RNA–Protein interactions for RNA: ENST00000470160.1

KDM3A-210, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 2,955 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-210ENST00000470160 PRR36Q9H6K5 1346 aa9.41□□□□□ -0.9
KDM3A-210ENST00000470160 NUDT16Q96DE0 195 aaKnown RBP9.4□□□□□ -0.9
KDM3A-210ENST00000470160 NUDCQ9Y266 331 aa9.4□□□□□ -0.9
KDM3A-210ENST00000470160 MORC1Q86VD1 984 aa9.4□□□□□ -0.9
KDM3A-210ENST00000470160 CDK12Q9NYV4 1490 aaPredicted RBP9.39□□□□□ -0.91
KDM3A-210ENST00000470160 USP31Q70CQ4 1352 aa9.39□□□□□ -0.91
KDM3A-210ENST00000470160 CABP1Q9NZU7 370 aa9.39□□□□□ -0.91
KDM3A-210ENST00000470160 OVOS2A0A0J9YW53 1432 aa9.39□□□□□ -0.91
KDM3A-210ENST00000470160 OVOS2Q6IE36 1432 aa9.39□□□□□ -0.91
KDM3A-210ENST00000470160 ADAMTS8Q9UP79 889 aa9.39□□□□□ -0.91
KDM3A-210ENST00000470160 USP6P35125 1406 aa9.39□□□□□ -0.91
KDM3A-210ENST00000470160 PHF23Q9BUL5 403 aaPredicted RBP9.39□□□□□ -0.91
KDM3A-210ENST00000470160 ADGRL3Q9HAR2 1447 aa9.38□□□□□ -0.91
KDM3A-210ENST00000470160 PHRF1Q9P1Y6 1649 aaKnown RBP9.38□□□□□ -0.91
KDM3A-210ENST00000470160 MST1RQ04912 1400 aa9.38□□□□□ -0.91
KDM3A-210ENST00000470160 TRMT2AQ8IZ69 625 aaKnown RBP9.38□□□□□ -0.91
KDM3A-210ENST00000470160 RGPD1P0DJD0 1748 aa9.37□□□□□ -0.91
KDM3A-210ENST00000470160 TTC21AQ8NDW8 1320 aa9.37□□□□□ -0.91
KDM3A-210ENST00000470160 SAFB2Q14151 953 aaKnown RBP eCLIP9.37□□□□□ -0.91
KDM3A-210ENST00000470160 CCDC27Q2M243 656 aa9.37□□□□□ -0.91
KDM3A-210ENST00000470160 KIF1AQ12756 1690 aa9.37□□□□□ -0.91
KDM3A-210ENST00000470160 PIK3C2AO00443 1686 aa9.36□□□□□ -0.91
KDM3A-210ENST00000470160 WDR43Q15061 677 aaKnown RBP eCLIP9.36□□□□□ -0.91
KDM3A-210ENST00000470160 SLC26A8Q96RN1 970 aa9.36□□□□□ -0.91
KDM3A-210ENST00000470160 SUPT16HQ9Y5B9 1047 aaKnown RBP9.36□□□□□ -0.91
KDM3A-210ENST00000470160 KCNA6P17658 529 aa9.36□□□□□ -0.91
KDM3A-210ENST00000470160 CFAP53Q96M91 514 aa9.36□□□□□ -0.91
KDM3A-210ENST00000470160 DCCP43146 1447 aa9.35□□□□□ -0.91
KDM3A-210ENST00000470160 STRCP1A6NGW2 1772 aa9.35□□□□□ -0.91
KDM3A-210ENST00000470160 KIF24Q5T7B8 1368 aa9.35□□□□□ -0.91
KDM3A-210ENST00000470160 MTHFSP49914 203 aa9.35□□□□□ -0.91
KDM3A-210ENST00000470160 STRCQ7RTU9 1775 aa9.35□□□□□ -0.91
KDM3A-210ENST00000470160 TRPM3Q9HCF6 1732 aaPredicted RBP9.34□□□□□ -0.92
KDM3A-210ENST00000470160 ARXQ96QS3 562 aa9.33□□□□□ -0.92
KDM3A-210ENST00000470160 TTC21BQ7Z4L5 1316 aa9.33□□□□□ -0.92
KDM3A-210ENST00000470160 RUNDC1Q96C34 613 aa9.33□□□□□ -0.92
KDM3A-210ENST00000470160 PEAK1Q9H792 1746 aa9.33□□□□□ -0.92
KDM3A-210ENST00000470160 BCANQ96GW7 911 aa9.33□□□□□ -0.92
KDM3A-210ENST00000470160 ACEP12821 1306 aa9.32□□□□□ -0.92
KDM3A-210ENST00000470160 LMTK3Q96Q04 1460 aa9.32□□□□□ -0.92
KDM3A-210ENST00000470160 XIRP1Q702N8 1843 aaKnown RBP9.32□□□□□ -0.92
KDM3A-210ENST00000470160 PLEKHF1Q96S99 279 aa9.32□□□□□ -0.92
KDM3A-210ENST00000470160 GGNBP2Q9H3C7 697 aa9.31□□□□□ -0.92
KDM3A-210ENST00000470160 POLKQ9UBT6 870 aa9.31□□□□□ -0.92
KDM3A-210ENST00000470160 TULP1O00294 542 aaPredicted RBP9.3□□□□□ -0.92
KDM3A-210ENST00000470160 SLFN5Q08AF3 891 aa9.3□□□□□ -0.92
KDM3A-210ENST00000470160 PNNQ9H307 717 aaKnown RBP9.3□□□□□ -0.92
KDM3A-210ENST00000470160 WDR63Q8IWG1 891 aa9.3□□□□□ -0.92
KDM3A-210ENST00000470160 DUSP27Q5VZP5 1158 aa9.3□□□□□ -0.92
KDM3A-210ENST00000470160 SLIT3O75094 1523 aa9.29□□□□□ -0.92
KDM3A-210ENST00000470160 ALS2Q96Q42 1657 aa9.29□□□□□ -0.92
KDM3A-210ENST00000470160 NEFLP07196 543 aa9.29□□□□□ -0.92
KDM3A-210ENST00000470160 FCHSD2O94868 740 aa9.29□□□□□ -0.92
KDM3A-210ENST00000470160 GOLGA2Q08379 1002 aa9.29□□□□□ -0.92
KDM3A-210ENST00000470160 CNGB1Q14028 1251 aaPredicted RBP9.29□□□□□ -0.92
KDM3A-210ENST00000470160 COG3Q96JB2 828 aa9.29□□□□□ -0.92
KDM3A-210ENST00000470160 IL16Q14005 1332 aa9.28□□□□□ -0.92
KDM3A-210ENST00000470160 NFAT5O94916 1531 aa9.28□□□□□ -0.92
KDM3A-210ENST00000470160 E9PSI1 815 aa9.28□□□□□ -0.92
KDM3A-210ENST00000470160 DIAPH1O60610 1272 aaKnown RBP9.28□□□□□ -0.92
KDM3A-210ENST00000470160 IL13P35225 146 aa9.28□□□□□ -0.92
KDM3A-210ENST00000470160 NME9Q86XW9 330 aa9.28□□□□□ -0.92
KDM3A-210ENST00000470160 NCKAP5LQ9HCH0 1330 aa9.27□□□□□ -0.92
KDM3A-210ENST00000470160 CAMTA1Q9Y6Y1 1673 aa9.27□□□□□ -0.92
KDM3A-210ENST00000470160 ABCC6O95255 1503 aa9.27□□□□□ -0.92
KDM3A-210ENST00000470160 DLG5Q8TDM6 1919 aa9.27□□□□□ -0.93
KDM3A-210ENST00000470160 KDM4FA0A1W2PPD8 638 aa9.27□□□□□ -0.93
KDM3A-210ENST00000470160 CRYBG1Q9Y4K1 1723 aa9.27□□□□□ -0.93
KDM3A-210ENST00000470160 RTL1A6NKG5 1358 aa9.27□□□□□ -0.93
KDM3A-210ENST00000470160 APAF1O14727 1248 aa9.27□□□□□ -0.93
KDM3A-210ENST00000470160 FKBP8Q14318 412 aa9.27□□□□□ -0.93
KDM3A-210ENST00000470160 WWC1Q8IX03 1113 aa9.27□□□□□ -0.93
KDM3A-210ENST00000470160 LTN1O94822 1766 aa9.26□□□□□ -0.93
KDM3A-210ENST00000470160 SENP3Q9H4L4 574 aaPredicted RBP9.26□□□□□ -0.93
KDM3A-210ENST00000470160 SBNO1A3KN83 1393 aa9.26□□□□□ -0.93
KDM3A-210ENST00000470160 TCP11L2Q8N4U5 519 aa9.25□□□□□ -0.93
KDM3A-210ENST00000470160 RSPH6AQ9H0K4 717 aa9.25□□□□□ -0.93
KDM3A-210ENST00000470160 RCAN3Q9UKA8 241 aa9.25□□□□□ -0.93
KDM3A-210ENST00000470160 C1orf167Q5SNV9 1468 aa9.25□□□□□ -0.93
KDM3A-210ENST00000470160 MED1Q15648 1581 aaPredicted RBP9.25□□□□□ -0.93
KDM3A-210ENST00000470160 NCAPD2Q15021 1401 aa9.25□□□□□ -0.93
KDM3A-210ENST00000470160 CT47B1P0C2W7 299 aaPredicted RBP9.25□□□□□ -0.93
KDM3A-210ENST00000470160 CDCA7LQ96GN5 454 aa9.25□□□□□ -0.93
KDM3A-210ENST00000470160 KDRP35968 1356 aa9.25□□□□□ -0.93
KDM3A-210ENST00000470160 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.24□□□□□ -0.93
KDM3A-210ENST00000470160 ARHGEF10O15013 1369 aa9.24□□□□□ -0.93
KDM3A-210ENST00000470160 RRP1P56182 461 aaKnown RBP9.24□□□□□ -0.93
KDM3A-210ENST00000470160 PPP4R2Q9NY27 417 aa9.24□□□□□ -0.93
KDM3A-210ENST00000470160 PHF8Q9UPP1 1060 aa9.24□□□□□ -0.93
KDM3A-210ENST00000470160 C19orf44Q9H6X5 657 aa9.24□□□□□ -0.93
KDM3A-210ENST00000470160 PLEKHG2Q9H7P9 1386 aa9.24□□□□□ -0.93
KDM3A-210ENST00000470160 FLT4P35916 1363 aa9.23□□□□□ -0.93
KDM3A-210ENST00000470160 LMO7Q8WWI1 1683 aa9.23□□□□□ -0.93
KDM3A-210ENST00000470160 LRRC37A3O60309 1634 aa9.23□□□□□ -0.93
KDM3A-210ENST00000470160 TMPOP42166 694 aaKnown RBP9.22□□□□□ -0.93
KDM3A-210ENST00000470160 TNNT2P45379 298 aaPredicted RBP9.22□□□□□ -0.93
KDM3A-210ENST00000470160 CCDC146Q8IYE0 955 aa9.22□□□□□ -0.93
KDM3A-210ENST00000470160 ZRANB1Q9UGI0 708 aa9.22□□□□□ -0.93
KDM3A-210ENST00000470160 USP19O94966 1318 aa9.22□□□□□ -0.93
KDM3A-210ENST00000470160 U2AF1L5P0DN76 240 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms