RNA–Protein interactions for RNA: ENST00000456458.5

NT5C3A-208, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 1 (best)

Gene NT5C3A, Length 1,742 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-208ENST00000456458 ARHGEF40Q8TER5 1519 aa18.79■□□□□ 0.6
NT5C3A-208ENST00000456458 NLRP1Q9C000 1473 aa18.79■□□□□ 0.6
NT5C3A-208ENST00000456458 U2SURPO15042 1029 aaKnown RBP18.79■□□□□ 0.6
NT5C3A-208ENST00000456458 GGNBP2Q9H3C7 697 aa18.79■□□□□ 0.6
NT5C3A-208ENST00000456458 PNPLA6Q8IY17 1366 aa18.79■□□□□ 0.6
NT5C3A-208ENST00000456458 MVPQ14764 893 aaKnown RBP18.78■□□□□ 0.6
NT5C3A-208ENST00000456458 DIAPH1O60610 1272 aaKnown RBP18.77■□□□□ 0.6
NT5C3A-208ENST00000456458 CDK19Q9BWU1 502 aa18.77■□□□□ 0.6
NT5C3A-208ENST00000456458 FTSJ3Q8IY81 847 aaKnown RBP18.77■□□□□ 0.59
NT5C3A-208ENST00000456458 DZIP1LQ8IYY4 767 aaKnown RBP18.77■□□□□ 0.59
NT5C3A-208ENST00000456458 KIF20BQ96Q89 1820 aa18.77■□□□□ 0.59
NT5C3A-208ENST00000456458 ATP7BP35670 1465 aa18.76■□□□□ 0.59
NT5C3A-208ENST00000456458 CDC42BPGQ6DT37 1551 aa18.75■□□□□ 0.59
NT5C3A-208ENST00000456458 RLBP1P12271 317 aa18.75■□□□□ 0.59
NT5C3A-208ENST00000456458 TRIM35Q9UPQ4 493 aa18.74■□□□□ 0.59
NT5C3A-208ENST00000456458 PCDHB15Q9Y5E8 787 aa18.74■□□□□ 0.59
NT5C3A-208ENST00000456458 SPATA31D1Q6ZQQ2 1576 aa18.74■□□□□ 0.59
NT5C3A-208ENST00000456458 FCHSD2O94868 740 aa18.74■□□□□ 0.59
NT5C3A-208ENST00000456458 FBXO31Q5XUX0 539 aaPredicted RBP18.74■□□□□ 0.59
NT5C3A-208ENST00000456458 UPF2Q9HAU5 1272 aaKnown RBP18.74■□□□□ 0.59
NT5C3A-208ENST00000456458 BCL2L13Q9BXK5 485 aa18.73■□□□□ 0.59
NT5C3A-208ENST00000456458 SMC4Q9NTJ3 1288 aa18.73■□□□□ 0.59
NT5C3A-208ENST00000456458 BECN1Q14457 450 aa18.72■□□□□ 0.59
NT5C3A-208ENST00000456458 DDX19BQ9UMR2 479 aa18.72■□□□□ 0.59
NT5C3A-208ENST00000456458 A2ML1A8K2U0 1454 aa18.72■□□□□ 0.59
NT5C3A-208ENST00000456458 IPO8O15397 1037 aaKnown RBP18.71■□□□□ 0.59
NT5C3A-208ENST00000456458 RIPK4P57078 832 aa18.71■□□□□ 0.59
NT5C3A-208ENST00000456458 EXOSC9Q06265 439 aaKnown RBP18.71■□□□□ 0.59
NT5C3A-208ENST00000456458 FAM69CQ0P6D2 419 aa18.71■□□□□ 0.59
NT5C3A-208ENST00000456458 ZNF428Q96B54 188 aa18.71■□□□□ 0.59
NT5C3A-208ENST00000456458 CABP1Q9NZU7 370 aa18.71■□□□□ 0.59
NT5C3A-208ENST00000456458 DIP2BQ9P265 1576 aa18.71■□□□□ 0.59
NT5C3A-208ENST00000456458 RIMS2Q9UQ26 1411 aa18.71■□□□□ 0.59
NT5C3A-208ENST00000456458 PDZRN3Q9UPQ7 1066 aa18.71■□□□□ 0.59
NT5C3A-208ENST00000456458 KIF16BQ96L93 1317 aa18.71■□□□□ 0.59
NT5C3A-208ENST00000456458 CALD1Q05682 793 aaKnown RBP18.7■□□□□ 0.58
NT5C3A-208ENST00000456458 NFKBIBQ15653 356 aa18.7■□□□□ 0.58
NT5C3A-208ENST00000456458 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.7■□□□□ 0.58
NT5C3A-208ENST00000456458 HDAC1Q13547 482 aaPredicted RBP18.69■□□□□ 0.58
NT5C3A-208ENST00000456458 ALDH1L2Q3SY69 923 aa18.69■□□□□ 0.58
NT5C3A-208ENST00000456458 ATF7IPQ6VMQ6 1270 aa18.69■□□□□ 0.58
NT5C3A-208ENST00000456458 TSR2Q969E8 191 aaKnown RBP18.69■□□□□ 0.58
NT5C3A-208ENST00000456458 CYB5RLQ6IPT4 315 aa18.69■□□□□ 0.58
NT5C3A-208ENST00000456458 USP19O94966 1318 aa18.68■□□□□ 0.58
NT5C3A-208ENST00000456458 TNNQ9UQP3 1299 aa18.68■□□□□ 0.58
NT5C3A-208ENST00000456458 SLC4A3P48751 1232 aa18.67■□□□□ 0.58
NT5C3A-208ENST00000456458 SSH1Q8WYL5 1049 aa18.67■□□□□ 0.58
NT5C3A-208ENST00000456458 TRIM27P14373 513 aa18.66■□□□□ 0.58
NT5C3A-208ENST00000456458 HDGFP51858 240 aaKnown RBP18.66■□□□□ 0.58
NT5C3A-208ENST00000456458 SIRT1Q96EB6 747 aa18.66■□□□□ 0.58
NT5C3A-208ENST00000456458 CHMP4BQ9H444 224 aaKnown RBP18.66■□□□□ 0.58
NT5C3A-208ENST00000456458 SETD1AO15047 1707 aaKnown RBP18.66■□□□□ 0.58
NT5C3A-208ENST00000456458 FAM135BQ49AJ0 1406 aa18.66■□□□□ 0.58
NT5C3A-208ENST00000456458 EDC4Q6P2E9 1401 aaKnown RBP18.66■□□□□ 0.58
NT5C3A-208ENST00000456458 BRPF1P55201 1214 aaPredicted RBP18.66■□□□□ 0.58
NT5C3A-208ENST00000456458 PPIP5K1Q6PFW1 1433 aa18.65■□□□□ 0.58
NT5C3A-208ENST00000456458 RSPH6AQ9H0K4 717 aa18.64■□□□□ 0.57
NT5C3A-208ENST00000456458 RIMBP3CA6NJZ7 1639 aa18.64■□□□□ 0.57
NT5C3A-208ENST00000456458 RIMBP3BA6NNM3 1639 aa18.64■□□□□ 0.57
NT5C3A-208ENST00000456458 RIMBP3Q9UFD9 1639 aa18.64■□□□□ 0.57
NT5C3A-208ENST00000456458 ITPRIPQ8IWB1 547 aa18.63■□□□□ 0.57
NT5C3A-208ENST00000456458 POLKQ9UBT6 870 aa18.63■□□□□ 0.57
NT5C3A-208ENST00000456458 NOB1Q9ULX3 412 aaKnown RBP18.63■□□□□ 0.57
NT5C3A-208ENST00000456458 CPSF1Q10570 1443 aaKnown RBP18.63■□□□□ 0.57
NT5C3A-208ENST00000456458 AATKQ6ZMQ8 1374 aa18.63■□□□□ 0.57
NT5C3A-208ENST00000456458 LRRC7Q96NW7 1537 aa18.63■□□□□ 0.57
NT5C3A-208ENST00000456458 WASLO00401 505 aaPredicted RBP18.62■□□□□ 0.57
NT5C3A-208ENST00000456458 NFE2L2Q16236 605 aa18.62■□□□□ 0.57
NT5C3A-208ENST00000456458 SENP3Q9H4L4 574 aaPredicted RBP18.62■□□□□ 0.57
NT5C3A-208ENST00000456458 CDK12Q9NYV4 1490 aaPredicted RBP18.61■□□□□ 0.57
NT5C3A-208ENST00000456458 PRKAR2BP31323 418 aa18.61■□□□□ 0.57
NT5C3A-208ENST00000456458 GSE1Q14687 1217 aa18.61■□□□□ 0.57
NT5C3A-208ENST00000456458 WAPLQ7Z5K2 1190 aa18.61■□□□□ 0.57
NT5C3A-208ENST00000456458 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.61■□□□□ 0.57
NT5C3A-208ENST00000456458 TBC1D32Q96NH3 1257 aa18.61■□□□□ 0.57
NT5C3A-208ENST00000456458 SEC24BO95487 1268 aa18.6■□□□□ 0.57
NT5C3A-208ENST00000456458 LMOD3Q0VAK6 560 aa18.6■□□□□ 0.57
NT5C3A-208ENST00000456458 KNDC1Q76NI1 1749 aa18.6■□□□□ 0.57
NT5C3A-208ENST00000456458 SMC5Q8IY18 1101 aa18.6■□□□□ 0.57
NT5C3A-208ENST00000456458 ARHGAP45Q92619 1136 aa18.59■□□□□ 0.57
NT5C3A-208ENST00000456458 ZBTB40Q9NUA8 1239 aa18.59■□□□□ 0.57
NT5C3A-208ENST00000456458 TSPOAP1O95153 1857 aa18.59■□□□□ 0.57
NT5C3A-208ENST00000456458 TECPR2O15040 1411 aa18.58■□□□□ 0.57
NT5C3A-208ENST00000456458 GNAI1P63096 354 aa18.58■□□□□ 0.57
NT5C3A-208ENST00000456458 TMEM57Q8N5G2 664 aa18.58■□□□□ 0.57
NT5C3A-208ENST00000456458 ESF1Q9H501 851 aaKnown RBP18.58■□□□□ 0.57
NT5C3A-208ENST00000456458 IFT57Q9NWB7 429 aa18.58■□□□□ 0.57
NT5C3A-208ENST00000456458 MAP2P11137 1827 aaKnown RBP18.58■□□□□ 0.56
NT5C3A-208ENST00000456458 NRXN3Q9Y4C0 1643 aa18.57■□□□□ 0.56
NT5C3A-208ENST00000456458 ZNF692Q9BU19 519 aaPredicted RBP18.57■□□□□ 0.56
NT5C3A-208ENST00000456458 IL13P35225 146 aa18.56■□□□□ 0.56
NT5C3A-208ENST00000456458 COG3Q96JB2 828 aa18.56■□□□□ 0.56
NT5C3A-208ENST00000456458 CCDC61Q9Y6R9 512 aa18.56■□□□□ 0.56
NT5C3A-208ENST00000456458 NUDT16Q96DE0 195 aaKnown RBP18.54■□□□□ 0.56
NT5C3A-208ENST00000456458 MON2Q7Z3U7 1717 aa18.54■□□□□ 0.56
NT5C3A-208ENST00000456458 CPS1P31327 1500 aa18.54■□□□□ 0.56
NT5C3A-208ENST00000456458 METP08581 1390 aa18.53■□□□□ 0.56
NT5C3A-208ENST00000456458 PIK3R4Q99570 1358 aa18.53■□□□□ 0.56
NT5C3A-208ENST00000456458 PTCH1Q13635 1447 aa18.52■□□□□ 0.56
NT5C3A-208ENST00000456458 VAMP4O75379 141 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms