RNA–Protein interactions for RNA: ENST00000454269.5

HCG18-240, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,430 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-240ENST00000454269 CTAGE5O15320 804 aa10.83□□□□□ -0.68
HCG18-240ENST00000454269 DHX16O60231 1041 aaKnown RBP10.83□□□□□ -0.68
HCG18-240ENST00000454269 MSNP26038 577 aaKnown RBP10.83□□□□□ -0.68
HCG18-240ENST00000454269 GRPEL1Q9HAV7 217 aa10.83□□□□□ -0.68
HCG18-240ENST00000454269 SPINK5Q9NQ38 1064 aaPredicted RBP10.83□□□□□ -0.68
HCG18-240ENST00000454269 RPS6KL1Q9Y6S9 549 aa10.83□□□□□ -0.68
HCG18-240ENST00000454269 GLI2P10070 1586 aa10.82□□□□□ -0.68
HCG18-240ENST00000454269 LRCH2Q5VUJ6 765 aa10.82□□□□□ -0.68
HCG18-240ENST00000454269 SPOCK2Q92563 424 aa10.82□□□□□ -0.68
HCG18-240ENST00000454269 MTMR7Q9Y216 660 aa10.82□□□□□ -0.68
HCG18-240ENST00000454269 FHOD3Q2V2M9 1422 aa10.81□□□□□ -0.68
HCG18-240ENST00000454269 GOLGA6CA6NDK9 693 aa10.81□□□□□ -0.68
HCG18-240ENST00000454269 GOLGA6BA6NDN3 693 aa10.81□□□□□ -0.68
HCG18-240ENST00000454269 GOLGA6DP0CG33 693 aa10.81□□□□□ -0.68
HCG18-240ENST00000454269 HS1BP3Q53T59 392 aa10.81□□□□□ -0.68
HCG18-240ENST00000454269 GOLGA6AQ9NYA3 693 aa10.81□□□□□ -0.68
HCG18-240ENST00000454269 KNSTRNQ9Y448 316 aa10.81□□□□□ -0.68
HCG18-240ENST00000454269 LIG1P18858 919 aa10.8□□□□□ -0.68
HCG18-240ENST00000454269 WDR7Q9Y4E6 1490 aa10.8□□□□□ -0.68
HCG18-240ENST00000454269 ANP32CO43423 234 aa10.8□□□□□ -0.68
HCG18-240ENST00000454269 HNRNPUQ00839 825 aaKnown RBP eCLIP10.8□□□□□ -0.68
HCG18-240ENST00000454269 NME8Q8N427 588 aa10.8□□□□□ -0.68
HCG18-240ENST00000454269 KCTD17Q8N5Z5 321 aa10.8□□□□□ -0.68
HCG18-240ENST00000454269 FEZ1Q99689 392 aa10.8□□□□□ -0.68
HCG18-240ENST00000454269 ANAPC4Q9UJX5 808 aa10.8□□□□□ -0.68
HCG18-240ENST00000454269 SMC3Q9UQE7 1217 aa10.8□□□□□ -0.68
HCG18-240ENST00000454269 KDM4FA0A1W2PPD8 638 aa10.79□□□□□ -0.68
HCG18-240ENST00000454269 IPO7O95373 1038 aaKnown RBP10.79□□□□□ -0.68
HCG18-240ENST00000454269 KANK4Q5T7N3 995 aaPredicted RBP10.79□□□□□ -0.68
HCG18-240ENST00000454269 PPP1R9BQ96SB3 815 aa10.79□□□□□ -0.68
HCG18-240ENST00000454269 SUFUQ9UMX1 484 aa10.79□□□□□ -0.68
HCG18-240ENST00000454269 CREBRFQ8IUR6 639 aa10.79□□□□□ -0.68
HCG18-240ENST00000454269 RSPH14Q9UHP6 348 aa10.79□□□□□ -0.68
HCG18-240ENST00000454269 RNF123Q5XPI4 1314 aa10.79□□□□□ -0.68
HCG18-240ENST00000454269 CCDC173Q0VFZ6 552 aa10.78□□□□□ -0.68
HCG18-240ENST00000454269 BIRC2Q13490 618 aa10.78□□□□□ -0.68
HCG18-240ENST00000454269 ZRSR2Q15696 482 aaKnown RBP10.78□□□□□ -0.68
HCG18-240ENST00000454269 DNAJC21Q5F1R6 531 aaKnown RBP10.78□□□□□ -0.68
HCG18-240ENST00000454269 CCDC97Q96F63 343 aaPredicted RBP10.78□□□□□ -0.68
HCG18-240ENST00000454269 PPP1R15AO75807 674 aaPredicted RBP10.78□□□□□ -0.68
HCG18-240ENST00000454269 SLFN14P0C7P3 912 aa10.78□□□□□ -0.68
HCG18-240ENST00000454269 BECN1Q14457 450 aa10.78□□□□□ -0.68
HCG18-240ENST00000454269 PAXBP1Q9Y5B6 917 aa10.78□□□□□ -0.68
HCG18-240ENST00000454269 ATP10BO94823 1461 aa10.78□□□□□ -0.68
HCG18-240ENST00000454269 RAPGEF6Q8TEU7 1601 aa10.78□□□□□ -0.68
HCG18-240ENST00000454269 TRDNQ13061 729 aa10.77□□□□□ -0.68
HCG18-240ENST00000454269 FOXD4L5Q5VV16 416 aaPredicted RBP10.77□□□□□ -0.68
HCG18-240ENST00000454269 PNISRQ8TF01 805 aaKnown RBP10.77□□□□□ -0.68
HCG18-240ENST00000454269 FOXD4L4Q8WXT5 416 aaPredicted RBP10.77□□□□□ -0.68
HCG18-240ENST00000454269 KDM4CQ9H3R0 1056 aa10.77□□□□□ -0.68
HCG18-240ENST00000454269 GTF2F1P35269 517 aaKnown RBP eCLIP10.77□□□□□ -0.691e-8■■■□□ 18.6
HCG18-240ENST00000454269 CCT2P78371 535 aaKnown RBP10.77□□□□□ -0.69
HCG18-240ENST00000454269 NOL10Q9BSC4 688 aaKnown RBP10.77□□□□□ -0.69
HCG18-240ENST00000454269 ZNF710Q8N1W2 664 aa10.76□□□□□ -0.69
HCG18-240ENST00000454269 MYRIPQ8NFW9 859 aa10.76□□□□□ -0.69
HCG18-240ENST00000454269 NUCKS1Q9H1E3 243 aaKnown RBP10.76□□□□□ -0.69
HCG18-240ENST00000454269 CXorf56Q9H5V9 222 aa10.76□□□□□ -0.69
HCG18-240ENST00000454269 NEFHP12036 1026 aa10.76□□□□□ -0.69
HCG18-240ENST00000454269 PAX7P23759 505 aa10.76□□□□□ -0.69
HCG18-240ENST00000454269 SPRYD3Q8NCJ5 442 aa10.76□□□□□ -0.69
HCG18-240ENST00000454269 SSFA2P28290 1259 aa10.75□□□□□ -0.69
HCG18-240ENST00000454269 SLC4A3P48751 1232 aa10.75□□□□□ -0.69
HCG18-240ENST00000454269 CFAP43Q8NDM7 1665 aa10.75□□□□□ -0.69
HCG18-240ENST00000454269 LRRIQ1Q96JM4 1722 aa10.75□□□□□ -0.69
HCG18-240ENST00000454269 NUP153P49790 1475 aaKnown RBP10.75□□□□□ -0.69
HCG18-240ENST00000454269 GSCP56915 257 aaPredicted RBP10.75□□□□□ -0.69
HCG18-240ENST00000454269 PIK3R5Q8WYR1 880 aa10.75□□□□□ -0.69
HCG18-240ENST00000454269 SUDS3Q9H7L9 328 aaPredicted RBP10.75□□□□□ -0.69
HCG18-240ENST00000454269 OGFRQ9NZT2 677 aa10.75□□□□□ -0.69
HCG18-240ENST00000454269 ANKRD33BA6NCL7 494 aa10.74□□□□□ -0.69
HCG18-240ENST00000454269 RASSF4Q9H2L5 321 aa10.74□□□□□ -0.69
HCG18-240ENST00000454269 BRD1O95696 1058 aa10.74□□□□□ -0.69
HCG18-240ENST00000454269 CD151P48509 253 aa10.74□□□□□ -0.69
HCG18-240ENST00000454269 TPM3P06753 285 aa10.73□□□□□ -0.69
HCG18-240ENST00000454269 MCM5P33992 734 aa10.73□□□□□ -0.69
HCG18-240ENST00000454269 TNPO1Q92973 898 aaKnown RBP10.73□□□□□ -0.69
HCG18-240ENST00000454269 CDK13Q14004 1512 aaKnown RBP10.73□□□□□ -0.69
HCG18-240ENST00000454269 PROCA1Q8NCQ7 364 aaPredicted RBP10.73□□□□□ -0.69
HCG18-240ENST00000454269 MTA3Q9BTC8 594 aa10.73□□□□□ -0.69
HCG18-240ENST00000454269 UPF2Q9HAU5 1272 aaKnown RBP10.73□□□□□ -0.69
HCG18-240ENST00000454269 CD109Q6YHK3 1445 aa10.72□□□□□ -0.69
HCG18-240ENST00000454269 CCDC91Q7Z6B0 441 aa10.72□□□□□ -0.69
HCG18-240ENST00000454269 ATL2Q8NHH9 583 aa10.72□□□□□ -0.69
HCG18-240ENST00000454269 C1orf115Q9H7X2 142 aa10.72□□□□□ -0.69
HCG18-240ENST00000454269 CCDC196A0A1B0GTZ2 297 aa10.72□□□□□ -0.69
HCG18-240ENST00000454269 ERCC4Q92889 916 aaPredicted RBP10.72□□□□□ -0.69
HCG18-240ENST00000454269 NOL7Q9UMY1 257 aaKnown RBP10.72□□□□□ -0.69
HCG18-240ENST00000454269 TBC1D22AQ8WUA7 517 aa10.71□□□□□ -0.69
HCG18-240ENST00000454269 PRIMPOLQ96LW4 560 aa10.71□□□□□ -0.69
HCG18-240ENST00000454269 DDX49Q9Y6V7 483 aaKnown RBP10.71□□□□□ -0.69
HCG18-240ENST00000454269 ADGRL1O94910 1474 aa10.71□□□□□ -0.7
HCG18-240ENST00000454269 DDX10Q13206 875 aaKnown RBP10.7□□□□□ -0.7
HCG18-240ENST00000454269 TIAM1Q13009 1591 aa10.7□□□□□ -0.7
HCG18-240ENST00000454269 H0YHG0 523 aa10.7□□□□□ -0.7
HCG18-240ENST00000454269 HMGN5P82970 282 aaKnown RBP10.7□□□□□ -0.7
HCG18-240ENST00000454269 SARNPP82979 210 aaKnown RBP10.7□□□□□ -0.7
HCG18-240ENST00000454269 TERF2Q15554 542 aa10.7□□□□□ -0.7
HCG18-240ENST00000454269 HDGFL1Q5TGJ6 251 aa10.7□□□□□ -0.7
HCG18-240ENST00000454269 CCDC125Q86Z20 511 aa10.7□□□□□ -0.7
HCG18-240ENST00000454269 ABCA9Q8IUA7 1624 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms