RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 MYL6BP14649 208 aa15.58■□□□□ 0.08
NUP58-206ENST00000463407 TWISTNBQ3B726 338 aaPredicted RBP15.58■□□□□ 0.08
NUP58-206ENST00000463407 PLB1Q6P1J6 1458 aa15.57■□□□□ 0.08
NUP58-206ENST00000463407 KIF14Q15058 1648 aa15.57■□□□□ 0.08
NUP58-206ENST00000463407 TPM2P07951 284 aa15.57■□□□□ 0.08
NUP58-206ENST00000463407 CEBPAP49715 358 aaPredicted RBP15.57■□□□□ 0.08
NUP58-206ENST00000463407 RALYLQ86SE5 291 aaKnown RBP15.57■□□□□ 0.08
NUP58-206ENST00000463407 ZNF428Q96B54 188 aa15.57■□□□□ 0.08
NUP58-206ENST00000463407 INTS3Q68E01 1043 aaKnown RBP15.57■□□□□ 0.08
NUP58-206ENST00000463407 CCDC141Q6ZP82 1450 aa15.57■□□□□ 0.08
NUP58-206ENST00000463407 NBPF8Q3BBV2 869 aa15.57■□□□□ 0.08
NUP58-206ENST00000463407 CCDC43Q96MW1 224 aaKnown RBP15.57■□□□□ 0.08
NUP58-206ENST00000463407 GNAI3P08754 354 aa15.57■□□□□ 0.08
NUP58-206ENST00000463407 DNAJC2Q99543 621 aaKnown RBP15.57■□□□□ 0.08
NUP58-206ENST00000463407 IKQ13123 557 aaPredicted RBP15.56■□□□□ 0.08
NUP58-206ENST00000463407 HDGFL1Q5TGJ6 251 aa15.56■□□□□ 0.08
NUP58-206ENST00000463407 FOSBP53539 338 aa15.56■□□□□ 0.08
NUP58-206ENST00000463407 SURF6O75683 361 aaKnown RBP15.56■□□□□ 0.08
NUP58-206ENST00000463407 EXOSC9Q06265 439 aaKnown RBP15.56■□□□□ 0.08
NUP58-206ENST00000463407 WAPLQ7Z5K2 1190 aa15.56■□□□□ 0.08
NUP58-206ENST00000463407 ATAD2Q6PL18 1390 aa15.55■□□□□ 0.08
NUP58-206ENST00000463407 FSD1Q9BTV5 496 aa15.55■□□□□ 0.08
NUP58-206ENST00000463407 TTC39AQ5SRH9 613 aa15.55■□□□□ 0.08
NUP58-206ENST00000463407 CAMSAP2Q08AD1 1489 aa15.55■□□□□ 0.08
NUP58-206ENST00000463407 NINLQ9Y2I6 1382 aa15.55■□□□□ 0.08
NUP58-206ENST00000463407 CCDC47Q96A33 483 aaKnown RBP15.54■□□□□ 0.08
NUP58-206ENST00000463407 ADAMTS2O95450 1211 aa15.54■□□□□ 0.08
NUP58-206ENST00000463407 SLC4A2P04920 1241 aa15.54■□□□□ 0.08
NUP58-206ENST00000463407 CLASRPQ8N2M8 674 aaKnown RBP15.54■□□□□ 0.08
NUP58-206ENST00000463407 BTBD11A6QL63 1104 aa15.54■□□□□ 0.08
NUP58-206ENST00000463407 TPM3P06753 285 aa15.54■□□□□ 0.08
NUP58-206ENST00000463407 CNTROBQ8N137 903 aa15.54■□□□□ 0.08
NUP58-206ENST00000463407 TSR1Q2NL82 804 aaKnown RBP15.54■□□□□ 0.08
NUP58-206ENST00000463407 WWC1Q8IX03 1113 aa15.54■□□□□ 0.08
NUP58-206ENST00000463407 GNL3LQ9NVN8 582 aaKnown RBP15.54■□□□□ 0.08
NUP58-206ENST00000463407 KCNH5Q8NCM2 988 aa15.53■□□□□ 0.08
NUP58-206ENST00000463407 FBXO31Q5XUX0 539 aaPredicted RBP15.53■□□□□ 0.08
NUP58-206ENST00000463407 BICDL1Q6ZP65 573 aa15.53■□□□□ 0.08
NUP58-206ENST00000463407 DDX49Q9Y6V7 483 aaKnown RBP15.52■□□□□ 0.08
NUP58-206ENST00000463407 AAMPQ13685 434 aa15.52■□□□□ 0.08
NUP58-206ENST00000463407 PTPN23Q9H3S7 1636 aa15.52■□□□□ 0.08
NUP58-206ENST00000463407 CDCA7LQ96GN5 454 aa15.52■□□□□ 0.07
NUP58-206ENST00000463407 CCDC158Q5M9N0 1113 aa15.52■□□□□ 0.07
NUP58-206ENST00000463407 SAFBQ15424 915 aaKnown RBP eCLIP15.51■□□□□ 0.07
NUP58-206ENST00000463407 CCAR1Q8IX12 1150 aaKnown RBP15.51■□□□□ 0.07
NUP58-206ENST00000463407 TSR2Q969E8 191 aaKnown RBP15.51■□□□□ 0.07
NUP58-206ENST00000463407 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.51■□□□□ 0.07
NUP58-206ENST00000463407 CCDC61Q9Y6R9 512 aa15.51■□□□□ 0.07
NUP58-206ENST00000463407 GOLGA6L19H0YKK7 550 aa15.51■□□□□ 0.07
NUP58-206ENST00000463407 AKNAQ7Z591 1439 aa15.51■□□□□ 0.07
NUP58-206ENST00000463407 KDM4AO75164 1064 aa15.5■□□□□ 0.07
NUP58-206ENST00000463407 AMOTL2Q9Y2J4 779 aa15.5■□□□□ 0.07
NUP58-206ENST00000463407 GNAI2P04899 355 aa15.5■□□□□ 0.07
NUP58-206ENST00000463407 PCMTD1Q96MG8 357 aaPredicted RBP15.5■□□□□ 0.07
NUP58-206ENST00000463407 NOB1Q9ULX3 412 aaKnown RBP15.5■□□□□ 0.07
NUP58-206ENST00000463407 BECN2A8MW95 431 aa15.5■□□□□ 0.07
NUP58-206ENST00000463407 SLC3A2P08195 630 aaKnown RBP15.5■□□□□ 0.07
NUP58-206ENST00000463407 ERC1Q8IUD2 1116 aa15.5■□□□□ 0.07
NUP58-206ENST00000463407 DMRT2Q9Y5R5 561 aa15.5■□□□□ 0.07
NUP58-206ENST00000463407 SMC3Q9UQE7 1217 aa15.49■□□□□ 0.07
NUP58-206ENST00000463407 RBM5P52756 815 aaKnown RBP eCLIP15.49■□□□□ 0.07
NUP58-206ENST00000463407 DENND4BO75064 1496 aaPredicted RBP15.49■□□□□ 0.07
NUP58-206ENST00000463407 SKOR2Q2VWA4 1001 aaPredicted RBP15.49■□□□□ 0.07
NUP58-206ENST00000463407 MPHOSPH8Q99549 860 aa15.49■□□□□ 0.07
NUP58-206ENST00000463407 C1orf115Q9H7X2 142 aa15.49■□□□□ 0.07
NUP58-206ENST00000463407 VPS37CA5D8V6 355 aaPredicted RBP15.49■□□□□ 0.07
NUP58-206ENST00000463407 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
NUP58-206ENST00000463407 SIL1Q9H173 461 aa15.48■□□□□ 0.07
NUP58-206ENST00000463407 BRMS1Q9HCU9 246 aa15.48■□□□□ 0.07
NUP58-206ENST00000463407 A0A0U1RQG5 324 aaPredicted RBP15.48■□□□□ 0.07
NUP58-206ENST00000463407 URB2Q14146 1524 aaKnown RBP15.48■□□□□ 0.07
NUP58-206ENST00000463407 PPP6R1Q9UPN7 881 aa15.48■□□□□ 0.07
NUP58-206ENST00000463407 CDC45O75419 566 aa15.48■□□□□ 0.07
NUP58-206ENST00000463407 TPM1P09493 284 aa15.48■□□□□ 0.07
NUP58-206ENST00000463407 ZNF608Q9ULD9 1512 aaPredicted RBP15.48■□□□□ 0.07
NUP58-206ENST00000463407 SART3Q15020 963 aaKnown RBP15.47■□□□□ 0.07
NUP58-206ENST00000463407 HOOK1Q9UJC3 728 aaKnown RBP15.47■□□□□ 0.07
NUP58-206ENST00000463407 CCDC57Q2TAC2 916 aa15.47■□□□□ 0.07
NUP58-206ENST00000463407 NGLY1Q96IV0 654 aa15.47■□□□□ 0.07
NUP58-206ENST00000463407 RRP12Q5JTH9 1297 aaKnown RBP15.47■□□□□ 0.07
NUP58-206ENST00000463407 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.47■□□□□ 0.07
NUP58-206ENST00000463407 BICD2Q8TD16 824 aa15.47■□□□□ 0.07
NUP58-206ENST00000463407 STARD3NLO95772 234 aa15.46■□□□□ 0.07
NUP58-206ENST00000463407 PSMA5P28066 241 aa15.46■□□□□ 0.07
NUP58-206ENST00000463407 SRCIN1Q9C0H9 1055 aa15.46■□□□□ 0.07
NUP58-206ENST00000463407 TMOD3Q9NYL9 352 aa15.46■□□□□ 0.07
NUP58-206ENST00000463407 GNAT3A8MTJ3 354 aa15.46■□□□□ 0.07
NUP58-206ENST00000463407 XBP1P17861 261 aa15.46■□□□□ 0.07
NUP58-206ENST00000463407 CCT4P50991 539 aaKnown RBP15.46■□□□□ 0.06
NUP58-206ENST00000463407 PHF8Q9UPP1 1060 aa15.46■□□□□ 0.06
NUP58-206ENST00000463407 FANCAO15360 1455 aa15.46■□□□□ 0.06
NUP58-206ENST00000463407 ATP2B2Q01814 1243 aa15.45■□□□□ 0.06
NUP58-206ENST00000463407 NSD3Q9BZ95 1437 aa15.45■□□□□ 0.06
NUP58-206ENST00000463407 FOXO3O43524 673 aa15.45■□□□□ 0.06
NUP58-206ENST00000463407 HMGB2P26583 209 aaKnown RBP15.45■□□□□ 0.06
NUP58-206ENST00000463407 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.45■□□□□ 0.066e-11■□□□□ 9.5
NUP58-206ENST00000463407 C22orf23Q9BZE7 217 aa15.45■□□□□ 0.06
NUP58-206ENST00000463407 NAIPQ13075 1403 aa15.45■□□□□ 0.06
NUP58-206ENST00000463407 STK11IPQ8N1F8 1099 aa15.44■□□□□ 0.06
NUP58-206ENST00000463407 ANKRD20A12PQ8NF67 263 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms