RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 SPATA31A7Q8IWB4 1347 aa10.28□□□□□ -0.76
HDAC1-204ENST00000471488 TECPR2O15040 1411 aa10.27□□□□□ -0.77
HDAC1-204ENST00000471488 NUTM2GQ5VZR2 741 aa10.27□□□□□ -0.77
HDAC1-204ENST00000471488 NGDNQ8NEJ9 315 aaKnown RBP10.27□□□□□ -0.77
HDAC1-204ENST00000471488 SPON1Q9HCB6 807 aa10.27□□□□□ -0.77
HDAC1-204ENST00000471488 NRXN1Q9ULB1 1477 aa10.27□□□□□ -0.77
HDAC1-204ENST00000471488 NRAPQ86VF7 1730 aa10.27□□□□□ -0.77
HDAC1-204ENST00000471488 TNS1Q9HBL0 1735 aaKnown RBP10.27□□□□□ -0.77
HDAC1-204ENST00000471488 DHX57Q6P158 1386 aaKnown RBP10.26□□□□□ -0.77
HDAC1-204ENST00000471488 ANKRD30BQ9BXX2 1392 aa10.26□□□□□ -0.77
HDAC1-204ENST00000471488 SENP3-EIF4A1A0A087X0R7 540 aa10.26□□□□□ -0.77
HDAC1-204ENST00000471488 ZBTB7CA1YPR0 619 aa10.26□□□□□ -0.77
HDAC1-204ENST00000471488 ZC3H6P61129 1189 aaKnown RBP10.26□□□□□ -0.77
HDAC1-204ENST00000471488 CFAP70Q5T0N1 1121 aa10.26□□□□□ -0.77
HDAC1-204ENST00000471488 MINK1Q8N4C8 1332 aaPredicted RBP10.26□□□□□ -0.77
HDAC1-204ENST00000471488 COL14A1Q05707 1796 aaKnown RBP10.26□□□□□ -0.77
HDAC1-204ENST00000471488 KNDC1Q76NI1 1749 aa10.25□□□□□ -0.77
HDAC1-204ENST00000471488 KCNQ2O43526 872 aa10.24□□□□□ -0.77
HDAC1-204ENST00000471488 TRAK1Q9UPV9 953 aa10.24□□□□□ -0.77
HDAC1-204ENST00000471488 SPATA31A1Q5TZJ5 1347 aa10.24□□□□□ -0.77
HDAC1-204ENST00000471488 ACIN1Q9UKV3 1341 aaKnown RBP10.23□□□□□ -0.77
HDAC1-204ENST00000471488 KIAA0232Q92628 1395 aa10.23□□□□□ -0.77
HDAC1-204ENST00000471488 DISP2A7MBM2 1401 aa10.23□□□□□ -0.77
HDAC1-204ENST00000471488 PIK3C2GO75747 1445 aa10.23□□□□□ -0.77
HDAC1-204ENST00000471488 THSD7AQ9UPZ6 1657 aa10.22□□□□□ -0.77
HDAC1-204ENST00000471488 PARD3Q8TEW0 1356 aa10.21□□□□□ -0.78
HDAC1-204ENST00000471488 CAMTA1Q9Y6Y1 1673 aa10.21□□□□□ -0.78
HDAC1-204ENST00000471488 ZBTB7AO95365 584 aa10.2□□□□□ -0.78
HDAC1-204ENST00000471488 NUP188Q5SRE5 1749 aa10.2□□□□□ -0.78
HDAC1-204ENST00000471488 BCL11BQ9C0K0 894 aaPredicted RBP10.2□□□□□ -0.78
HDAC1-204ENST00000471488 C14orf93Q9H972 538 aaKnown RBP10.2□□□□□ -0.78
HDAC1-204ENST00000471488 KDM2AQ9Y2K7 1162 aa10.2□□□□□ -0.78
HDAC1-204ENST00000471488 TRPM3Q9HCF6 1732 aaPredicted RBP10.19□□□□□ -0.78
HDAC1-204ENST00000471488 SPATA31E1Q6ZUB1 1445 aa10.19□□□□□ -0.78
HDAC1-204ENST00000471488 ANKARQ7Z5J8 1434 aa10.19□□□□□ -0.78
HDAC1-204ENST00000471488 NINLQ9Y2I6 1382 aa10.19□□□□□ -0.78
HDAC1-204ENST00000471488 PRR36Q9H6K5 1346 aa10.19□□□□□ -0.78
HDAC1-204ENST00000471488 LARP1Q6PKG0 1096 aaKnown RBP10.19□□□□□ -0.78
HDAC1-204ENST00000471488 ZNF784Q8NCA9 323 aaPredicted RBP10.19□□□□□ -0.78
HDAC1-204ENST00000471488 SIRT1Q96EB6 747 aa10.19□□□□□ -0.78
HDAC1-204ENST00000471488 MPHOSPH9Q99550 1183 aa10.19□□□□□ -0.78
HDAC1-204ENST00000471488 ATF5Q9Y2D1 282 aaPredicted RBP10.19□□□□□ -0.78
HDAC1-204ENST00000471488 ALS2Q96Q42 1657 aa10.18□□□□□ -0.78
HDAC1-204ENST00000471488 EIF3AQ14152 1382 aaKnown RBP10.17□□□□□ -0.78
HDAC1-204ENST00000471488 WASLO00401 505 aaPredicted RBP10.17□□□□□ -0.78
HDAC1-204ENST00000471488 TCP11L2Q8N4U5 519 aa10.17□□□□□ -0.78
HDAC1-204ENST00000471488 RREB1Q92766 1687 aa10.17□□□□□ -0.78
HDAC1-204ENST00000471488 KLHL34Q8N239 644 aa10.16□□□□□ -0.78
HDAC1-204ENST00000471488 ABTB2Q8N961 1025 aa10.16□□□□□ -0.78
HDAC1-204ENST00000471488 PDGFDQ9GZP0 370 aaPredicted RBP10.16□□□□□ -0.78
HDAC1-204ENST00000471488 SSH2Q76I76 1423 aa10.16□□□□□ -0.78
HDAC1-204ENST00000471488 NRKQ7Z2Y5 1582 aa10.15□□□□□ -0.78
HDAC1-204ENST00000471488 BARGINQ6ZT62 677 aa10.15□□□□□ -0.78
HDAC1-204ENST00000471488 PELP1Q8IZL8 1130 aaKnown RBP10.15□□□□□ -0.78
HDAC1-204ENST00000471488 NUDT16Q96DE0 195 aaKnown RBP10.15□□□□□ -0.78
HDAC1-204ENST00000471488 ANO8Q9HCE9 1232 aaPredicted RBP10.15□□□□□ -0.78
HDAC1-204ENST00000471488 TULP4Q9NRJ4 1543 aa10.15□□□□□ -0.78
HDAC1-204ENST00000471488 C1QTNF8P60827 252 aa10.14□□□□□ -0.79
HDAC1-204ENST00000471488 FHDC1Q9C0D6 1143 aaPredicted RBP10.14□□□□□ -0.79
HDAC1-204ENST00000471488 STK32BQ9NY57 414 aa10.14□□□□□ -0.79
HDAC1-204ENST00000471488 PHRF1Q9P1Y6 1649 aaKnown RBP10.14□□□□□ -0.79
HDAC1-204ENST00000471488 DDB1Q16531 1140 aa10.13□□□□□ -0.79
HDAC1-204ENST00000471488 CRYBG1Q9Y4K1 1723 aa10.13□□□□□ -0.79
HDAC1-204ENST00000471488 GPR162Q16538 588 aa10.12□□□□□ -0.79
HDAC1-204ENST00000471488 TOM1L2Q6ZVM7 507 aa10.12□□□□□ -0.79
HDAC1-204ENST00000471488 PTF1AQ7RTS3 328 aa10.12□□□□□ -0.79
HDAC1-204ENST00000471488 DCAF11Q8TEB1 546 aa10.12□□□□□ -0.79
HDAC1-204ENST00000471488 OVOS2A0A0G2JMS6 1433 aa10.12□□□□□ -0.79
HDAC1-204ENST00000471488 OVOS2A0A0J9YW53 1432 aa10.12□□□□□ -0.79
HDAC1-204ENST00000471488 OVOS2Q6IE36 1432 aa10.12□□□□□ -0.79
HDAC1-204ENST00000471488 DLC1Q96QB1 1528 aa10.12□□□□□ -0.79
HDAC1-204ENST00000471488 MYOM1P52179 1685 aa10.12□□□□□ -0.79
HDAC1-204ENST00000471488 ACEP12821 1306 aa10.11□□□□□ -0.79
HDAC1-204ENST00000471488 IFFO2Q5TF58 517 aa10.11□□□□□ -0.79
HDAC1-204ENST00000471488 CDK19Q9BWU1 502 aa10.11□□□□□ -0.79
HDAC1-204ENST00000471488 THRAP3Q9Y2W1 955 aaKnown RBP10.11□□□□□ -0.79
HDAC1-204ENST00000471488 SOX12O15370 315 aa10.1□□□□□ -0.79
HDAC1-204ENST00000471488 GIGYF1O75420 1035 aaPredicted RBP10.1□□□□□ -0.79
HDAC1-204ENST00000471488 SYT17Q9BSW7 474 aa10.1□□□□□ -0.79
HDAC1-204ENST00000471488 ITSN1Q15811 1721 aa10.1□□□□□ -0.79
HDAC1-204ENST00000471488 ATP7BP35670 1465 aa10.1□□□□□ -0.79
HDAC1-204ENST00000471488 C11orf95C9JLR9 678 aaPredicted RBP10.09□□□□□ -0.79
HDAC1-204ENST00000471488 PLSCR1O15162 318 aa10.09□□□□□ -0.79
HDAC1-204ENST00000471488 CSB-PGBD3P0DP91 1061 aa10.09□□□□□ -0.79
HDAC1-204ENST00000471488 PTGER2P43116 358 aa10.09□□□□□ -0.79
HDAC1-204ENST00000471488 SRPK2P78362 688 aaKnown RBP10.09□□□□□ -0.79
HDAC1-204ENST00000471488 NLRP13Q86W25 1043 aa10.09□□□□□ -0.79
HDAC1-204ENST00000471488 GCP02774 474 aa10.08□□□□□ -0.8
HDAC1-204ENST00000471488 CRB1P82279 1406 aa10.07□□□□□ -0.8
HDAC1-204ENST00000471488 ADGRB1O14514 1584 aa10.07□□□□□ -0.8
HDAC1-204ENST00000471488 COL5A2P05997 1499 aaPredicted RBP10.07□□□□□ -0.8
HDAC1-204ENST00000471488 NLRP6P59044 892 aa10.07□□□□□ -0.8
HDAC1-204ENST00000471488 SLC15A2Q16348 729 aa10.07□□□□□ -0.8
HDAC1-204ENST00000471488 TXNRD1Q16881 649 aa10.07□□□□□ -0.8
HDAC1-204ENST00000471488 ACSBG1Q96GR2 724 aa10.07□□□□□ -0.8
HDAC1-204ENST00000471488 CASZ1Q86V15 1759 aa10.06□□□□□ -0.8
HDAC1-204ENST00000471488 PROM2Q8N271 834 aa10.06□□□□□ -0.8
HDAC1-204ENST00000471488 MARCH10Q8NA82 808 aaPredicted RBP10.06□□□□□ -0.8
HDAC1-204ENST00000471488 ARXQ96QS3 562 aa10.06□□□□□ -0.8
HDAC1-204ENST00000471488 MTFR1LQ9H019 292 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms