RNA–Protein interactions for RNA: ENST00000467908.1

PDXK-209, Transcript of pyridoxal kinase, human

TSL 3 BASIC

Gene PDXK, Length 7,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDXK-209	ENST00000467908	SHROOM2	Q13796	1616 aa		13.93	□□□□□ -0.18
PDXK-209	ENST00000467908	SPDYE4	A6NLX3	237 aa		13.93	□□□□□ -0.18
PDXK-209	ENST00000467908	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.93	□□□□□ -0.18
PDXK-209	ENST00000467908	CDC42BPB	Q9Y5S2	1711 aa		13.93	□□□□□ -0.18
PDXK-209	ENST00000467908	TSHZ2	Q9NRE2	1034 aa		13.92	□□□□□ -0.18
PDXK-209	ENST00000467908	ABCC1	P33527	1531 aa		13.92	□□□□□ -0.18
PDXK-209	ENST00000467908	CCDC43	Q96MW1	224 aa	Known RBP	13.92	□□□□□ -0.18
PDXK-209	ENST00000467908	ZNF428	Q96B54	188 aa		13.92	□□□□□ -0.18
PDXK-209	ENST00000467908	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.92	□□□□□ -0.18
PDXK-209	ENST00000467908	FAM13B	Q9NYF5	915 aa		13.92	□□□□□ -0.18
PDXK-209	ENST00000467908	ARHGEF5	Q12774	1597 aa		13.92	□□□□□ -0.18
PDXK-209	ENST00000467908	GPRASP1	Q5JY77	1395 aa		13.92	□□□□□ -0.18
PDXK-209	ENST00000467908	CHMP4BP1	P59074	171 aa		13.92	□□□□□ -0.18
PDXK-209	ENST00000467908	SLK	Q9H2G2	1235 aa	Predicted RBP	13.91	□□□□□ -0.18
PDXK-209	ENST00000467908	NCKAP5L	Q9HCH0	1330 aa		13.91	□□□□□ -0.18
PDXK-209	ENST00000467908	MBD5	Q9P267	1494 aa		13.9	□□□□□ -0.18
PDXK-209	ENST00000467908	MAST1	Q9Y2H9	1570 aa		13.9	□□□□□ -0.18
PDXK-209	ENST00000467908	TPM4	P67936	248 aa		13.9	□□□□□ -0.18
PDXK-209	ENST00000467908	FAM177B	A6PVY3	158 aa		13.89	□□□□□ -0.19
PDXK-209	ENST00000467908	ADGRL2	O95490	1459 aa		13.89	□□□□□ -0.19
PDXK-209	ENST00000467908	HECW2	Q9P2P5	1572 aa		13.89	□□□□□ -0.19
PDXK-209	ENST00000467908	FOSB	P53539	338 aa		13.89	□□□□□ -0.19
PDXK-209	ENST00000467908	NUDT16	Q96DE0	195 aa	Known RBP	13.88	□□□□□ -0.19
PDXK-209	ENST00000467908	GBP4	Q96PP9	640 aa		13.88	□□□□□ -0.19
PDXK-209	ENST00000467908	GCC2	Q8IWJ2	1684 aa		13.88	□□□□□ -0.19
PDXK-209	ENST00000467908	RIMS2	Q9UQ26	1411 aa		13.88	□□□□□ -0.19
PDXK-209	ENST00000467908	KDM6B	O15054	1643 aa		13.88	□□□□□ -0.19
PDXK-209	ENST00000467908	SF3B2	Q13435	895 aa	Known RBP	13.87	□□□□□ -0.19
PDXK-209	ENST00000467908	ODF2	Q5BJF6	829 aa		13.87	□□□□□ -0.19
PDXK-209	ENST00000467908	RRP12	Q5JTH9	1297 aa	Known RBP	13.87	□□□□□ -0.19
PDXK-209	ENST00000467908	PZP	P20742	1482 aa		13.87	□□□□□ -0.19
PDXK-209	ENST00000467908	HMOX1	P09601	288 aa		13.87	□□□□□ -0.19
PDXK-209	ENST00000467908	TPM3	P06753	285 aa		13.87	□□□□□ -0.19
PDXK-209	ENST00000467908	NOL10	Q9BSC4	688 aa	Known RBP	13.87	□□□□□ -0.19
PDXK-209	ENST00000467908	VPS37D	Q86XT2	251 aa		13.86	□□□□□ -0.19
PDXK-209	ENST00000467908	DIAPH1	O60610	1272 aa	Known RBP	13.86	□□□□□ -0.19
PDXK-209	ENST00000467908	C14orf93	Q9H972	538 aa	Known RBP	13.86	□□□□□ -0.19
PDXK-209	ENST00000467908	ARHGEF12	Q9NZN5	1544 aa		13.86	□□□□□ -0.19
PDXK-209	ENST00000467908	IK	Q13123	557 aa	Predicted RBP	13.85	□□□□□ -0.19
PDXK-209	ENST00000467908	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.85	□□□□□ -0.19
PDXK-209	ENST00000467908	CNTLN	Q9NXG0	1405 aa		13.84	□□□□□ -0.19
PDXK-209	ENST00000467908	MTHFS	P49914	203 aa		13.84	□□□□□ -0.19
PDXK-209	ENST00000467908	CCDC61	Q9Y6R9	512 aa		13.84	□□□□□ -0.19
PDXK-209	ENST00000467908	KAT6B	Q8WYB5	2073 aa		13.84	□□□□□ -0.19
PDXK-209	ENST00000467908	ITPRIP	Q8IWB1	547 aa		13.84	□□□□□ -0.19
PDXK-209	ENST00000467908	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.83	□□□□□ -0.19
PDXK-209	ENST00000467908	STRN4	Q9NRL3	753 aa		13.83	□□□□□ -0.19
PDXK-209	ENST00000467908	FOXO3	O43524	673 aa		13.83	□□□□□ -0.2
PDXK-209	ENST00000467908	DMRT2	Q9Y5R5	561 aa		13.83	□□□□□ -0.2
PDXK-209	ENST00000467908	SF3A1	Q15459	793 aa	Known RBP	13.83	□□□□□ -0.2
PDXK-209	ENST00000467908	C1orf141	Q5JVX7	400 aa		13.83	□□□□□ -0.2
PDXK-209	ENST00000467908	NLRP2	Q9NX02	1062 aa		13.82	□□□□□ -0.2
PDXK-209	ENST00000467908	NAP1L1	P55209	391 aa	Known RBP	13.82	□□□□□ -0.2
PDXK-209	ENST00000467908	ZNF692	Q9BU19	519 aa	Predicted RBP	13.82	□□□□□ -0.2
PDXK-209	ENST00000467908	C11orf95	C9JLR9	678 aa	Predicted RBP	13.82	□□□□□ -0.2
PDXK-209	ENST00000467908	IPO9	Q96P70	1041 aa	Known RBP	13.82	□□□□□ -0.2
PDXK-209	ENST00000467908	ABCA9	Q8IUA7	1624 aa		13.82	□□□□□ -0.2
PDXK-209	ENST00000467908	EIF2S2	P20042	333 aa	Known RBP	13.81	□□□□□ -0.2
PDXK-209	ENST00000467908	AKAP17A	Q02040	695 aa	Known RBP	13.81	□□□□□ -0.2
PDXK-209	ENST00000467908	WWC2	Q6AWC2	1192 aa		13.81	□□□□□ -0.2
PDXK-209	ENST00000467908	UHRF1BP1	Q6BDS2	1440 aa		13.81	□□□□□ -0.2
PDXK-209	ENST00000467908	CALD1	Q05682	793 aa	Known RBP	13.81	□□□□□ -0.2
PDXK-209	ENST00000467908	GRM1	Q13255	1194 aa		13.81	□□□□□ -0.2
PDXK-209	ENST00000467908	WASL	O00401	505 aa	Predicted RBP	13.8	□□□□□ -0.2
PDXK-209	ENST00000467908	TTC16	Q8NEE8	873 aa		13.8	□□□□□ -0.2
PDXK-209	ENST00000467908	RRS1	Q15050	365 aa	Known RBP	13.8	□□□□□ -0.2
PDXK-209	ENST00000467908	NOM1	Q5C9Z4	860 aa	Known RBP	13.8	□□□□□ -0.2
PDXK-209	ENST00000467908	APAF1	O14727	1248 aa		13.79	□□□□□ -0.2
PDXK-209	ENST00000467908	ATAD2	Q6PL18	1390 aa		13.79	□□□□□ -0.2
PDXK-209	ENST00000467908	ELL2	O00472	640 aa	Predicted RBP	13.79	□□□□□ -0.2
PDXK-209	ENST00000467908	MLH3	Q9UHC1	1453 aa		13.79	□□□□□ -0.2
PDXK-209	ENST00000467908	CA8	P35219	290 aa		13.79	□□□□□ -0.2
PDXK-209	ENST00000467908	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.79	□□□□□ -0.2
PDXK-209	ENST00000467908	TSR1	Q2NL82	804 aa	Known RBP	13.79	□□□□□ -0.2
PDXK-209	ENST00000467908	GSE1	Q14687	1217 aa		13.79	□□□□□ -0.2
PDXK-209	ENST00000467908	SCAF11	Q99590	1463 aa	Known RBP	13.79	□□□□□ -0.2
PDXK-209	ENST00000467908	ZC3H6	P61129	1189 aa	Known RBP	13.79	□□□□□ -0.2
PDXK-209	ENST00000467908	AMOTL1	Q8IY63	956 aa		13.79	□□□□□ -0.2
PDXK-209	ENST00000467908	TEX35	Q5T0J7	233 aa		13.78	□□□□□ -0.2
PDXK-209	ENST00000467908	PLCD4	Q9BRC7	762 aa		13.78	□□□□□ -0.2
PDXK-209	ENST00000467908	HSP90AB2P	Q58FF8	381 aa		13.78	□□□□□ -0.2
PDXK-209	ENST00000467908	GPATCH3	Q96I76	525 aa		13.78	□□□□□ -0.2
PDXK-209	ENST00000467908	MCTP1	Q6DN14	999 aa		13.78	□□□□□ -0.2
PDXK-209	ENST00000467908	NPAT	Q14207	1427 aa		13.78	□□□□□ -0.2
PDXK-209	ENST00000467908	SYAP1	Q96A49	352 aa	Predicted RBP	13.78	□□□□□ -0.2
PDXK-209	ENST00000467908	KIF1B	O60333	1816 aa		13.77	□□□□□ -0.2
PDXK-209	ENST00000467908	NSD3	Q9BZ95	1437 aa		13.77	□□□□□ -0.2
PDXK-209	ENST00000467908	STK31	Q9BXU1	1019 aa		13.77	□□□□□ -0.2
PDXK-209	ENST00000467908	PLIN1	O60240	522 aa		13.77	□□□□□ -0.21
PDXK-209	ENST00000467908	TPM2	P07951	284 aa		13.77	□□□□□ -0.21
PDXK-209	ENST00000467908	PSMD1	Q99460	953 aa		13.77	□□□□□ -0.21
PDXK-209	ENST00000467908	RAPGEF4	Q8WZA2	1011 aa		13.76	□□□□□ -0.21
PDXK-209	ENST00000467908	HTATSF1	O43719	755 aa	Known RBP	13.76	□□□□□ -0.21
PDXK-209	ENST00000467908	LMOD3	Q0VAK6	560 aa		13.76	□□□□□ -0.21
PDXK-209	ENST00000467908	PRAG1	Q86YV5	1406 aa		13.76	□□□□□ -0.21
PDXK-209	ENST00000467908	MAGI2	Q86UL8	1455 aa		13.76	□□□□□ -0.21
PDXK-209	ENST00000467908	TCERG1	O14776	1098 aa	Known RBP	13.76	□□□□□ -0.21
PDXK-209	ENST00000467908	GPS2	Q13227	327 aa		13.76	□□□□□ -0.21
PDXK-209	ENST00000467908		H3BQV1	296 aa		13.76	□□□□□ -0.21
PDXK-209	ENST00000467908	IFFO2	Q5TF58	517 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms