RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 MTMR2Q13614 643 aa11.07□□□□□ -0.64
CUL3-208ENST00000454323 DIXDC1Q155Q3 683 aa11.07□□□□□ -0.64
CUL3-208ENST00000454323 PRR7Q8TB68 274 aa11.06□□□□□ -0.64
CUL3-208ENST00000454323 PCDHGC3Q9UN70 934 aa11.06□□□□□ -0.64
CUL3-208ENST00000454323 UPP2O95045 317 aa11.05□□□□□ -0.64
CUL3-208ENST00000454323 TIMP2P16035 220 aa11.05□□□□□ -0.64
CUL3-208ENST00000454323 PURBQ96QR8 312 aaKnown RBP11.05□□□□□ -0.64
CUL3-208ENST00000454323 MAN1A2O60476 641 aa11.03□□□□□ -0.64
CUL3-208ENST00000454323 SSTR3P32745 418 aaPredicted RBP11.03□□□□□ -0.64
CUL3-208ENST00000454323 GJA5P36382 358 aa11.03□□□□□ -0.64
CUL3-208ENST00000454323 SPIRE2Q8WWL2 714 aa11.03□□□□□ -0.64
CUL3-208ENST00000454323 NR5A1Q13285 461 aa11.02□□□□□ -0.65
CUL3-208ENST00000454323 CTHP32929 405 aa11.01□□□□□ -0.65
CUL3-208ENST00000454323 VSIG10Q8N0Z9 540 aa11.01□□□□□ -0.65
CUL3-208ENST00000454323 RNF225M0QZC1 329 aaPredicted RBP11□□□□□ -0.65
CUL3-208ENST00000454323 CDK15Q96Q40 435 aa11□□□□□ -0.65
CUL3-208ENST00000454323 TTLL12Q14166 644 aaPredicted RBP10.99□□□□□ -0.65
CUL3-208ENST00000454323 SPTLC1O15269 473 aa10.98□□□□□ -0.65
CUL3-208ENST00000454323 KCNMA1Q12791 1236 aa10.98□□□□□ -0.65
CUL3-208ENST00000454323 BCANQ96GW7 911 aa10.98□□□□□ -0.65
CUL3-208ENST00000454323 MOXD2PA6NHM9 499 aa10.97□□□□□ -0.65
CUL3-208ENST00000454323 ZIC2O95409 532 aaPredicted RBP10.97□□□□□ -0.65
CUL3-208ENST00000454323 LYPD8Q6UX82 237 aa10.97□□□□□ -0.65
CUL3-208ENST00000454323 LOC100996750A0A140TA64 210 aa10.96□□□□□ -0.65
CUL3-208ENST00000454323 NDUFV2P19404 249 aa10.96□□□□□ -0.65
CUL3-208ENST00000454323 ARID5BQ14865 1188 aa10.96□□□□□ -0.65
CUL3-208ENST00000454323 BPHLQ86WA6 291 aaPredicted RBP10.96□□□□□ -0.65
CUL3-208ENST00000454323 KLF16Q9BXK1 252 aaPredicted RBP10.96□□□□□ -0.65
CUL3-208ENST00000454323 KRTAP4-6Q9BYQ5 205 aa10.96□□□□□ -0.65
CUL3-208ENST00000454323 AGERQ15109 404 aa10.95□□□□□ -0.66
CUL3-208ENST00000454323 ARMC2Q8NEN0 867 aa10.95□□□□□ -0.66
CUL3-208ENST00000454323 BMP2P12643 396 aa10.94□□□□□ -0.66
CUL3-208ENST00000454323 ZBTB3Q9H5J0 574 aa10.93□□□□□ -0.66
CUL3-208ENST00000454323 PPFIA3O75145 1194 aa10.92□□□□□ -0.66
CUL3-208ENST00000454323 C6orf118Q5T5N4 469 aa10.92□□□□□ -0.66
CUL3-208ENST00000454323 LINC00528Q8N1L1 170 aa10.92□□□□□ -0.66
CUL3-208ENST00000454323 SOBPA7XYQ1 873 aa10.91□□□□□ -0.66
CUL3-208ENST00000454323 AMHR2Q16671 573 aa10.91□□□□□ -0.66
CUL3-208ENST00000454323 ITPKCQ96DU7 683 aa10.91□□□□□ -0.66
CUL3-208ENST00000454323 PRPF38BQ5VTL8 546 aaKnown RBP10.9□□□□□ -0.66
CUL3-208ENST00000454323 MEIOBQ8N635 442 aa10.9□□□□□ -0.66
CUL3-208ENST00000454323 ZFAND3Q9H8U3 227 aa10.9□□□□□ -0.66
CUL3-208ENST00000454323 RSBN1LQ6PCB5 846 aaPredicted RBP10.89□□□□□ -0.67
CUL3-208ENST00000454323 TMEM151AQ8N4L1 468 aa10.89□□□□□ -0.67
CUL3-208ENST00000454323 TSEN34Q9BSV6 310 aaKnown RBP10.89□□□□□ -0.67
CUL3-208ENST00000454323 BEGAINQ9BUH8 593 aa10.89□□□□□ -0.67
CUL3-208ENST00000454323 F12P00748 615 aaPredicted RBP10.88□□□□□ -0.67
CUL3-208ENST00000454323 SUZ12Q15022 739 aaKnown RBP10.88□□□□□ -0.67
CUL3-208ENST00000454323 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.88□□□□□ -0.67
CUL3-208ENST00000454323 NBPF14Q5TI25 921 aa10.88□□□□□ -0.67
CUL3-208ENST00000454323 GIGYF2Q6Y7W6 1299 aaKnown RBP10.88□□□□□ -0.67
CUL3-208ENST00000454323 FOXJ1Q92949 421 aa10.88□□□□□ -0.67
CUL3-208ENST00000454323 PRKCSHP14314 528 aaPredicted RBP10.87□□□□□ -0.67
CUL3-208ENST00000454323 MAP4K5Q9Y4K4 846 aa10.87□□□□□ -0.67
CUL3-208ENST00000454323 EMILIN1Q9Y6C2 1016 aa10.87□□□□□ -0.67
CUL3-208ENST00000454323 TBC1D2Q9BYX2 928 aa10.86□□□□□ -0.67
CUL3-208ENST00000454323 SOS2Q07890 1332 aaPredicted RBP10.85□□□□□ -0.67
CUL3-208ENST00000454323 MAP10Q9P2G4 905 aa10.85□□□□□ -0.67
CUL3-208ENST00000454323 KDM2AQ9Y2K7 1162 aa10.85□□□□□ -0.67
CUL3-208ENST00000454323 NR3C2P08235 984 aa10.84□□□□□ -0.67
CUL3-208ENST00000454323 KCTD17Q8N5Z5 321 aa10.84□□□□□ -0.67
CUL3-208ENST00000454323 GDF11O95390 407 aa10.83□□□□□ -0.68
CUL3-208ENST00000454323 GRM5P41594 1212 aa10.83□□□□□ -0.68
CUL3-208ENST00000454323 BARGINQ6ZT62 677 aa10.83□□□□□ -0.68
CUL3-208ENST00000454323 CFAP99D6REC4 459 aa10.82□□□□□ -0.68
CUL3-208ENST00000454323 HRCP23327 699 aa10.82□□□□□ -0.68
CUL3-208ENST00000454323 FSHRP23945 695 aa10.82□□□□□ -0.68
CUL3-208ENST00000454323 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.82□□□□□ -0.68
CUL3-208ENST00000454323 VASH1Q7L8A9 365 aaPredicted RBP10.82□□□□□ -0.68
CUL3-208ENST00000454323 RASSF7Q02833 373 aa10.81□□□□□ -0.68
CUL3-208ENST00000454323 TRMT44Q8IYL2 757 aaKnown RBP10.81□□□□□ -0.68
CUL3-208ENST00000454323 GPKOWQ92917 476 aaPredicted RBP eCLIP10.81□□□□□ -0.68
CUL3-208ENST00000454323 C1QTNF2Q9BXJ5 285 aa10.81□□□□□ -0.68
CUL3-208ENST00000454323 DNMT3LQ9UJW3 386 aa10.81□□□□□ -0.68
CUL3-208ENST00000454323 TTLL8A6PVC2 850 aa10.8□□□□□ -0.68
CUL3-208ENST00000454323 CCDC116Q8IYX3 515 aa10.8□□□□□ -0.68
CUL3-208ENST00000454323 PGPEP1Q9NXJ5 209 aa10.8□□□□□ -0.68
CUL3-208ENST00000454323 RIC3Q7Z5B4 369 aa10.79□□□□□ -0.68
CUL3-208ENST00000454323 HELBQ8NG08 1087 aaPredicted RBP10.79□□□□□ -0.68
CUL3-208ENST00000454323 C4orf48Q5BLP8 95 aa10.78□□□□□ -0.68
CUL3-208ENST00000454323 NANOS1Q8WY41 292 aaKnown RBP10.78□□□□□ -0.68
CUL3-208ENST00000454323 CNTNAP3BQ96NU0 1288 aa10.78□□□□□ -0.68
CUL3-208ENST00000454323 CNTNAP3Q9BZ76 1288 aa10.78□□□□□ -0.68
CUL3-208ENST00000454323 ADAMTS8Q9UP79 889 aa10.78□□□□□ -0.68
CUL3-208ENST00000454323 IGHA1P01876 353 aa10.77□□□□□ -0.69
CUL3-208ENST00000454323 TSC1Q92574 1164 aa10.77□□□□□ -0.69
CUL3-208ENST00000454323 CDV3Q9UKY7 258 aaKnown RBP10.77□□□□□ -0.69
CUL3-208ENST00000454323 PCDHB15Q9Y5E8 787 aa10.77□□□□□ -0.69
CUL3-208ENST00000454323 ZMYND10O75800 440 aa10.76□□□□□ -0.69
CUL3-208ENST00000454323 TUSC1Q2TAM9 212 aa10.76□□□□□ -0.69
CUL3-208ENST00000454323 SH3RF1Q7Z6J0 888 aa10.76□□□□□ -0.69
CUL3-208ENST00000454323 SVOPQ8N4V2 548 aa10.76□□□□□ -0.69
CUL3-208ENST00000454323 NUTM2BA6NNL0 878 aaPredicted RBP10.75□□□□□ -0.69
CUL3-208ENST00000454323 NUTM2EB1AL46 878 aaPredicted RBP10.75□□□□□ -0.69
CUL3-208ENST00000454323 GSK3AP49840 483 aa10.75□□□□□ -0.69
CUL3-208ENST00000454323 FOXK2Q01167 660 aa10.75□□□□□ -0.69
CUL3-208ENST00000454323 PTSQ03393 145 aa10.75□□□□□ -0.69
CUL3-208ENST00000454323 NUTM2DQ5VT03 806 aaPredicted RBP10.75□□□□□ -0.69
CUL3-208ENST00000454323 NUTM2AQ8IVF1 878 aaPredicted RBP10.75□□□□□ -0.69
CUL3-208ENST00000454323 DHX9Q08211 1270 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms