RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 UBAP1LF5GYI3 381 aa22.72■■□□□ 1.23
CCDC90B-202ENST00000455220 PSME1Q06323 249 aa22.72■■□□□ 1.23
CCDC90B-202ENST00000455220 PXDNQ92626 1479 aa22.71■■□□□ 1.23
CCDC90B-202ENST00000455220 TTC21AQ8NDW8 1320 aa22.71■■□□□ 1.23
CCDC90B-202ENST00000455220 KIF20BQ96Q89 1820 aa22.7■■□□□ 1.22
CCDC90B-202ENST00000455220 NSD2O96028 1365 aa22.7■■□□□ 1.22
CCDC90B-202ENST00000455220 AHDC1Q5TGY3 1603 aaPredicted RBP22.69■■□□□ 1.22
CCDC90B-202ENST00000455220 KRT28Q7Z3Y7 464 aa22.68■■□□□ 1.22
CCDC90B-202ENST00000455220 SOS2Q07890 1332 aaPredicted RBP22.68■■□□□ 1.22
CCDC90B-202ENST00000455220 FYB1O15117 783 aa22.67■■□□□ 1.22
CCDC90B-202ENST00000455220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.67■■□□□ 1.223e-6■■■■□ 25.7
CCDC90B-202ENST00000455220 DDX17Q92841 729 aaKnown RBP22.67■■□□□ 1.22
CCDC90B-202ENST00000455220 SBNO1A3KN83 1393 aa22.67■■□□□ 1.22
CCDC90B-202ENST00000455220 ANKRD26Q9UPS8 1709 aa22.67■■□□□ 1.22
CCDC90B-202ENST00000455220 PIK3C2AO00443 1686 aa22.66■■□□□ 1.22
CCDC90B-202ENST00000455220 XPCQ01831 940 aaPredicted RBP22.66■■□□□ 1.22
CCDC90B-202ENST00000455220 ALS2Q96Q42 1657 aa22.65■■□□□ 1.22
CCDC90B-202ENST00000455220 USP54Q70EL1 1684 aa22.65■■□□□ 1.22
CCDC90B-202ENST00000455220 NME9Q86XW9 330 aa22.64■■□□□ 1.22
CCDC90B-202ENST00000455220 USP31Q70CQ4 1352 aa22.64■■□□□ 1.21
CCDC90B-202ENST00000455220 CC2D1BQ5T0F9 858 aaKnown RBP22.63■■□□□ 1.21
CCDC90B-202ENST00000455220 PARD3Q8TEW0 1356 aa22.63■■□□□ 1.21
CCDC90B-202ENST00000455220 OVOS2A0A0J9YW53 1432 aa22.63■■□□□ 1.21
CCDC90B-202ENST00000455220 OVOS2Q6IE36 1432 aa22.63■■□□□ 1.21
CCDC90B-202ENST00000455220 PIP4K2BP78356 416 aa22.63■■□□□ 1.21
CCDC90B-202ENST00000455220 TNS3Q68CZ2 1445 aa22.62■■□□□ 1.21
CCDC90B-202ENST00000455220 PAK3O75914 559 aaPredicted RBP22.62■■□□□ 1.21
CCDC90B-202ENST00000455220 GGNBP2Q9H3C7 697 aa22.62■■□□□ 1.21
CCDC90B-202ENST00000455220 PRKRIP1Q9H875 184 aaPredicted RBP22.62■■□□□ 1.21
CCDC90B-202ENST00000455220 ANP32CO43423 234 aa22.61■■□□□ 1.21
CCDC90B-202ENST00000455220 SPATA31A3Q5VYP0 1347 aa22.61■■□□□ 1.21
CCDC90B-202ENST00000455220 MARF1Q9Y4F3 1742 aaKnown RBP22.61■■□□□ 1.21
CCDC90B-202ENST00000455220 RALBP1Q15311 655 aa22.59■■□□□ 1.21
CCDC90B-202ENST00000455220 ABTB2Q8N961 1025 aa22.59■■□□□ 1.21
CCDC90B-202ENST00000455220 ZRANB1Q9UGI0 708 aa22.59■■□□□ 1.21
CCDC90B-202ENST00000455220 PHLPP1O60346 1717 aa22.58■■□□□ 1.21
CCDC90B-202ENST00000455220 COL16A1Q07092 1604 aaPredicted RBP22.58■■□□□ 1.21
CCDC90B-202ENST00000455220 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
CCDC90B-202ENST00000455220 ARHGEF10O15013 1369 aa22.57■■□□□ 1.2
CCDC90B-202ENST00000455220 CNGB1Q14028 1251 aaPredicted RBP22.57■■□□□ 1.2
CCDC90B-202ENST00000455220 COG3Q96JB2 828 aa22.57■■□□□ 1.2
CCDC90B-202ENST00000455220 MORC1Q86VD1 984 aa22.56■■□□□ 1.2
CCDC90B-202ENST00000455220 NLRP6P59044 892 aa22.55■■□□□ 1.2
CCDC90B-202ENST00000455220 MED1Q15648 1581 aaPredicted RBP22.55■■□□□ 1.2
CCDC90B-202ENST00000455220 NLRP13Q86W25 1043 aa22.54■■□□□ 1.2
CCDC90B-202ENST00000455220 USP19O94966 1318 aa22.54■■□□□ 1.2
CCDC90B-202ENST00000455220 SLIT3O75094 1523 aa22.53■■□□□ 1.2
CCDC90B-202ENST00000455220 LRRC59Q96AG4 307 aaKnown RBP22.53■■□□□ 1.2
CCDC90B-202ENST00000455220 NUTM2GQ5VZR2 741 aa22.52■■□□□ 1.2
CCDC90B-202ENST00000455220 CRYBG1Q9Y4K1 1723 aa22.52■■□□□ 1.19
CCDC90B-202ENST00000455220 LMOD2Q6P5Q4 547 aa22.51■■□□□ 1.19
CCDC90B-202ENST00000455220 MYBBP1AQ9BQG0 1328 aaKnown RBP22.51■■□□□ 1.19
CCDC90B-202ENST00000455220 AATKQ6ZMQ8 1374 aa22.51■■□□□ 1.19
CCDC90B-202ENST00000455220 MIER1Q8N108 512 aa22.5■■□□□ 1.19
CCDC90B-202ENST00000455220 COL22A1Q8NFW1 1626 aaPredicted RBP22.49■■□□□ 1.19
CCDC90B-202ENST00000455220 PHRF1Q9P1Y6 1649 aaKnown RBP22.48■■□□□ 1.19
CCDC90B-202ENST00000455220 NFAT5O94916 1531 aa22.48■■□□□ 1.19
CCDC90B-202ENST00000455220 PPP2R1AP30153 589 aa22.48■■□□□ 1.19
CCDC90B-202ENST00000455220 PNPLA6Q8IY17 1366 aa22.47■■□□□ 1.19
CCDC90B-202ENST00000455220 TNNT2P45379 298 aaPredicted RBP22.46■■□□□ 1.19
CCDC90B-202ENST00000455220 KCNH5Q8NCM2 988 aa22.46■■□□□ 1.19
CCDC90B-202ENST00000455220 ABCA3Q99758 1704 aa22.46■■□□□ 1.19
CCDC90B-202ENST00000455220 SMG6Q86US8 1419 aaKnown RBP22.45■■□□□ 1.19
CCDC90B-202ENST00000455220 MAP2P11137 1827 aaKnown RBP22.45■■□□□ 1.18
CCDC90B-202ENST00000455220 GCP02774 474 aa22.44■■□□□ 1.18
CCDC90B-202ENST00000455220 SHPRHQ149N8 1683 aa22.44■■□□□ 1.18
CCDC90B-202ENST00000455220 FBLN1P23142 703 aa22.42■■□□□ 1.18
CCDC90B-202ENST00000455220 POLKQ9UBT6 870 aa22.42■■□□□ 1.18
CCDC90B-202ENST00000455220 CCER2I3L3R5 266 aa22.42■■□□□ 1.18
CCDC90B-202ENST00000455220 HSPA1LP34931 641 aa22.41■■□□□ 1.18
CCDC90B-202ENST00000455220 SOX12O15370 315 aa22.4■■□□□ 1.18
CCDC90B-202ENST00000455220 RRS1Q15050 365 aaKnown RBP22.4■■□□□ 1.18
CCDC90B-202ENST00000455220 CABLES1Q8TDN4 633 aa22.4■■□□□ 1.18
CCDC90B-202ENST00000455220 JCADQ9P266 1359 aa22.4■■□□□ 1.18
CCDC90B-202ENST00000455220 LTN1O94822 1766 aa22.39■■□□□ 1.18
CCDC90B-202ENST00000455220 MTHFSP49914 203 aa22.39■■□□□ 1.18
CCDC90B-202ENST00000455220 MAP3K19Q56UN5 1328 aa22.39■■□□□ 1.17
CCDC90B-202ENST00000455220 KIF24Q5T7B8 1368 aa22.38■■□□□ 1.17
CCDC90B-202ENST00000455220 PEAK1Q9H792 1746 aa22.38■■□□□ 1.17
CCDC90B-202ENST00000455220 EMILIN1Q9Y6C2 1016 aa22.38■■□□□ 1.17
CCDC90B-202ENST00000455220 CDK12Q9NYV4 1490 aaPredicted RBP22.38■■□□□ 1.17
CCDC90B-202ENST00000455220 CPDO75976 1380 aa22.38■■□□□ 1.17
CCDC90B-202ENST00000455220 ARHGEF25Q86VW2 580 aa22.38■■□□□ 1.17
CCDC90B-202ENST00000455220 INSRP06213 1382 aa22.37■■□□□ 1.17
CCDC90B-202ENST00000455220 RTL1A6NKG5 1358 aa22.36■■□□□ 1.17
CCDC90B-202ENST00000455220 PLEKHG5O94827 1062 aa22.36■■□□□ 1.17
CCDC90B-202ENST00000455220 CCDC184Q52MB2 194 aa22.36■■□□□ 1.17
CCDC90B-202ENST00000455220 ABCC6O95255 1503 aa22.35■■□□□ 1.17
CCDC90B-202ENST00000455220 FLT4P35916 1363 aa22.35■■□□□ 1.17
CCDC90B-202ENST00000455220 COL3A1P02461 1466 aaPredicted RBP22.34■■□□□ 1.17
CCDC90B-202ENST00000455220 KIAA0232Q92628 1395 aa22.32■■□□□ 1.16
CCDC90B-202ENST00000455220 COL18A1P39060 1754 aa22.32■■□□□ 1.16
CCDC90B-202ENST00000455220 ZC3H6P61129 1189 aaKnown RBP22.32■■□□□ 1.16
CCDC90B-202ENST00000455220 MRS2Q9HD23 443 aa22.32■■□□□ 1.16
CCDC90B-202ENST00000455220 PPM1GO15355 546 aaPredicted RBP22.31■■□□□ 1.16
CCDC90B-202ENST00000455220 HOXC9P31274 260 aa22.31■■□□□ 1.16
CCDC90B-202ENST00000455220 AMPHP49418 695 aa22.31■■□□□ 1.16
CCDC90B-202ENST00000455220 HAP1P54257 671 aaPredicted RBP22.31■■□□□ 1.16
CCDC90B-202ENST00000455220 CFAP53Q96M91 514 aa22.31■■□□□ 1.16
CCDC90B-202ENST00000455220 SPATA31A6Q5VVP1 1343 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms