RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 EID1Q9Y6B2 187 aa17.29■□□□□ 0.36
TOP3B-213ENST00000457179 SBNO2Q9Y2G9 1366 aa17.29■□□□□ 0.36
TOP3B-213ENST00000457179 MYO5BQ9ULV0 1848 aa17.29■□□□□ 0.36
TOP3B-213ENST00000457179 NUDT16Q96DE0 195 aaKnown RBP17.29■□□□□ 0.36
TOP3B-213ENST00000457179 PANK2Q9BZ23 570 aa17.29■□□□□ 0.36
TOP3B-213ENST00000457179 CLTCQ00610 1675 aaKnown RBP17.29■□□□□ 0.36
TOP3B-213ENST00000457179 ANKRD36BQ8N2N9 1353 aa17.29■□□□□ 0.36
TOP3B-213ENST00000457179 C14orf37Q86TY3 774 aa17.29■□□□□ 0.36
TOP3B-213ENST00000457179 NUTM2GQ5VZR2 741 aa17.28■□□□□ 0.36
TOP3B-213ENST00000457179 TSR2Q969E8 191 aaKnown RBP17.28■□□□□ 0.36
TOP3B-213ENST00000457179 EMILIN1Q9Y6C2 1016 aa17.28■□□□□ 0.36
TOP3B-213ENST00000457179 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.28■□□□□ 0.36
TOP3B-213ENST00000457179 PPP6R1Q9UPN7 881 aa17.28■□□□□ 0.36
TOP3B-213ENST00000457179 PPLO60437 1756 aa17.27■□□□□ 0.36
TOP3B-213ENST00000457179 PANK1Q8TE04 598 aa17.27■□□□□ 0.36
TOP3B-213ENST00000457179 A2ML1A8K2U0 1454 aa17.27■□□□□ 0.36
TOP3B-213ENST00000457179 WASLO00401 505 aaPredicted RBP17.27■□□□□ 0.36
TOP3B-213ENST00000457179 CENPQQ7L2Z9 268 aaPredicted RBP17.27■□□□□ 0.35
TOP3B-213ENST00000457179 RUNDC1Q96C34 613 aa17.27■□□□□ 0.35
TOP3B-213ENST00000457179 COG6Q9Y2V7 657 aa17.27■□□□□ 0.35
TOP3B-213ENST00000457179 MAPK8IP3Q9UPT6 1336 aa17.26■□□□□ 0.35
TOP3B-213ENST00000457179 TULP4Q9NRJ4 1543 aa17.25■□□□□ 0.35
TOP3B-213ENST00000457179 E9PSI1 815 aa17.25■□□□□ 0.35
TOP3B-213ENST00000457179 XRCC6P12956 609 aaKnown RBP eCLIP17.25■□□□□ 0.352e-7■■■□□ 15.7
TOP3B-213ENST00000457179 PREX1Q8TCU6 1659 aa17.25■□□□□ 0.35
TOP3B-213ENST00000457179 KDM2BQ8NHM5 1336 aa17.25■□□□□ 0.35
TOP3B-213ENST00000457179 QRICH2Q9H0J4 1663 aa17.25■□□□□ 0.35
TOP3B-213ENST00000457179 MYOM1P52179 1685 aa17.24■□□□□ 0.35
TOP3B-213ENST00000457179 ZBTB7CA1YPR0 619 aa17.24■□□□□ 0.35
TOP3B-213ENST00000457179 TNNQ9UQP3 1299 aa17.24■□□□□ 0.35
TOP3B-213ENST00000457179 ATAD2Q6PL18 1390 aa17.24■□□□□ 0.35
TOP3B-213ENST00000457179 ELL2O00472 640 aaPredicted RBP17.24■□□□□ 0.35
TOP3B-213ENST00000457179 THUMPD2Q9BTF0 503 aaKnown RBP17.24■□□□□ 0.35
TOP3B-213ENST00000457179 INSRP06213 1382 aa17.23■□□□□ 0.35
TOP3B-213ENST00000457179 GOLGA6L3A6NEY3 463 aa17.23■□□□□ 0.35
TOP3B-213ENST00000457179 DIAPH1O60610 1272 aaKnown RBP17.23■□□□□ 0.35
TOP3B-213ENST00000457179 SPRYD3Q8NCJ5 442 aa17.23■□□□□ 0.35
TOP3B-213ENST00000457179 AMOTL2Q9Y2J4 779 aa17.23■□□□□ 0.35
TOP3B-213ENST00000457179 KIF13AQ9H1H9 1805 aa17.22■□□□□ 0.35
TOP3B-213ENST00000457179 CCDC61Q9Y6R9 512 aa17.22■□□□□ 0.35
TOP3B-213ENST00000457179 NPC1L1Q9UHC9 1359 aa17.22■□□□□ 0.35
TOP3B-213ENST00000457179 CLCN1P35523 988 aa17.22■□□□□ 0.35
TOP3B-213ENST00000457179 TMEM131LA2VDJ0 1609 aa17.22■□□□□ 0.35
TOP3B-213ENST00000457179 IFT172Q9UG01 1749 aa17.21■□□□□ 0.35
TOP3B-213ENST00000457179 RIPK4P57078 832 aa17.21■□□□□ 0.35
TOP3B-213ENST00000457179 ALKQ9UM73 1620 aa17.21■□□□□ 0.35
TOP3B-213ENST00000457179 NGDNQ8NEJ9 315 aaKnown RBP17.2■□□□□ 0.34
TOP3B-213ENST00000457179 PTPRMP28827 1452 aa17.2■□□□□ 0.34
TOP3B-213ENST00000457179 NKTRP30414 1462 aaKnown RBP17.2■□□□□ 0.34
TOP3B-213ENST00000457179 KIAA1210Q9ULL0 1709 aa17.2■□□□□ 0.34
TOP3B-213ENST00000457179 SETBP1Q9Y6X0 1596 aa17.2■□□□□ 0.34
TOP3B-213ENST00000457179 PRKAR2BP31323 418 aa17.19■□□□□ 0.34
TOP3B-213ENST00000457179 COG3Q96JB2 828 aa17.19■□□□□ 0.34
TOP3B-213ENST00000457179 IGHDP01880 384 aa17.19■□□□□ 0.34
TOP3B-213ENST00000457179 TRMT2AQ8IZ69 625 aaKnown RBP17.19■□□□□ 0.34
TOP3B-213ENST00000457179 POLR3AO14802 1390 aaPredicted RBP17.19■□□□□ 0.34
TOP3B-213ENST00000457179 TMEM2Q9UHN6 1383 aa17.19■□□□□ 0.34
TOP3B-213ENST00000457179 BECN1Q14457 450 aa17.19■□□□□ 0.34
TOP3B-213ENST00000457179 POLKQ9UBT6 870 aa17.18■□□□□ 0.34
TOP3B-213ENST00000457179 ROBO2Q9HCK4 1378 aa17.17■□□□□ 0.34
TOP3B-213ENST00000457179 SEC24BO95487 1268 aa17.17■□□□□ 0.34
TOP3B-213ENST00000457179 LMOD2Q6P5Q4 547 aa17.17■□□□□ 0.34
TOP3B-213ENST00000457179 ZFYVE9O95405 1425 aa17.17■□□□□ 0.34
TOP3B-213ENST00000457179 PPIP5K1Q6PFW1 1433 aa17.17■□□□□ 0.34
TOP3B-213ENST00000457179 PRR36Q9H6K5 1346 aa17.16■□□□□ 0.34
TOP3B-213ENST00000457179 A0A0U1RQG5 324 aaPredicted RBP17.16■□□□□ 0.34
TOP3B-213ENST00000457179 THEMISQ8N1K5 641 aaPredicted RBP17.16■□□□□ 0.34
TOP3B-213ENST00000457179 NEURL4Q96JN8 1562 aa17.15■□□□□ 0.34
TOP3B-213ENST00000457179 ABCC11Q96J66 1382 aa17.15■□□□□ 0.34
TOP3B-213ENST00000457179 TMPOP42166 694 aaKnown RBP17.15■□□□□ 0.34
TOP3B-213ENST00000457179 PHACTR3Q96KR7 559 aa17.15■□□□□ 0.34
TOP3B-213ENST00000457179 DCTN1Q14203 1278 aa17.15■□□□□ 0.34
TOP3B-213ENST00000457179 LTV1Q96GA3 475 aaPredicted RBP17.15■□□□□ 0.34
TOP3B-213ENST00000457179 ACEP12821 1306 aa17.14■□□□□ 0.34
TOP3B-213ENST00000457179 KCNA6P17658 529 aa17.14■□□□□ 0.33
TOP3B-213ENST00000457179 EXOSC9Q06265 439 aaKnown RBP17.14■□□□□ 0.33
TOP3B-213ENST00000457179 RLBP1P12271 317 aa17.13■□□□□ 0.33
TOP3B-213ENST00000457179 XPCQ01831 940 aaPredicted RBP17.12■□□□□ 0.33
TOP3B-213ENST00000457179 ARHGEF28Q8N1W1 1705 aaKnown RBP17.12■□□□□ 0.33
TOP3B-213ENST00000457179 USP19O94966 1318 aa17.12■□□□□ 0.33
TOP3B-213ENST00000457179 ZC3H13Q5T200 1668 aaKnown RBP17.12■□□□□ 0.33
TOP3B-213ENST00000457179 AGLP35573 1532 aa17.12■□□□□ 0.33
TOP3B-213ENST00000457179 FAM83GA6ND36 823 aa17.12■□□□□ 0.33
TOP3B-213ENST00000457179 RARSP54136 660 aaKnown RBP17.12■□□□□ 0.33
TOP3B-213ENST00000457179 ARHGEF40Q8TER5 1519 aa17.11■□□□□ 0.33
TOP3B-213ENST00000457179 SMC4Q9NTJ3 1288 aa17.11■□□□□ 0.33
TOP3B-213ENST00000457179 AEBP1Q8IUX7 1158 aa17.1■□□□□ 0.33
TOP3B-213ENST00000457179 PUS7Q96PZ0 661 aaKnown RBP17.1■□□□□ 0.33
TOP3B-213ENST00000457179 ESPNB1AK53 854 aa17.1■□□□□ 0.33
TOP3B-213ENST00000457179 HSP90AB2PQ58FF8 381 aa17.1■□□□□ 0.33
TOP3B-213ENST00000457179 ERBB4Q15303 1308 aa17.09■□□□□ 0.33
TOP3B-213ENST00000457179 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
TOP3B-213ENST00000457179 MYH16Q9H6N6 1097 aa17.09■□□□□ 0.33
TOP3B-213ENST00000457179 SULT6B1Q6IMI4 303 aa17.08■□□□□ 0.32
TOP3B-213ENST00000457179 TRIM44Q96DX7 344 aaPredicted RBP17.07■□□□□ 0.32
TOP3B-213ENST00000457179 CD163L1Q9NR16 1453 aa17.07■□□□□ 0.32
TOP3B-213ENST00000457179 FSD2A1L4K1 749 aa17.07■□□□□ 0.32
TOP3B-213ENST00000457179 NLRP6P59044 892 aa17.07■□□□□ 0.32
TOP3B-213ENST00000457179 TRIM35Q9UPQ4 493 aa17.07■□□□□ 0.32
TOP3B-213ENST00000457179 SPATA31D1Q6ZQQ2 1576 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms