RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 SALL2Q9Y467 1007 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-207ENST00000468925 RB1CC1Q8TDY2 1594 aa6.62□□□□□ -1.35
SF3B1-207ENST00000468925 EEA1Q15075 1411 aa6.62□□□□□ -1.35
SF3B1-207ENST00000468925 GSK3AP49840 483 aa6.62□□□□□ -1.35
SF3B1-207ENST00000468925 TRIM32Q13049 653 aa6.62□□□□□ -1.35
SF3B1-207ENST00000468925 XP32Q5T750 250 aa6.62□□□□□ -1.35
SF3B1-207ENST00000468925 TOR4AQ9NXH8 423 aa6.62□□□□□ -1.35
SF3B1-207ENST00000468925 NOP58Q9Y2X3 529 aaKnown RBP6.62□□□□□ -1.35
SF3B1-207ENST00000468925 GMPRP36959 345 aa6.61□□□□□ -1.35
SF3B1-207ENST00000468925 KCTD17Q8N5Z5 321 aa6.61□□□□□ -1.35
SF3B1-207ENST00000468925 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.6□□□□□ -1.35
SF3B1-207ENST00000468925 C6orf229H3BNL8 230 aa6.6□□□□□ -1.35
SF3B1-207ENST00000468925 DXOO77932 396 aaKnown RBP6.6□□□□□ -1.35
SF3B1-207ENST00000468925 NDUFV2P19404 249 aa6.6□□□□□ -1.35
SF3B1-207ENST00000468925 MMP16P51512 607 aa6.6□□□□□ -1.35
SF3B1-207ENST00000468925 USP46P62068 366 aa6.6□□□□□ -1.35
SF3B1-207ENST00000468925 TNIKQ9UKE5 1360 aa6.59□□□□□ -1.35
SF3B1-207ENST00000468925 SSTR3P32745 418 aaPredicted RBP6.59□□□□□ -1.35
SF3B1-207ENST00000468925 MRGPRX2Q96LB1 330 aa6.59□□□□□ -1.35
SF3B1-207ENST00000468925 TRIM47Q96LD4 638 aa6.59□□□□□ -1.35
SF3B1-207ENST00000468925 J3QL48 77 aa6.58□□□□□ -1.36
SF3B1-207ENST00000468925 FDX1P10109 184 aa6.58□□□□□ -1.36
SF3B1-207ENST00000468925 ZC3H15Q8WU90 426 aaKnown RBP6.58□□□□□ -1.36
SF3B1-207ENST00000468925 CCDC136Q96JN2 1154 aa6.58□□□□□ -1.36
SF3B1-207ENST00000468925 ATP13A2Q9NQ11 1180 aa6.58□□□□□ -1.36
SF3B1-207ENST00000468925 PCDHGC3Q9UN70 934 aa6.58□□□□□ -1.36
SF3B1-207ENST00000468925 PPM1GO15355 546 aaPredicted RBP6.57□□□□□ -1.36
SF3B1-207ENST00000468925 JUNDP17535 347 aa6.57□□□□□ -1.36
SF3B1-207ENST00000468925 ANP32AP39687 249 aaKnown RBP6.57□□□□□ -1.36
SF3B1-207ENST00000468925 SKOR1P84550 965 aa6.57□□□□□ -1.36
SF3B1-207ENST00000468925 KCNMA1Q12791 1236 aa6.57□□□□□ -1.36
SF3B1-207ENST00000468925 BARGINQ6ZT62 677 aa6.57□□□□□ -1.36
SF3B1-207ENST00000468925 KRTAP9-2Q9BYQ4 174 aa6.57□□□□□ -1.36
SF3B1-207ENST00000468925 PPP4R2Q9NY27 417 aa6.57□□□□□ -1.36
SF3B1-207ENST00000468925 CCDC9Q9Y3X0 531 aaKnown RBP6.57□□□□□ -1.36
SF3B1-207ENST00000468925 WASHC2AQ641Q2 1341 aa6.56□□□□□ -1.36
SF3B1-207ENST00000468925 WASHC2CQ9Y4E1 1318 aa6.56□□□□□ -1.36
SF3B1-207ENST00000468925 MOXD2PA6NHM9 499 aa6.56□□□□□ -1.36
SF3B1-207ENST00000468925 WNT7AO00755 349 aa6.56□□□□□ -1.36
SF3B1-207ENST00000468925 SMPD1P17405 629 aa6.56□□□□□ -1.36
SF3B1-207ENST00000468925 NEUROD2Q15784 382 aa6.56□□□□□ -1.36
SF3B1-207ENST00000468925 GIGYF2Q6Y7W6 1299 aaKnown RBP6.56□□□□□ -1.36
SF3B1-207ENST00000468925 SPIRE2Q8WWL2 714 aa6.56□□□□□ -1.36
SF3B1-207ENST00000468925 NUDT12Q9BQG2 462 aa6.56□□□□□ -1.36
SF3B1-207ENST00000468925 LINC01559Q495D7 138 aa6.55□□□□□ -1.36
SF3B1-207ENST00000468925 RC3H1Q5TC82 1133 aaKnown RBP6.55□□□□□ -1.36
SF3B1-207ENST00000468925 PTCRAQ6ISU1 281 aaPredicted RBP6.55□□□□□ -1.36
SF3B1-207ENST00000468925 RETREG3Q86VR2 466 aa6.55□□□□□ -1.36
SF3B1-207ENST00000468925 SNIP1Q8TAD8 396 aaKnown RBP6.55□□□□□ -1.36
SF3B1-207ENST00000468925 IPO9Q96P70 1041 aaKnown RBP6.55□□□□□ -1.36
SF3B1-207ENST00000468925 KRTAP9-6A0A140TA67 174 aa6.54□□□□□ -1.36
SF3B1-207ENST00000468925 ZMYND10O75800 440 aa6.54□□□□□ -1.36
SF3B1-207ENST00000468925 BEGAINQ9BUH8 593 aa6.54□□□□□ -1.36
SF3B1-207ENST00000468925 CEP162Q5TB80 1403 aa6.53□□□□□ -1.36
SF3B1-207ENST00000468925 ALDH1A1P00352 501 aa6.53□□□□□ -1.36
SF3B1-207ENST00000468925 MS4A1P11836 297 aa6.53□□□□□ -1.36
SF3B1-207ENST00000468925 CSPP1Q1MSJ5 1256 aa6.53□□□□□ -1.36
SF3B1-207ENST00000468925 SLC16A10Q8TF71 515 aa6.53□□□□□ -1.36
SF3B1-207ENST00000468925 HPS1Q92902 700 aa6.53□□□□□ -1.36
SF3B1-207ENST00000468925 ARID3AQ99856 593 aa6.53□□□□□ -1.36
SF3B1-207ENST00000468925 ZMYND15Q9H091 742 aa6.53□□□□□ -1.36
SF3B1-207ENST00000468925 FAM43AQ8N2R8 423 aa6.52□□□□□ -1.37
SF3B1-207ENST00000468925 PRR7Q8TB68 274 aa6.52□□□□□ -1.37
SF3B1-207ENST00000468925 SENP2Q9HC62 589 aa6.52□□□□□ -1.37
SF3B1-207ENST00000468925 RRP9O43818 475 aaKnown RBP6.51□□□□□ -1.37
SF3B1-207ENST00000468925 AMHR2Q16671 573 aa6.51□□□□□ -1.37
SF3B1-207ENST00000468925 PARP9Q8IXQ6 854 aa6.51□□□□□ -1.37
SF3B1-207ENST00000468925 EHBP1Q8NDI1 1231 aa6.51□□□□□ -1.37
SF3B1-207ENST00000468925 TBC1D2Q9BYX2 928 aa6.51□□□□□ -1.37
SF3B1-207ENST00000468925 NXF1Q9UBU9 619 aaKnown RBP6.51□□□□□ -1.37
SF3B1-207ENST00000468925 RSF1Q96T23 1441 aaPredicted RBP6.5□□□□□ -1.37
SF3B1-207ENST00000468925 ZBTB7CA1YPR0 619 aa6.5□□□□□ -1.37
SF3B1-207ENST00000468925 CCNYL3P0C7X3 344 aa6.5□□□□□ -1.37
SF3B1-207ENST00000468925 IRF7Q92985 503 aa6.5□□□□□ -1.37
SF3B1-207ENST00000468925 PCDHB15Q9Y5E8 787 aa6.5□□□□□ -1.37
SF3B1-207ENST00000468925 TRIM66O15016 1216 aa6.49□□□□□ -1.37
SF3B1-207ENST00000468925 ANP32CO43423 234 aa6.49□□□□□ -1.37
SF3B1-207ENST00000468925 CTHP32929 405 aa6.49□□□□□ -1.37
SF3B1-207ENST00000468925 WNT7BP56706 349 aa6.49□□□□□ -1.37
SF3B1-207ENST00000468925 MTMR2Q13614 643 aa6.49□□□□□ -1.37
SF3B1-207ENST00000468925 TSC1Q92574 1164 aa6.49□□□□□ -1.37
SF3B1-207ENST00000468925 UNC93B1Q9H1C4 597 aa6.49□□□□□ -1.37
SF3B1-207ENST00000468925 C1orf115Q9H7X2 142 aa6.49□□□□□ -1.37
SF3B1-207ENST00000468925 SH3BP2P78314 561 aa6.48□□□□□ -1.37
SF3B1-207ENST00000468925 KRTAP1-3Q8IUG1 177 aa6.48□□□□□ -1.37
SF3B1-207ENST00000468925 NPAS3Q8IXF0 933 aa6.48□□□□□ -1.37
SF3B1-207ENST00000468925 CABLES1Q8TDN4 633 aa6.48□□□□□ -1.37
SF3B1-207ENST00000468925 BAP1Q92560 729 aa6.48□□□□□ -1.37
SF3B1-207ENST00000468925 TLL2Q9Y6L7 1015 aa6.48□□□□□ -1.37
SF3B1-207ENST00000468925 ERBB4Q15303 1308 aa6.48□□□□□ -1.37
SF3B1-207ENST00000468925 CUX2O14529 1486 aa6.47□□□□□ -1.37
SF3B1-207ENST00000468925 CECR2Q9BXF3 1484 aa6.47□□□□□ -1.37
SF3B1-207ENST00000468925 BMP1P13497 986 aa6.47□□□□□ -1.37
SF3B1-207ENST00000468925 KIFC2Q96AC6 838 aa6.47□□□□□ -1.37
SF3B1-207ENST00000468925 WASF2Q9Y6W5 498 aa6.47□□□□□ -1.37
SF3B1-207ENST00000468925 DHX57Q6P158 1386 aaKnown RBP6.46□□□□□ -1.37
SF3B1-207ENST00000468925 CFAP99D6REC4 459 aa6.46□□□□□ -1.38
SF3B1-207ENST00000468925 NCLP19338 710 aaKnown RBP6.46□□□□□ -1.38
SF3B1-207ENST00000468925 PTPRNQ16849 979 aa6.46□□□□□ -1.38
SF3B1-207ENST00000468925 RSBN1LQ6PCB5 846 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms