RNA–Protein interactions for RNA: ENST00000457029.3

FARP1-205, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-205ENST00000457029 ATRNO75882 1429 aa12.11□□□□□ -0.47
FARP1-205ENST00000457029 DCCP43146 1447 aa12.11□□□□□ -0.47
FARP1-205ENST00000457029 SLC24A1O60721 1099 aa12.1□□□□□ -0.47
FARP1-205ENST00000457029 ADAMTS2O95450 1211 aa12.1□□□□□ -0.47
FARP1-205ENST00000457029 FNBP4Q8N3X1 1017 aaPredicted RBP12.09□□□□□ -0.47
FARP1-205ENST00000457029 ROBO2Q9HCK4 1378 aa12.08□□□□□ -0.48
FARP1-205ENST00000457029 TMF1P82094 1093 aa12.08□□□□□ -0.48
FARP1-205ENST00000457029 SF3B2Q13435 895 aaKnown RBP12.08□□□□□ -0.48
FARP1-205ENST00000457029 DIEXFQ68CQ4 756 aaKnown RBP12.08□□□□□ -0.48
FARP1-205ENST00000457029 PUS7Q96PZ0 661 aaKnown RBP12.08□□□□□ -0.48
FARP1-205ENST00000457029 TRAK1Q9UPV9 953 aa12.08□□□□□ -0.48
FARP1-205ENST00000457029 BRWD3Q6RI45 1802 aa12.07□□□□□ -0.48
FARP1-205ENST00000457029 PLEKHH1Q9ULM0 1364 aa12.06□□□□□ -0.48
FARP1-205ENST00000457029 ZBTB12Q9Y330 459 aaPredicted RBP12.06□□□□□ -0.48
FARP1-205ENST00000457029 C1QTNF8P60827 252 aa12.05□□□□□ -0.48
FARP1-205ENST00000457029 ZNF784Q8NCA9 323 aaPredicted RBP12.05□□□□□ -0.48
FARP1-205ENST00000457029 CDCA8Q53HL2 280 aa12.04□□□□□ -0.48
FARP1-205ENST00000457029 PRAM1Q96QH2 718 aa12.04□□□□□ -0.48
FARP1-205ENST00000457029 NINLQ9Y2I6 1382 aa12.04□□□□□ -0.48
FARP1-205ENST00000457029 TOPAZ1Q8N9V7 1692 aa12.03□□□□□ -0.48
FARP1-205ENST00000457029 MST1RQ04912 1400 aa12.03□□□□□ -0.48
FARP1-205ENST00000457029 CDC42BPGQ6DT37 1551 aa12.03□□□□□ -0.48
FARP1-205ENST00000457029 USP32Q8NFA0 1604 aa12.03□□□□□ -0.48
FARP1-205ENST00000457029 DDX10Q13206 875 aaKnown RBP12.02□□□□□ -0.49
FARP1-205ENST00000457029 STK26Q9P289 416 aa12.02□□□□□ -0.49
FARP1-205ENST00000457029 CAMTA1Q9Y6Y1 1673 aa12.02□□□□□ -0.49
FARP1-205ENST00000457029 NALCNQ8IZF0 1738 aa12.02□□□□□ -0.49
FARP1-205ENST00000457029 ATP7BP35670 1465 aa12.02□□□□□ -0.49
FARP1-205ENST00000457029 GJD4Q96KN9 370 aaPredicted RBP12.01□□□□□ -0.49
FARP1-205ENST00000457029 EVC2Q86UK5 1308 aa12.01□□□□□ -0.49
FARP1-205ENST00000457029 AMOTL2Q9Y2J4 779 aa12□□□□□ -0.49
FARP1-205ENST00000457029 ADGRL3Q9HAR2 1447 aa11.99□□□□□ -0.49
FARP1-205ENST00000457029 CD163L1Q9NR16 1453 aa11.99□□□□□ -0.49
FARP1-205ENST00000457029 FMN2Q9NZ56 1722 aa11.99□□□□□ -0.49
FARP1-205ENST00000457029 NPC1L1Q9UHC9 1359 aa11.98□□□□□ -0.49
FARP1-205ENST00000457029 BAG6P46379 1132 aa11.98□□□□□ -0.49
FARP1-205ENST00000457029 WAPLQ7Z5K2 1190 aa11.98□□□□□ -0.49
FARP1-205ENST00000457029 DDX17Q92841 729 aaKnown RBP11.98□□□□□ -0.49
FARP1-205ENST00000457029 POGKQ9P215 609 aa11.98□□□□□ -0.49
FARP1-205ENST00000457029 ANKARQ7Z5J8 1434 aa11.97□□□□□ -0.49
FARP1-205ENST00000457029 PER1O15534 1290 aaPredicted RBP11.97□□□□□ -0.49
FARP1-205ENST00000457029 MKRN4PQ13434 485 aaPredicted RBP11.97□□□□□ -0.49
FARP1-205ENST00000457029 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.97□□□□□ -0.49
FARP1-205ENST00000457029 ANKRD36BQ8N2N9 1353 aa11.96□□□□□ -0.49
FARP1-205ENST00000457029 MINK1Q8N4C8 1332 aaPredicted RBP11.96□□□□□ -0.49
FARP1-205ENST00000457029 ITSN1Q15811 1721 aa11.96□□□□□ -0.49
FARP1-205ENST00000457029 COL22A1Q8NFW1 1626 aaPredicted RBP11.96□□□□□ -0.5
FARP1-205ENST00000457029 CHD4Q14839 1912 aa11.96□□□□□ -0.5
FARP1-205ENST00000457029 SOS2Q07890 1332 aaPredicted RBP11.95□□□□□ -0.5
FARP1-205ENST00000457029 WASLO00401 505 aaPredicted RBP11.95□□□□□ -0.5
FARP1-205ENST00000457029 R3HDM1Q15032 1099 aaKnown RBP11.95□□□□□ -0.5
FARP1-205ENST00000457029 RBM42Q9BTD8 480 aaKnown RBP11.95□□□□□ -0.5
FARP1-205ENST00000457029 GLI3P10071 1580 aa11.95□□□□□ -0.5
FARP1-205ENST00000457029 NRKQ7Z2Y5 1582 aa11.95□□□□□ -0.5
FARP1-205ENST00000457029 MON2Q7Z3U7 1717 aa11.94□□□□□ -0.5
FARP1-205ENST00000457029 KTN1Q86UP2 1357 aaKnown RBP11.94□□□□□ -0.5
FARP1-205ENST00000457029 AKAP12Q02952 1782 aa11.94□□□□□ -0.5
FARP1-205ENST00000457029 MARF1Q9Y4F3 1742 aaKnown RBP11.94□□□□□ -0.5
FARP1-205ENST00000457029 GOLGB1Q14789 3259 aaKnown RBP11.94□□□□□ -0.5
FARP1-205ENST00000457029 CPSF1Q10570 1443 aaKnown RBP11.94□□□□□ -0.5
FARP1-205ENST00000457029 PARD3Q8TEW0 1356 aa11.93□□□□□ -0.5
FARP1-205ENST00000457029 SAFB2Q14151 953 aaKnown RBP eCLIP11.93□□□□□ -0.5
FARP1-205ENST00000457029 CDK19Q9BWU1 502 aa11.93□□□□□ -0.5
FARP1-205ENST00000457029 A0A1W2PP64 1363 aa11.92□□□□□ -0.5
FARP1-205ENST00000457029 PRR36Q9H6K5 1346 aa11.92□□□□□ -0.5
FARP1-205ENST00000457029 SLC34A2O95436 690 aa11.92□□□□□ -0.5
FARP1-205ENST00000457029 MIER1Q8N108 512 aa11.92□□□□□ -0.5
FARP1-205ENST00000457029 CABP2Q9NPB3 220 aa11.92□□□□□ -0.5
FARP1-205ENST00000457029 AMER1Q5JTC6 1135 aaPredicted RBP11.91□□□□□ -0.5
FARP1-205ENST00000457029 PRKRIP1Q9H875 184 aaPredicted RBP11.91□□□□□ -0.5
FARP1-205ENST00000457029 PANK3Q9H999 370 aa11.91□□□□□ -0.5
FARP1-205ENST00000457029 PPIP5K1Q6PFW1 1433 aa11.91□□□□□ -0.5
FARP1-205ENST00000457029 NSD3Q9BZ95 1437 aa11.91□□□□□ -0.5
FARP1-205ENST00000457029 C1orf167Q5SNV9 1468 aa11.9□□□□□ -0.5
FARP1-205ENST00000457029 UNC5CLQ8IV45 518 aa11.9□□□□□ -0.5
FARP1-205ENST00000457029 SEPT12Q8IYM1 358 aa11.9□□□□□ -0.5
FARP1-205ENST00000457029 POLR3GLQ9BT43 218 aa11.9□□□□□ -0.5
FARP1-205ENST00000457029 ANKRD26Q9UPS8 1709 aa11.9□□□□□ -0.5
FARP1-205ENST00000457029 NSD2O96028 1365 aa11.9□□□□□ -0.5
FARP1-205ENST00000457029 CCER2I3L3R5 266 aa11.89□□□□□ -0.51
FARP1-205ENST00000457029 ANP32CO43423 234 aa11.89□□□□□ -0.51
FARP1-205ENST00000457029 SRPK2P78362 688 aaKnown RBP11.89□□□□□ -0.51
FARP1-205ENST00000457029 KRT27Q7Z3Y8 459 aa11.89□□□□□ -0.51
FARP1-205ENST00000457029 CARD14Q9BXL6 1004 aa11.89□□□□□ -0.51
FARP1-205ENST00000457029 POLR3AO14802 1390 aaPredicted RBP11.89□□□□□ -0.51
FARP1-205ENST00000457029 SSH2Q76I76 1423 aa11.88□□□□□ -0.51
FARP1-205ENST00000457029 SLIT2O94813 1529 aa11.88□□□□□ -0.51
FARP1-205ENST00000457029 NUDT16Q96DE0 195 aaKnown RBP11.88□□□□□ -0.51
FARP1-205ENST00000457029 SLC12A5Q9H2X9 1139 aa11.88□□□□□ -0.51
FARP1-205ENST00000457029 USP54Q70EL1 1684 aa11.87□□□□□ -0.51
FARP1-205ENST00000457029 EDC4Q6P2E9 1401 aaKnown RBP11.87□□□□□ -0.51
FARP1-205ENST00000457029 PLEKHG3A1L390 1219 aa11.87□□□□□ -0.51
FARP1-205ENST00000457029 CCDC61Q9Y6R9 512 aa11.87□□□□□ -0.51
FARP1-205ENST00000457029 KIF20BQ96Q89 1820 aa11.87□□□□□ -0.51
FARP1-205ENST00000457029 DISP2A7MBM2 1401 aa11.86□□□□□ -0.51
FARP1-205ENST00000457029 RGPD1P0DJD0 1748 aa11.86□□□□□ -0.51
FARP1-205ENST00000457029 EN1Q05925 392 aaPredicted RBP11.86□□□□□ -0.51
FARP1-205ENST00000457029 KIF1AQ12756 1690 aa11.86□□□□□ -0.51
FARP1-205ENST00000457029 RALBP1Q15311 655 aa11.85□□□□□ -0.51
FARP1-205ENST00000457029 USP6P35125 1406 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms