RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 UQCRHLA0A096LP55 91 aa16.77■□□□□ 0.28
ITGB4-202ENST00000449880 UQCRHP07919 91 aa16.77■□□□□ 0.28
ITGB4-202ENST00000449880 RPRD2Q5VT52 1461 aaKnown RBP16.77■□□□□ 0.28
ITGB4-202ENST00000449880 MAPKBP1O60336 1514 aa16.77■□□□□ 0.28
ITGB4-202ENST00000449880 AKAP17AQ02040 695 aaKnown RBP16.77■□□□□ 0.28
ITGB4-202ENST00000449880 ELL2O00472 640 aaPredicted RBP16.76■□□□□ 0.27
ITGB4-202ENST00000449880 TTC5Q8N0Z6 440 aa16.76■□□□□ 0.27
ITGB4-202ENST00000449880 ZSCAN30Q86W11 494 aa16.76■□□□□ 0.27
ITGB4-202ENST00000449880 CCDC73Q6ZRK6 1079 aa16.76■□□□□ 0.27
ITGB4-202ENST00000449880 CREBRFQ8IUR6 639 aa16.76■□□□□ 0.27
ITGB4-202ENST00000449880 PNISRQ8TF01 805 aaKnown RBP16.76■□□□□ 0.27
ITGB4-202ENST00000449880 TSPYL1Q9H0U9 437 aa16.76■□□□□ 0.27
ITGB4-202ENST00000449880 RAPGEF3O95398 923 aa16.76■□□□□ 0.27
ITGB4-202ENST00000449880 MCM4P33991 863 aa16.76■□□□□ 0.27
ITGB4-202ENST00000449880 CCDC184Q52MB2 194 aa16.75■□□□□ 0.27
ITGB4-202ENST00000449880 CPLX2Q6PUV4 134 aaKnown RBP16.75■□□□□ 0.27
ITGB4-202ENST00000449880 PDCL3Q9H2J4 239 aa16.75■□□□□ 0.27
ITGB4-202ENST00000449880 NUP153P49790 1475 aaKnown RBP16.75■□□□□ 0.27
ITGB4-202ENST00000449880 SYNE3Q6ZMZ3 975 aa16.75■□□□□ 0.27
ITGB4-202ENST00000449880 NOL10Q9BSC4 688 aaKnown RBP16.75■□□□□ 0.27
ITGB4-202ENST00000449880 RPGRIP1LQ68CZ1 1315 aa16.75■□□□□ 0.27
ITGB4-202ENST00000449880 AMOTL1Q8IY63 956 aa16.75■□□□□ 0.27
ITGB4-202ENST00000449880 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
ITGB4-202ENST00000449880 MTHFSP49914 203 aa16.74■□□□□ 0.27
ITGB4-202ENST00000449880 RUFY1Q96T51 708 aa16.74■□□□□ 0.27
ITGB4-202ENST00000449880 ANO2Q9NQ90 1003 aa16.74■□□□□ 0.27
ITGB4-202ENST00000449880 SLC52A1Q9NWF4 448 aa16.74■□□□□ 0.27
ITGB4-202ENST00000449880 LEKR1Q6ZMV7 388 aa16.74■□□□□ 0.27
ITGB4-202ENST00000449880 RBM10P98175 930 aaKnown RBP16.73■□□□□ 0.27
ITGB4-202ENST00000449880 CDCA7LQ96GN5 454 aa16.73■□□□□ 0.27
ITGB4-202ENST00000449880 KIAA0556O60303 1618 aa16.73■□□□□ 0.27
ITGB4-202ENST00000449880 C11orf95C9JLR9 678 aaPredicted RBP16.73■□□□□ 0.27
ITGB4-202ENST00000449880 GCC1Q96CN9 775 aa16.73■□□□□ 0.27
ITGB4-202ENST00000449880 CT47B1P0C2W7 299 aaPredicted RBP16.72■□□□□ 0.27
ITGB4-202ENST00000449880 ITSN2Q9NZM3 1697 aa16.72■□□□□ 0.27
ITGB4-202ENST00000449880 HSP90AB4PQ58FF6 505 aa16.72■□□□□ 0.27
ITGB4-202ENST00000449880 PRAM1Q96QH2 718 aa16.72■□□□□ 0.27
ITGB4-202ENST00000449880 ADGRL1O94910 1474 aa16.72■□□□□ 0.27
ITGB4-202ENST00000449880 FOXD4L6Q3SYB3 417 aaPredicted RBP16.71■□□□□ 0.27
ITGB4-202ENST00000449880 FOXD4L3Q6VB84 417 aaPredicted RBP16.71■□□□□ 0.27
ITGB4-202ENST00000449880 PDZRN3Q9UPQ7 1066 aa16.71■□□□□ 0.27
ITGB4-202ENST00000449880 K7ELQ4 463 aaPredicted RBP16.71■□□□□ 0.26
ITGB4-202ENST00000449880 CD109Q6YHK3 1445 aa16.7■□□□□ 0.26
ITGB4-202ENST00000449880 SLC12A5Q9H2X9 1139 aa16.7■□□□□ 0.26
ITGB4-202ENST00000449880 ATP10BO94823 1461 aa16.7■□□□□ 0.26
ITGB4-202ENST00000449880 TCOF1Q13428 1488 aaKnown RBP16.7■□□□□ 0.26
ITGB4-202ENST00000449880 WDR62O43379 1518 aa16.7■□□□□ 0.26
ITGB4-202ENST00000449880 APPP05067 770 aa16.7■□□□□ 0.26
ITGB4-202ENST00000449880 RDXP35241 583 aaKnown RBP16.7■□□□□ 0.26
ITGB4-202ENST00000449880 GNAI1P63096 354 aa16.7■□□□□ 0.26
ITGB4-202ENST00000449880 TRIM34Q9BYJ4 488 aa16.7■□□□□ 0.26
ITGB4-202ENST00000449880 LNPKQ9C0E8 428 aa16.7■□□□□ 0.26
ITGB4-202ENST00000449880 C9orf78Q9NZ63 289 aaPredicted RBP16.7■□□□□ 0.26
ITGB4-202ENST00000449880 TRIM29Q14134 588 aa16.69■□□□□ 0.26
ITGB4-202ENST00000449880 CCDC47Q96A33 483 aaKnown RBP16.69■□□□□ 0.26
ITGB4-202ENST00000449880 VPS37CA5D8V6 355 aaPredicted RBP16.69■□□□□ 0.26
ITGB4-202ENST00000449880 PANK1Q8TE04 598 aa16.69■□□□□ 0.26
ITGB4-202ENST00000449880 DDX58O95786 925 aaKnown RBP16.69■□□□□ 0.26
ITGB4-202ENST00000449880 PDE4CQ08493 712 aa16.68■□□□□ 0.26
ITGB4-202ENST00000449880 CCDC112Q8NEF3 446 aa16.68■□□□□ 0.26
ITGB4-202ENST00000449880 HMOX1P09601 288 aa16.68■□□□□ 0.26
ITGB4-202ENST00000449880 TCP11L2Q8N4U5 519 aa16.68■□□□□ 0.26
ITGB4-202ENST00000449880 CTDP1Q9Y5B0 961 aaPredicted RBP16.68■□□□□ 0.26
ITGB4-202ENST00000449880 ERC2O15083 957 aa16.68■□□□□ 0.26
ITGB4-202ENST00000449880 PDCP20941 246 aa16.68■□□□□ 0.26
ITGB4-202ENST00000449880 RNF214Q8ND24 703 aa16.68■□□□□ 0.26
ITGB4-202ENST00000449880 PES1O00541 588 aaKnown RBP16.68■□□□□ 0.26
ITGB4-202ENST00000449880 PRPF40AO75400 957 aaKnown RBP16.68■□□□□ 0.26
ITGB4-202ENST00000449880 DCTN1Q14203 1278 aa16.68■□□□□ 0.26
ITGB4-202ENST00000449880 TRIM5Q9C035 493 aa16.68■□□□□ 0.26
ITGB4-202ENST00000449880 PSMA5P28066 241 aa16.67■□□□□ 0.26
ITGB4-202ENST00000449880 PDIA4P13667 645 aaKnown RBP16.67■□□□□ 0.26
ITGB4-202ENST00000449880 MCM5P33992 734 aa16.67■□□□□ 0.26
ITGB4-202ENST00000449880 TCEAL9Q9UHQ7 104 aa16.67■□□□□ 0.26
ITGB4-202ENST00000449880 CCDC192P0DO97 292 aa16.66■□□□□ 0.26
ITGB4-202ENST00000449880 USP8P40818 1118 aa16.66■□□□□ 0.26
ITGB4-202ENST00000449880 PSME1Q06323 249 aa16.66■□□□□ 0.26
ITGB4-202ENST00000449880 OLFM4Q6UX06 510 aa16.65■□□□□ 0.26
ITGB4-202ENST00000449880 CDK19Q9BWU1 502 aa16.65■□□□□ 0.26
ITGB4-202ENST00000449880 EIF2S2P20042 333 aaKnown RBP16.65■□□□□ 0.26
ITGB4-202ENST00000449880 AEBP1Q8IUX7 1158 aa16.65■□□□□ 0.26
ITGB4-202ENST00000449880 WDR33Q9C0J8 1336 aaKnown RBP16.65■□□□□ 0.26
ITGB4-202ENST00000449880 FANCAO15360 1455 aa16.64■□□□□ 0.25
ITGB4-202ENST00000449880 FAM135AQ9P2D6 1515 aa16.64■□□□□ 0.25
ITGB4-202ENST00000449880 H0YHG0 523 aa16.64■□□□□ 0.25
ITGB4-202ENST00000449880 PBRM1Q86U86 1689 aa16.63■□□□□ 0.25
ITGB4-202ENST00000449880 IFIT2P09913 472 aaKnown RBP16.63■□□□□ 0.25
ITGB4-202ENST00000449880 VPS37DQ86XT2 251 aa16.63■□□□□ 0.25
ITGB4-202ENST00000449880 EIF4G3O43432 1585 aaKnown RBP16.63■□□□□ 0.25
ITGB4-202ENST00000449880 ABCA5Q8WWZ7 1642 aa16.63■□□□□ 0.25
ITGB4-202ENST00000449880 KIF2AO00139 706 aaPredicted RBP16.63■□□□□ 0.25
ITGB4-202ENST00000449880 EIF3JO75822 258 aaKnown RBP16.63■□□□□ 0.25
ITGB4-202ENST00000449880 TXNDC2Q86VQ3 553 aa16.62■□□□□ 0.25
ITGB4-202ENST00000449880 CCDC191Q8NCU4 936 aa16.62■□□□□ 0.25
ITGB4-202ENST00000449880 CPLX1O14810 134 aa16.62■□□□□ 0.25
ITGB4-202ENST00000449880 TRDNQ13061 729 aa16.61■□□□□ 0.25
ITGB4-202ENST00000449880 MEX3CQ5U5Q3 659 aaKnown RBP16.61■□□□□ 0.25
ITGB4-202ENST00000449880 CABP1Q9NZU7 370 aa16.61■□□□□ 0.25
ITGB4-202ENST00000449880 ERLIN1O75477 346 aa16.61■□□□□ 0.25
ITGB4-202ENST00000449880 G3BP1Q13283 466 aaKnown RBP eCLIP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms