ -1.36
LRCH3-213ENST00000471667 RPIAP49247 311 aa6.54□□□□□ -1.36
LRCH3-213ENST00000471667 FOXC1Q12948 553 aa6.54□□□□□ -1.36
LRCH3-213ENST00000471667 PKD2L1Q9P0L9 805 aa6.54□□□□□ -1.36
LRCH3-213ENST00000471667 SALL2Q9Y467 1007 aaPredicted RBP6.54□□□□□ -1.36
LRCH3-213ENST00000471667 CPS1P31327 1500 aa6.54□□□□□ -1.36
LRCH3-213ENST00000471667 MAGI2Q86UL8 1455 aa6.53□□□□□ -1.36
LRCH3-213ENST00000471667 TRAPPC8Q9Y2L5 1435 aa6.53□□□□□ -1.36
LRCH3-213ENST00000471667 GRIPAP1Q4V328 841 aa6.53□□□□□ -1.36
LRCH3-213ENST00000471667 LMOD2Q6P5Q4 547 aa6.53□□□□□ -1.36
LRCH3-213ENST00000471667 BRICD5Q6PL45 260 aa6.53□□□□□ -1.36
LRCH3-213ENST00000471667 PRDM9Q9NQV7 894 aa6.53□□□□□ -1.36
LRCH3-213ENST00000471667 SETD1BQ9UPS6 1966 aaKnown RBP6.53□□□□□ -1.36
LRCH3-213ENST00000471667 IQGAP2Q13576 1575 aa6.52□□□□□ -1.36
LRCH3-213ENST00000471667 CD2BP2O95400 341 aaKnown RBP6.52□□□□□ -1.37
LRCH3-213ENST00000471667 MAP2K5Q13163 448 aa6.52□□□□□ -1.37
LRCH3-213ENST00000471667 RNF19BQ6ZMZ0 732 aa6.52□□□□□ -1.37
LRCH3-213ENST00000471667 ZNF775Q96BV0 537 aaPredicted RBP6.52□□□□□ -1.37
LRCH3-213ENST00000471667 ARHGEF12Q9NZN5 1544 aa6.51□□□□□ -1.37
LRCH3-213ENST00000471667 CAMSAP1Q5T5Y3 1602 aa6.51□□□□□ -1.37
LRCH3-213ENST00000471667 MSS51Q4VC12 460 aa6.51□□□□□ -1.37
LRCH3-213ENST00000471667 FHOD3Q2V2M9 1422 aa6.5□□□□□ -1.37
LRCH3-213ENST00000471667 FRMPD1Q5SYB0 1578 aa6.5□□□□□ -1.37
LRCH3-213ENST00000471667 POTECB2RU33 542 aa6.5□□□□□ -1.37
LRCH3-213ENST00000471667 TULP1O00294 542 aaPredicted RBP6.5□□□□□ -1.37
LRCH3-213ENST00000471667 ST8SIA5O15466 376 aa6.5□□□□□ -1.37
LRCH3-213ENST00000471667 CD46P15529 392 aa6.5□□□□□ -1.37
LRCH3-213ENST00000471667 Q3C1V9 767 aa6.5□□□□□ -1.37
LRCH3-213ENST00000471667 C9orf84Q5VXU9 1444 aa6.5□□□□□ -1.37
LRCH3-213ENST00000471667 IRF6O14896 467 aa6.49□□□□□ -1.37
LRCH3-213ENST00000471667 MDM2Q00987 491 aaPredicted RBP6.49□□□□□ -1.37
LRCH3-213ENST00000471667 AAASQ9NRG9 546 aa6.49□□□□□ -1.37
LRCH3-213ENST00000471667 ABCA9Q8IUA7 1624 aa6.48□□□□□ -1.37
LRCH3-213ENST00000471667 KDM4AO75164 1064 aa6.48□□□□□ -1.37
LRCH3-213ENST00000471667 ZNF772Q68DY9 489 aaPredicted RBP6.48□□□□□ -1.37
LRCH3-213ENST00000471667 CYP4X1Q8N118 509 aa6.48□□□□□ -1.37
LRCH3-213ENST00000471667 TRIM52Q96A61 297 aa6.48□□□□□ -1.37
LRCH3-213ENST00000471667 TOR4AQ9NXH8 423 aa6.48□□□□□ -1.37
LRCH3-213ENST00000471667 DISP1Q96F81 1524 aa6.48□□□□□ -1.37
LRCH3-213ENST00000471667 MINK1Q8N4C8 1332 aaPredicted RBP6.48□□□□□ -1.37
LRCH3-213ENST00000471667 SETD1AO15047 1707 aaKnown RBP6.47□□□□□ -1.37
LRCH3-213ENST00000471667 PLA2R1Q13018 1463 aa6.47□□□□□ -1.37
LRCH3-213ENST00000471667 ZMYM4Q5VZL5 1548 aa6.47□□□□□ -1.37
LRCH3-213ENST00000471667 ZBTB24O43167 697 aaPredicted RBP6.47□□□□□ -1.37
LRCH3-213ENST00000471667 VSIG10Q8N0Z9 540 aa6.47□□□□□ -1.37
LRCH3-213ENST00000471667 CFAP74Q9C0B2 1584 aa6.47□□□□□ -1.37
LRCH3-213ENST00000471667 ATP10AO60312 1499 aa6.47□□□□□ -1.37
LRCH3-213ENST00000471667 BIVM-ERCC5R4GMW8 1640 aa6.47□□□□□ -1.37
LRCH3-213ENST00000471667 MMP16P51512 607 aa6.46□□□□□ -1.38
LRCH3-213ENST00000471667 KIF27Q86VH2 1401 aa6.46□□□□□ -1.38
LRCH3-213ENST00000471667 CCDC102AQ96A19 550 aa6.46□□□□□ -1.38
LRCH3-213ENST00000471667 USB1Q9BQ65 265 aaKnown RBP6.46□□□□□ -1.38
LRCH3-213ENST00000471667 CNTLNQ9NXG0 1405 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms