RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 KRT28Q7Z3Y7 464 aa19.61■□□□□ 0.73
COL6A1-202ENST00000463060 NSD2O96028 1365 aa19.6■□□□□ 0.73
COL6A1-202ENST00000463060 PARD3Q8TEW0 1356 aa19.6■□□□□ 0.73
COL6A1-202ENST00000463060 NPHP3Q7Z494 1330 aa19.6■□□□□ 0.73
COL6A1-202ENST00000463060 PXDNQ92626 1479 aa19.6■□□□□ 0.73
COL6A1-202ENST00000463060 TRPM3Q9HCF6 1732 aaPredicted RBP19.59■□□□□ 0.73
COL6A1-202ENST00000463060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.59■□□□□ 0.73
COL6A1-202ENST00000463060 MIER1Q8N108 512 aa19.59■□□□□ 0.73
COL6A1-202ENST00000463060 DDX17Q92841 729 aaKnown RBP19.59■□□□□ 0.73
COL6A1-202ENST00000463060 SOS2Q07890 1332 aaPredicted RBP19.58■□□□□ 0.73
COL6A1-202ENST00000463060 ANP32CO43423 234 aa19.58■□□□□ 0.72
COL6A1-202ENST00000463060 CC2D1BQ5T0F9 858 aaKnown RBP19.58■□□□□ 0.72
COL6A1-202ENST00000463060 NME9Q86XW9 330 aa19.58■□□□□ 0.72
COL6A1-202ENST00000463060 USP31Q70CQ4 1352 aa19.57■□□□□ 0.72
COL6A1-202ENST00000463060 RALBP1Q15311 655 aa19.57■□□□□ 0.72
COL6A1-202ENST00000463060 ZRANB1Q9UGI0 708 aa19.57■□□□□ 0.72
COL6A1-202ENST00000463060 NHSL1Q5SYE7 1610 aa19.57■□□□□ 0.72
COL6A1-202ENST00000463060 SBNO1A3KN83 1393 aa19.57■□□□□ 0.72
COL6A1-202ENST00000463060 ROBO1Q9Y6N7 1651 aa19.56■□□□□ 0.72
COL6A1-202ENST00000463060 XPCQ01831 940 aaPredicted RBP19.56■□□□□ 0.72
COL6A1-202ENST00000463060 GGNBP2Q9H3C7 697 aa19.56■□□□□ 0.72
COL6A1-202ENST00000463060 KIF20BQ96Q89 1820 aa19.55■□□□□ 0.72
COL6A1-202ENST00000463060 UBAP1LF5GYI3 381 aa19.55■□□□□ 0.72
COL6A1-202ENST00000463060 PIK3C2AO00443 1686 aa19.55■□□□□ 0.72
COL6A1-202ENST00000463060 ANKRD26Q9UPS8 1709 aa19.54■□□□□ 0.72
COL6A1-202ENST00000463060 OVOS2A0A0J9YW53 1432 aa19.54■□□□□ 0.72
COL6A1-202ENST00000463060 OVOS2Q6IE36 1432 aa19.54■□□□□ 0.72
COL6A1-202ENST00000463060 ILDR2Q71H61 639 aa19.54■□□□□ 0.72
COL6A1-202ENST00000463060 USP54Q70EL1 1684 aa19.53■□□□□ 0.72
COL6A1-202ENST00000463060 AHDC1Q5TGY3 1603 aaPredicted RBP19.53■□□□□ 0.72
COL6A1-202ENST00000463060 ALS2Q96Q42 1657 aa19.52■□□□□ 0.72
COL6A1-202ENST00000463060 SPATA31A3Q5VYP0 1347 aa19.52■□□□□ 0.72
COL6A1-202ENST00000463060 MORC1Q86VD1 984 aa19.52■□□□□ 0.72
COL6A1-202ENST00000463060 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
COL6A1-202ENST00000463060 MARF1Q9Y4F3 1742 aaKnown RBP19.51■□□□□ 0.71
COL6A1-202ENST00000463060 PAK3O75914 559 aaPredicted RBP19.51■□□□□ 0.71
COL6A1-202ENST00000463060 CNGB1Q14028 1251 aaPredicted RBP19.51■□□□□ 0.71
COL6A1-202ENST00000463060 ABTB2Q8N961 1025 aa19.51■□□□□ 0.71
COL6A1-202ENST00000463060 COG3Q96JB2 828 aa19.5■□□□□ 0.71
COL6A1-202ENST00000463060 NLRP6P59044 892 aa19.49■□□□□ 0.71
COL6A1-202ENST00000463060 PIP4K2BP78356 416 aa19.49■□□□□ 0.71
COL6A1-202ENST00000463060 TNS3Q68CZ2 1445 aa19.49■□□□□ 0.71
COL6A1-202ENST00000463060 MYBBP1AQ9BQG0 1328 aaKnown RBP19.49■□□□□ 0.71
COL6A1-202ENST00000463060 PPP2R1AP30153 589 aa19.48■□□□□ 0.71
COL6A1-202ENST00000463060 NLRP13Q86W25 1043 aa19.47■□□□□ 0.71
COL6A1-202ENST00000463060 USP19O94966 1318 aa19.47■□□□□ 0.71
COL6A1-202ENST00000463060 AATKQ6ZMQ8 1374 aa19.46■□□□□ 0.71
COL6A1-202ENST00000463060 CCER2I3L3R5 266 aa19.46■□□□□ 0.71
COL6A1-202ENST00000463060 NUTM2GQ5VZR2 741 aa19.45■□□□□ 0.7
COL6A1-202ENST00000463060 ARHGEF10O15013 1369 aa19.44■□□□□ 0.7
COL6A1-202ENST00000463060 FBLN1P23142 703 aa19.44■□□□□ 0.7
COL6A1-202ENST00000463060 LRRC59Q96AG4 307 aaKnown RBP19.44■□□□□ 0.7
COL6A1-202ENST00000463060 SLIT3O75094 1523 aa19.44■□□□□ 0.7
COL6A1-202ENST00000463060 COL16A1Q07092 1604 aaPredicted RBP19.43■□□□□ 0.7
COL6A1-202ENST00000463060 TNNT2P45379 298 aaPredicted RBP19.43■□□□□ 0.7
COL6A1-202ENST00000463060 CCDC184Q52MB2 194 aa19.43■□□□□ 0.7
COL6A1-202ENST00000463060 MED1Q15648 1581 aaPredicted RBP19.43■□□□□ 0.7
COL6A1-202ENST00000463060 POLKQ9UBT6 870 aa19.42■□□□□ 0.7
COL6A1-202ENST00000463060 PHLPP1O60346 1717 aa19.42■□□□□ 0.7
COL6A1-202ENST00000463060 SOCS7O14512 581 aa19.41■□□□□ 0.7
COL6A1-202ENST00000463060 LMOD2Q6P5Q4 547 aa19.41■□□□□ 0.7
COL6A1-202ENST00000463060 CRYBG1Q9Y4K1 1723 aa19.41■□□□□ 0.7
COL6A1-202ENST00000463060 NFAT5O94916 1531 aa19.41■□□□□ 0.7
COL6A1-202ENST00000463060 GCP02774 474 aa19.4■□□□□ 0.7
COL6A1-202ENST00000463060 MTHFSP49914 203 aa19.4■□□□□ 0.7
COL6A1-202ENST00000463060 SMG6Q86US8 1419 aaKnown RBP19.4■□□□□ 0.7
COL6A1-202ENST00000463060 MAP2P11137 1827 aaKnown RBP19.39■□□□□ 0.7
COL6A1-202ENST00000463060 KCNH5Q8NCM2 988 aa19.39■□□□□ 0.69
COL6A1-202ENST00000463060 INSRP06213 1382 aa19.39■□□□□ 0.69
COL6A1-202ENST00000463060 PNPLA6Q8IY17 1366 aa19.39■□□□□ 0.69
COL6A1-202ENST00000463060 COL22A1Q8NFW1 1626 aaPredicted RBP19.36■□□□□ 0.69
COL6A1-202ENST00000463060 MAP3K19Q56UN5 1328 aa19.36■□□□□ 0.69
COL6A1-202ENST00000463060 RRS1Q15050 365 aaKnown RBP19.36■□□□□ 0.69
COL6A1-202ENST00000463060 CABLES1Q8TDN4 633 aa19.36■□□□□ 0.69
COL6A1-202ENST00000463060 EMILIN1Q9Y6C2 1016 aa19.36■□□□□ 0.69
COL6A1-202ENST00000463060 PHRF1Q9P1Y6 1649 aaKnown RBP19.36■□□□□ 0.69
COL6A1-202ENST00000463060 ARHGEF25Q86VW2 580 aa19.35■□□□□ 0.69
COL6A1-202ENST00000463060 KIF24Q5T7B8 1368 aa19.33■□□□□ 0.69
COL6A1-202ENST00000463060 SOX12O15370 315 aa19.33■□□□□ 0.68
COL6A1-202ENST00000463060 MRS2Q9HD23 443 aa19.33■□□□□ 0.68
COL6A1-202ENST00000463060 PEAK1Q9H792 1746 aa19.33■□□□□ 0.68
COL6A1-202ENST00000463060 COL3A1P02461 1466 aaPredicted RBP19.33■□□□□ 0.68
COL6A1-202ENST00000463060 CPDO75976 1380 aa19.32■□□□□ 0.68
COL6A1-202ENST00000463060 ABCA3Q99758 1704 aa19.32■□□□□ 0.68
COL6A1-202ENST00000463060 HSPA1LP34931 641 aa19.32■□□□□ 0.68
COL6A1-202ENST00000463060 PNISRQ8TF01 805 aaKnown RBP19.32■□□□□ 0.68
COL6A1-202ENST00000463060 CDK12Q9NYV4 1490 aaPredicted RBP19.32■□□□□ 0.68
COL6A1-202ENST00000463060 IP6K1Q92551 441 aa19.3■□□□□ 0.68
COL6A1-202ENST00000463060 SHPRHQ149N8 1683 aa19.29■□□□□ 0.68
COL6A1-202ENST00000463060 RTL1A6NKG5 1358 aa19.29■□□□□ 0.68
COL6A1-202ENST00000463060 JCADQ9P266 1359 aa19.29■□□□□ 0.68
COL6A1-202ENST00000463060 LTN1O94822 1766 aa19.29■□□□□ 0.68
COL6A1-202ENST00000463060 COL18A1P39060 1754 aa19.29■□□□□ 0.68
COL6A1-202ENST00000463060 PLEKHG5O94827 1062 aa19.28■□□□□ 0.68
COL6A1-202ENST00000463060 HOXC9P31274 260 aa19.28■□□□□ 0.68
COL6A1-202ENST00000463060 ZC3H6P61129 1189 aaKnown RBP19.28■□□□□ 0.68
COL6A1-202ENST00000463060 HSP90AB2PQ58FF8 381 aa19.28■□□□□ 0.68
COL6A1-202ENST00000463060 FLT4P35916 1363 aa19.28■□□□□ 0.68
COL6A1-202ENST00000463060 PPM1GO15355 546 aaPredicted RBP19.27■□□□□ 0.68
COL6A1-202ENST00000463060 CFAP53Q96M91 514 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms