RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 SOS2Q07890 1332 aaPredicted RBP15.43■□□□□ 0.06
TRAF4-206ENST00000454852 CGNL1Q0VF96 1302 aa15.43■□□□□ 0.06
TRAF4-206ENST00000454852 TTC21BQ7Z4L5 1316 aa15.43■□□□□ 0.06
TRAF4-206ENST00000454852 FOXO3O43524 673 aa15.42■□□□□ 0.06
TRAF4-206ENST00000454852 KIF20BQ96Q89 1820 aa15.42■□□□□ 0.06
TRAF4-206ENST00000454852 ANKRD26Q9UPS8 1709 aa15.42■□□□□ 0.06
TRAF4-206ENST00000454852 ALS2Q96Q42 1657 aa15.41■□□□□ 0.06
TRAF4-206ENST00000454852 USP31Q70CQ4 1352 aa15.41■□□□□ 0.06
TRAF4-206ENST00000454852 PSME1Q06323 249 aa15.41■□□□□ 0.06
TRAF4-206ENST00000454852 UBAP1LF5GYI3 381 aa15.4■□□□□ 0.06
TRAF4-206ENST00000454852 FYB1O15117 783 aa15.4■□□□□ 0.06
TRAF4-206ENST00000454852 DIEXFQ68CQ4 756 aaKnown RBP15.4■□□□□ 0.06
TRAF4-206ENST00000454852 KRT28Q7Z3Y7 464 aa15.4■□□□□ 0.06
TRAF4-206ENST00000454852 PIK3C2AO00443 1686 aa15.4■□□□□ 0.06
TRAF4-206ENST00000454852 OVOS2A0A0J9YW53 1432 aa15.39■□□□□ 0.05
TRAF4-206ENST00000454852 OVOS2Q6IE36 1432 aa15.39■□□□□ 0.05
TRAF4-206ENST00000454852 PARD3Q8TEW0 1356 aa15.38■□□□□ 0.05
TRAF4-206ENST00000454852 MARF1Q9Y4F3 1742 aaKnown RBP15.37■□□□□ 0.05
TRAF4-206ENST00000454852 TNS3Q68CZ2 1445 aa15.37■□□□□ 0.05
TRAF4-206ENST00000454852 SPATA31A3Q5VYP0 1347 aa15.37■□□□□ 0.05
TRAF4-206ENST00000454852 SCAF1Q9H7N4 1312 aaKnown RBP15.37■□□□□ 0.05
TRAF4-206ENST00000454852 MED1Q15648 1581 aaPredicted RBP15.36■□□□□ 0.05
TRAF4-206ENST00000454852 COL16A1Q07092 1604 aaPredicted RBP15.36■□□□□ 0.05
TRAF4-206ENST00000454852 RALBP1Q15311 655 aa15.36■□□□□ 0.05
TRAF4-206ENST00000454852 ARHGEF10O15013 1369 aa15.36■□□□□ 0.05
TRAF4-206ENST00000454852 NME9Q86XW9 330 aa15.35■□□□□ 0.05
TRAF4-206ENST00000454852 PRKRIP1Q9H875 184 aaPredicted RBP15.35■□□□□ 0.05
TRAF4-206ENST00000454852 SLIT3O75094 1523 aa15.34■□□□□ 0.05
TRAF4-206ENST00000454852 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRAF4-206ENST00000454852 DDX17Q92841 729 aaKnown RBP15.34■□□□□ 0.05
TRAF4-206ENST00000454852 PHLPP1O60346 1717 aa15.34■□□□□ 0.05
TRAF4-206ENST00000454852 COL22A1Q8NFW1 1626 aaPredicted RBP15.33■□□□□ 0.04
TRAF4-206ENST00000454852 CRYBG1Q9Y4K1 1723 aa15.33■□□□□ 0.04
TRAF4-206ENST00000454852 USP19O94966 1318 aa15.33■□□□□ 0.04
TRAF4-206ENST00000454852 AATKQ6ZMQ8 1374 aa15.33■□□□□ 0.04
TRAF4-206ENST00000454852 ANP32CO43423 234 aa15.32■□□□□ 0.04
TRAF4-206ENST00000454852 XPCQ01831 940 aaPredicted RBP15.32■□□□□ 0.04
TRAF4-206ENST00000454852 CC2D1BQ5T0F9 858 aaKnown RBP15.32■□□□□ 0.04
TRAF4-206ENST00000454852 ABTB2Q8N961 1025 aa15.32■□□□□ 0.04
TRAF4-206ENST00000454852 LRRC59Q96AG4 307 aaKnown RBP15.32■□□□□ 0.04
TRAF4-206ENST00000454852 GGNBP2Q9H3C7 697 aa15.32■□□□□ 0.04
TRAF4-206ENST00000454852 PAK3O75914 559 aaPredicted RBP15.31■□□□□ 0.04
TRAF4-206ENST00000454852 PIP4K2BP78356 416 aa15.31■□□□□ 0.04
TRAF4-206ENST00000454852 NLRP13Q86W25 1043 aa15.31■□□□□ 0.04
TRAF4-206ENST00000454852 COG3Q96JB2 828 aa15.31■□□□□ 0.04
TRAF4-206ENST00000454852 SMG6Q86US8 1419 aaKnown RBP15.29■□□□□ 0.04
TRAF4-206ENST00000454852 NLRP6P59044 892 aa15.29■□□□□ 0.04
TRAF4-206ENST00000454852 MORC1Q86VD1 984 aa15.29■□□□□ 0.04
TRAF4-206ENST00000454852 ZRANB1Q9UGI0 708 aa15.29■□□□□ 0.04
TRAF4-206ENST00000454852 PHRF1Q9P1Y6 1649 aaKnown RBP15.28■□□□□ 0.04
TRAF4-206ENST00000454852 NFAT5O94916 1531 aa15.28■□□□□ 0.04
TRAF4-206ENST00000454852 MYBBP1AQ9BQG0 1328 aaKnown RBP15.28■□□□□ 0.04
TRAF4-206ENST00000454852 SHPRHQ149N8 1683 aa15.28■□□□□ 0.04
TRAF4-206ENST00000454852 KIF24Q5T7B8 1368 aa15.27■□□□□ 0.04
TRAF4-206ENST00000454852 PNPLA6Q8IY17 1366 aa15.27■□□□□ 0.04
TRAF4-206ENST00000454852 ABCA3Q99758 1704 aa15.27■□□□□ 0.04
TRAF4-206ENST00000454852 KCNH5Q8NCM2 988 aa15.27■□□□□ 0.04
TRAF4-206ENST00000454852 PPP2R1AP30153 589 aa15.25■□□□□ 0.03
TRAF4-206ENST00000454852 ABCC6O95255 1503 aa15.25■□□□□ 0.03
TRAF4-206ENST00000454852 INSRP06213 1382 aa15.24■□□□□ 0.03
TRAF4-206ENST00000454852 CCER2I3L3R5 266 aa15.24■□□□□ 0.03
TRAF4-206ENST00000454852 GCP02774 474 aa15.24■□□□□ 0.03
TRAF4-206ENST00000454852 CPDO75976 1380 aa15.24■□□□□ 0.03
TRAF4-206ENST00000454852 JCADQ9P266 1359 aa15.24■□□□□ 0.03
TRAF4-206ENST00000454852 MAP2P11137 1827 aaKnown RBP15.23■□□□□ 0.03
TRAF4-206ENST00000454852 NUTM2GQ5VZR2 741 aa15.23■□□□□ 0.03
TRAF4-206ENST00000454852 FBXO41Q8TF61 875 aa15.23■□□□□ 0.03
TRAF4-206ENST00000454852 CDK12Q9NYV4 1490 aaPredicted RBP15.22■□□□□ 0.03
TRAF4-206ENST00000454852 LMOD2Q6P5Q4 547 aa15.22■□□□□ 0.03
TRAF4-206ENST00000454852 MIER1Q8N108 512 aa15.22■□□□□ 0.03
TRAF4-206ENST00000454852 POLKQ9UBT6 870 aa15.22■□□□□ 0.03
TRAF4-206ENST00000454852 RTL1A6NKG5 1358 aa15.22■□□□□ 0.03
TRAF4-206ENST00000454852 HSPA1LP34931 641 aa15.21■□□□□ 0.03
TRAF4-206ENST00000454852 ARHGEF25Q86VW2 580 aa15.2■□□□□ 0.02
TRAF4-206ENST00000454852 LTN1O94822 1766 aa15.2■□□□□ 0.02
TRAF4-206ENST00000454852 PEAK1Q9H792 1746 aa15.2■□□□□ 0.02
TRAF4-206ENST00000454852 COL3A1P02461 1466 aaPredicted RBP15.2■□□□□ 0.02
TRAF4-206ENST00000454852 MAP3K19Q56UN5 1328 aa15.19■□□□□ 0.02
TRAF4-206ENST00000454852 MTHFSP49914 203 aa15.19■□□□□ 0.02
TRAF4-206ENST00000454852 COL18A1P39060 1754 aa15.19■□□□□ 0.02
TRAF4-206ENST00000454852 SPATA31A6Q5VVP1 1343 aa15.18■□□□□ 0.02
TRAF4-206ENST00000454852 TNNT2P45379 298 aaPredicted RBP15.18■□□□□ 0.02
TRAF4-206ENST00000454852 FLT4P35916 1363 aa15.18■□□□□ 0.02
TRAF4-206ENST00000454852 FBLN1P23142 703 aa15.17■□□□□ 0.02
TRAF4-206ENST00000454852 CNGB1Q14028 1251 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-206ENST00000454852 RRS1Q15050 365 aaKnown RBP15.17■□□□□ 0.02
TRAF4-206ENST00000454852 CABLES1Q8TDN4 633 aa15.17■□□□□ 0.02
TRAF4-206ENST00000454852 EMILIN1Q9Y6C2 1016 aa15.17■□□□□ 0.02
TRAF4-206ENST00000454852 BLMP54132 1417 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-206ENST00000454852 LMO7Q8WWI1 1683 aa15.16■□□□□ 0.02
TRAF4-206ENST00000454852 IP6K1Q92551 441 aa15.16■□□□□ 0.02
TRAF4-206ENST00000454852 KIAA0232Q92628 1395 aa15.14■□□□□ 0.01
TRAF4-206ENST00000454852 COL14A1Q05707 1796 aaKnown RBP15.14■□□□□ 0.01
TRAF4-206ENST00000454852 HOXC9P31274 260 aa15.14■□□□□ 0.01
TRAF4-206ENST00000454852 CFAP53Q96M91 514 aa15.14■□□□□ 0.01
TRAF4-206ENST00000454852 SOX12O15370 315 aa15.12■□□□□ 0.01
TRAF4-206ENST00000454852 AMPHP49418 695 aa15.12■□□□□ 0.01
TRAF4-206ENST00000454852 ZC3H6P61129 1189 aaKnown RBP15.12■□□□□ 0.01
TRAF4-206ENST00000454852 CCDC184Q52MB2 194 aa15.12■□□□□ 0.01
TRAF4-206ENST00000454852 RGPD1P0DJD0 1748 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms