RNA–Protein interactions for RNA: ENST00000466694.5

NUP58-208, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-208ENST00000466694 NCBP3Q53F19 620 aaKnown RBP22.22■■□□□ 1.15
NUP58-208ENST00000466694 WWC1Q8IX03 1113 aa22.22■■□□□ 1.15
NUP58-208ENST00000466694 PLIN1O60240 522 aa22.21■■□□□ 1.15
NUP58-208ENST00000466694 SPINK5Q9NQ38 1064 aaPredicted RBP22.21■■□□□ 1.15
NUP58-208ENST00000466694 CPSF1Q10570 1443 aaKnown RBP22.2■■□□□ 1.14
NUP58-208ENST00000466694 AKAP12Q02952 1782 aa22.2■■□□□ 1.14
NUP58-208ENST00000466694 PPIP5K1Q6PFW1 1433 aa22.2■■□□□ 1.14
NUP58-208ENST00000466694 TCP11L2Q8N4U5 519 aa22.2■■□□□ 1.14
NUP58-208ENST00000466694 MON2Q7Z3U7 1717 aa22.19■■□□□ 1.14
NUP58-208ENST00000466694 CDC42BPGQ6DT37 1551 aa22.19■■□□□ 1.14
NUP58-208ENST00000466694 NPHP4O75161 1426 aaPredicted RBP22.19■■□□□ 1.14
NUP58-208ENST00000466694 PHF23Q9BUL5 403 aaPredicted RBP22.19■■□□□ 1.14
NUP58-208ENST00000466694 EDC4Q6P2E9 1401 aaKnown RBP22.18■■□□□ 1.14
NUP58-208ENST00000466694 ITSN1Q15811 1721 aa22.18■■□□□ 1.14
NUP58-208ENST00000466694 CCDC27Q2M243 656 aa22.17■■□□□ 1.14
NUP58-208ENST00000466694 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.17■■□□□ 1.14
NUP58-208ENST00000466694 PRR36Q9H6K5 1346 aa22.17■■□□□ 1.14
NUP58-208ENST00000466694 U2AF1L5P0DN76 240 aaPredicted RBP22.17■■□□□ 1.14
NUP58-208ENST00000466694 U2AF1Q01081 240 aaKnown RBP eCLIP22.17■■□□□ 1.144e-6■■■■□ 20.8
NUP58-208ENST00000466694 NUDT16Q96DE0 195 aaKnown RBP22.17■■□□□ 1.14
NUP58-208ENST00000466694 DMRT2Q9Y5R5 561 aa22.17■■□□□ 1.14
NUP58-208ENST00000466694 PNPLA6Q8IY17 1366 aa22.16■■□□□ 1.14
NUP58-208ENST00000466694 KCNA6P17658 529 aa22.15■■□□□ 1.14
NUP58-208ENST00000466694 CCDC61Q9Y6R9 512 aa22.15■■□□□ 1.14
NUP58-208ENST00000466694 WDR63Q8IWG1 891 aa22.15■■□□□ 1.14
NUP58-208ENST00000466694 CRBNQ96SW2 442 aa22.15■■□□□ 1.14
NUP58-208ENST00000466694 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.13■■□□□ 1.13
NUP58-208ENST00000466694 RRP7AQ9Y3A4 280 aaKnown RBP22.12■■□□□ 1.13
NUP58-208ENST00000466694 NALCNQ8IZF0 1738 aa22.12■■□□□ 1.13
NUP58-208ENST00000466694 NWD1Q149M9 1564 aa22.12■■□□□ 1.13
NUP58-208ENST00000466694 NEUROD2Q15784 382 aa22.11■■□□□ 1.13
NUP58-208ENST00000466694 RGPD8O14715 1765 aaPredicted RBP22.11■■□□□ 1.13
NUP58-208ENST00000466694 NCKAP5LQ9HCH0 1330 aa22.11■■□□□ 1.13
NUP58-208ENST00000466694 C20orf194Q5TEA3 1177 aa22.11■■□□□ 1.13
NUP58-208ENST00000466694 FMN2Q9NZ56 1722 aa22.1■■□□□ 1.13
NUP58-208ENST00000466694 KDM4FA0A1W2PPD8 638 aa22.1■■□□□ 1.13
NUP58-208ENST00000466694 NRKQ7Z2Y5 1582 aa22.1■■□□□ 1.13
NUP58-208ENST00000466694 DIAPH1O60610 1272 aaKnown RBP22.09■■□□□ 1.13
NUP58-208ENST00000466694 PLEKHF1Q96S99 279 aa22.09■■□□□ 1.13
NUP58-208ENST00000466694 U2SURPO15042 1029 aaKnown RBP22.09■■□□□ 1.13
NUP58-208ENST00000466694 MAP2P11137 1827 aaKnown RBP22.08■■□□□ 1.12
NUP58-208ENST00000466694 ZNF692Q9BU19 519 aaPredicted RBP22.07■■□□□ 1.12
NUP58-208ENST00000466694 PNNQ9H307 717 aaKnown RBP22.07■■□□□ 1.12
NUP58-208ENST00000466694 POLKQ9UBT6 870 aa22.06■■□□□ 1.12
NUP58-208ENST00000466694 PLEKHG3A1L390 1219 aa22.05■■□□□ 1.12
NUP58-208ENST00000466694 AATKQ6ZMQ8 1374 aa22.05■■□□□ 1.12
NUP58-208ENST00000466694 ANKARQ7Z5J8 1434 aa22.04■■□□□ 1.12
NUP58-208ENST00000466694 NME9Q86XW9 330 aa22.04■■□□□ 1.12
NUP58-208ENST00000466694 MAPK8IP3Q9UPT6 1336 aa22.04■■□□□ 1.12
NUP58-208ENST00000466694 BCAR3O75815 825 aa22.03■■□□□ 1.12
NUP58-208ENST00000466694 TMPOP42166 694 aaKnown RBP22.03■■□□□ 1.12
NUP58-208ENST00000466694 MYH16Q9H6N6 1097 aa22.03■■□□□ 1.12
NUP58-208ENST00000466694 CDK12Q9NYV4 1490 aaPredicted RBP22.02■■□□□ 1.12
NUP58-208ENST00000466694 FANCIQ9NVI1 1328 aa22.02■■□□□ 1.12
NUP58-208ENST00000466694 LMTK3Q96Q04 1460 aa22.01■■□□□ 1.11
NUP58-208ENST00000466694 COG3Q96JB2 828 aa22.01■■□□□ 1.11
NUP58-208ENST00000466694 ADGRL3Q9HAR2 1447 aa22.01■■□□□ 1.11
NUP58-208ENST00000466694 NUTM2FA1L443 756 aa22■■□□□ 1.11
NUP58-208ENST00000466694 FCHSD2O94868 740 aa22■■□□□ 1.11
NUP58-208ENST00000466694 ACEP12821 1306 aa22■■□□□ 1.11
NUP58-208ENST00000466694 LRRC7Q96NW7 1537 aa22■■□□□ 1.11
NUP58-208ENST00000466694 USP6P35125 1406 aa21.99■■□□□ 1.11
NUP58-208ENST00000466694 PDE3AQ14432 1141 aa21.98■■□□□ 1.11
NUP58-208ENST00000466694 SSH2Q76I76 1423 aa21.98■■□□□ 1.11
NUP58-208ENST00000466694 FBLN1P23142 703 aa21.98■■□□□ 1.11
NUP58-208ENST00000466694 ZRANB1Q9UGI0 708 aa21.98■■□□□ 1.11
NUP58-208ENST00000466694 TRIM35Q9UPQ4 493 aa21.98■■□□□ 1.11
NUP58-208ENST00000466694 STRCP1A6NGW2 1772 aa21.98■■□□□ 1.11
NUP58-208ENST00000466694 IL16Q14005 1332 aa21.97■■□□□ 1.11
NUP58-208ENST00000466694 PPM1GO15355 546 aaPredicted RBP21.97■■□□□ 1.11
NUP58-208ENST00000466694 RARSP54136 660 aaKnown RBP21.97■■□□□ 1.11
NUP58-208ENST00000466694 TCERG1O14776 1098 aaKnown RBP21.96■■□□□ 1.11
NUP58-208ENST00000466694 EMILIN1Q9Y6C2 1016 aa21.96■■□□□ 1.11
NUP58-208ENST00000466694 STRCQ7RTU9 1775 aa21.96■■□□□ 1.11
NUP58-208ENST00000466694 RSPH6AQ9H0K4 717 aa21.96■■□□□ 1.11
NUP58-208ENST00000466694 TTC21BQ7Z4L5 1316 aa21.95■■□□□ 1.1
NUP58-208ENST00000466694 KDM2BQ8NHM5 1336 aa21.95■■□□□ 1.1
NUP58-208ENST00000466694 CT47B1P0C2W7 299 aaPredicted RBP21.95■■□□□ 1.1
NUP58-208ENST00000466694 HSPA2P54652 639 aa21.94■■□□□ 1.1
NUP58-208ENST00000466694 IL13P35225 146 aa21.94■■□□□ 1.1
NUP58-208ENST00000466694 RIPK4P57078 832 aa21.94■■□□□ 1.1
NUP58-208ENST00000466694 CENPQQ7L2Z9 268 aaPredicted RBP21.93■■□□□ 1.1
NUP58-208ENST00000466694 RBM33Q96EV2 1170 aaKnown RBP21.92■■□□□ 1.1
NUP58-208ENST00000466694 NEFMP07197 916 aa21.92■■□□□ 1.1
NUP58-208ENST00000466694 CANXP27824 592 aaKnown RBP21.92■■□□□ 1.1
NUP58-208ENST00000466694 PRKAR2BP31323 418 aa21.92■■□□□ 1.1
NUP58-208ENST00000466694 OVOS2A0A0J9YW53 1432 aa21.92■■□□□ 1.1
NUP58-208ENST00000466694 OVOS2Q6IE36 1432 aa21.92■■□□□ 1.1
NUP58-208ENST00000466694 MS4A1P11836 297 aa21.91■■□□□ 1.1
NUP58-208ENST00000466694 PMFBP1Q8TBY8 1022 aa21.91■■□□□ 1.1
NUP58-208ENST00000466694 PIK3C2AO00443 1686 aa21.89■■□□□ 1.09
NUP58-208ENST00000466694 USP54Q70EL1 1684 aa21.88■■□□□ 1.09
NUP58-208ENST00000466694 RRS1Q15050 365 aaKnown RBP21.88■■□□□ 1.09
NUP58-208ENST00000466694 TTC21AQ8NDW8 1320 aa21.87■■□□□ 1.09
NUP58-208ENST00000466694 NFE2L2Q16236 605 aa21.87■■□□□ 1.09
NUP58-208ENST00000466694 TSR2Q969E8 191 aaKnown RBP21.87■■□□□ 1.09
NUP58-208ENST00000466694 MARF1Q9Y4F3 1742 aaKnown RBP21.86■■□□□ 1.09
NUP58-208ENST00000466694 NGDNQ8NEJ9 315 aaKnown RBP21.86■■□□□ 1.09
NUP58-208ENST00000466694 FRAT1Q92837 279 aaPredicted RBP21.86■■□□□ 1.09
NUP58-208ENST00000466694 USP31Q70CQ4 1352 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms