RNA–Protein interactions for RNA: ENST00000449421.6

NUP85-202, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-202ENST00000449421 TOPAZ1Q8N9V7 1692 aa16.74■□□□□ 0.27
NUP85-202ENST00000449421 ITSN1Q15811 1721 aa16.73■□□□□ 0.27
NUP85-202ENST00000449421 ERICH6BQ5W0A0 696 aa16.73■□□□□ 0.27
NUP85-202ENST00000449421 PELP1Q8IZL8 1130 aaKnown RBP16.73■□□□□ 0.27
NUP85-202ENST00000449421 SMG6Q86US8 1419 aaKnown RBP16.72■□□□□ 0.27
NUP85-202ENST00000449421 NGEFQ8N5V2 710 aa16.72■□□□□ 0.27
NUP85-202ENST00000449421 CFAP53Q96M91 514 aa16.72■□□□□ 0.27
NUP85-202ENST00000449421 POLR3AO14802 1390 aaPredicted RBP16.72■□□□□ 0.27
NUP85-202ENST00000449421 ATP7BP35670 1465 aa16.72■□□□□ 0.27
NUP85-202ENST00000449421 SLAIN2Q9P270 581 aa16.71■□□□□ 0.27
NUP85-202ENST00000449421 NUDCQ9Y266 331 aa16.71■□□□□ 0.27
NUP85-202ENST00000449421 SUPT16HQ9Y5B9 1047 aaKnown RBP16.71■□□□□ 0.27
NUP85-202ENST00000449421 C1orf167Q5SNV9 1468 aa16.71■□□□□ 0.27
NUP85-202ENST00000449421 PRR36Q9H6K5 1346 aa16.7■□□□□ 0.26
NUP85-202ENST00000449421 BLMP54132 1417 aaPredicted RBP16.7■□□□□ 0.26
NUP85-202ENST00000449421 NUDT16Q96DE0 195 aaKnown RBP16.7■□□□□ 0.26
NUP85-202ENST00000449421 TOM1O60784 492 aa16.69■□□□□ 0.26
NUP85-202ENST00000449421 FKBP8Q14318 412 aa16.69■□□□□ 0.26
NUP85-202ENST00000449421 ADAMTS8Q9UP79 889 aa16.69■□□□□ 0.26
NUP85-202ENST00000449421 CCDC61Q9Y6R9 512 aa16.69■□□□□ 0.26
NUP85-202ENST00000449421 A0A1W2PP64 1363 aa16.68■□□□□ 0.26
NUP85-202ENST00000449421 CABP1Q9NZU7 370 aa16.68■□□□□ 0.26
NUP85-202ENST00000449421 KIF1AQ12756 1690 aa16.68■□□□□ 0.26
NUP85-202ENST00000449421 PLEKHG3A1L390 1219 aa16.67■□□□□ 0.26
NUP85-202ENST00000449421 ZNF692Q9BU19 519 aaPredicted RBP16.67■□□□□ 0.26
NUP85-202ENST00000449421 PPIP5K1Q6PFW1 1433 aa16.65■□□□□ 0.26
NUP85-202ENST00000449421 NUTM2FA1L443 756 aa16.65■□□□□ 0.26
NUP85-202ENST00000449421 AKAP12Q02952 1782 aa16.64■□□□□ 0.25
NUP85-202ENST00000449421 UBAP1LF5GYI3 381 aa16.64■□□□□ 0.25
NUP85-202ENST00000449421 ORAI2Q96SN7 254 aa16.64■□□□□ 0.25
NUP85-202ENST00000449421 ROBO1Q9Y6N7 1651 aa16.64■□□□□ 0.25
NUP85-202ENST00000449421 ESCO1Q5FWF5 840 aa16.63■□□□□ 0.25
NUP85-202ENST00000449421 BRINP3Q76B58 766 aa16.63■□□□□ 0.25
NUP85-202ENST00000449421 PHF8Q9UPP1 1060 aa16.63■□□□□ 0.25
NUP85-202ENST00000449421 FYB1O15117 783 aa16.62■□□□□ 0.25
NUP85-202ENST00000449421 NHSL1Q5SYE7 1610 aa16.62■□□□□ 0.25
NUP85-202ENST00000449421 CPSF1Q10570 1443 aaKnown RBP16.62■□□□□ 0.25
NUP85-202ENST00000449421 CD163L1Q9NR16 1453 aa16.61■□□□□ 0.25
NUP85-202ENST00000449421 MTHFSP49914 203 aa16.61■□□□□ 0.25
NUP85-202ENST00000449421 EDC4Q6P2E9 1401 aaKnown RBP16.6■□□□□ 0.25
NUP85-202ENST00000449421 MON2Q7Z3U7 1717 aa16.59■□□□□ 0.25
NUP85-202ENST00000449421 TNNT2P45379 298 aaPredicted RBP16.59■□□□□ 0.25
NUP85-202ENST00000449421 PNNQ9H307 717 aaKnown RBP16.59■□□□□ 0.25
NUP85-202ENST00000449421 ACEP12821 1306 aa16.59■□□□□ 0.25
NUP85-202ENST00000449421 AHDC1Q5TGY3 1603 aaPredicted RBP16.59■□□□□ 0.25
NUP85-202ENST00000449421 PMFBP1Q8TBY8 1022 aa16.58■□□□□ 0.24
NUP85-202ENST00000449421 GGNBP2Q9H3C7 697 aa16.58■□□□□ 0.24
NUP85-202ENST00000449421 TRPM3Q9HCF6 1732 aaPredicted RBP16.56■□□□□ 0.24
NUP85-202ENST00000449421 ANKRD26Q9UPS8 1709 aa16.56■□□□□ 0.24
NUP85-202ENST00000449421 NPHP3Q7Z494 1330 aa16.56■□□□□ 0.24
NUP85-202ENST00000449421 FOXO3O43524 673 aa16.56■□□□□ 0.24
NUP85-202ENST00000449421 NGDNQ8NEJ9 315 aaKnown RBP16.56■□□□□ 0.24
NUP85-202ENST00000449421 RUNDC1Q96C34 613 aa16.56■□□□□ 0.24
NUP85-202ENST00000449421 SALL2Q9Y467 1007 aaPredicted RBP16.56■□□□□ 0.24
NUP85-202ENST00000449421 NRKQ7Z2Y5 1582 aa16.55■□□□□ 0.24
NUP85-202ENST00000449421 PXDNQ92626 1479 aa16.55■□□□□ 0.24
NUP85-202ENST00000449421 SSH2Q76I76 1423 aa16.55■□□□□ 0.24
NUP85-202ENST00000449421 ZBTB22O15209 634 aa16.55■□□□□ 0.24
NUP85-202ENST00000449421 PIP4K2BP78356 416 aa16.55■□□□□ 0.24
NUP85-202ENST00000449421 GOLGA2Q08379 1002 aa16.55■□□□□ 0.24
NUP85-202ENST00000449421 USP6P35125 1406 aa16.54■□□□□ 0.24
NUP85-202ENST00000449421 SOS2Q07890 1332 aaPredicted RBP16.54■□□□□ 0.24
NUP85-202ENST00000449421 RNF123Q5XPI4 1314 aa16.54■□□□□ 0.24
NUP85-202ENST00000449421 PSME1Q06323 249 aa16.54■□□□□ 0.24
NUP85-202ENST00000449421 PHLPP1O60346 1717 aa16.53■□□□□ 0.24
NUP85-202ENST00000449421 COG3Q96JB2 828 aa16.53■□□□□ 0.24
NUP85-202ENST00000449421 SBNO1A3KN83 1393 aa16.52■□□□□ 0.24
NUP85-202ENST00000449421 KRT28Q7Z3Y7 464 aa16.52■□□□□ 0.24
NUP85-202ENST00000449421 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.52■□□□□ 0.24
NUP85-202ENST00000449421 RCAN3Q9UKA8 241 aa16.52■□□□□ 0.24
NUP85-202ENST00000449421 ALS2Q96Q42 1657 aa16.52■□□□□ 0.23
NUP85-202ENST00000449421 KIF20BQ96Q89 1820 aa16.52■□□□□ 0.23
NUP85-202ENST00000449421 APAF1O14727 1248 aa16.51■□□□□ 0.23
NUP85-202ENST00000449421 DDX17Q92841 729 aaKnown RBP16.51■□□□□ 0.23
NUP85-202ENST00000449421 PPP4R2Q9NY27 417 aa16.51■□□□□ 0.23
NUP85-202ENST00000449421 COL16A1Q07092 1604 aaPredicted RBP16.51■□□□□ 0.23
NUP85-202ENST00000449421 ZNF521Q96K83 1311 aa16.5■□□□□ 0.23
NUP85-202ENST00000449421 DIAPH1O60610 1272 aaKnown RBP16.5■□□□□ 0.23
NUP85-202ENST00000449421 CCDC146Q8IYE0 955 aa16.5■□□□□ 0.23
NUP85-202ENST00000449421 FBXO41Q8TF61 875 aa16.5■□□□□ 0.23
NUP85-202ENST00000449421 AATKQ6ZMQ8 1374 aa16.5■□□□□ 0.23
NUP85-202ENST00000449421 U2AF1L5P0DN76 240 aaPredicted RBP16.49■□□□□ 0.23
NUP85-202ENST00000449421 U2AF1Q01081 240 aaKnown RBP eCLIP16.49■□□□□ 0.23
NUP85-202ENST00000449421 TTC21BQ7Z4L5 1316 aa16.48■□□□□ 0.23
NUP85-202ENST00000449421 TTC21AQ8NDW8 1320 aa16.48■□□□□ 0.23
NUP85-202ENST00000449421 E9PSI1 815 aa16.48■□□□□ 0.23
NUP85-202ENST00000449421 NEFMP07197 916 aa16.48■□□□□ 0.23
NUP85-202ENST00000449421 CCDC27Q2M243 656 aa16.48■□□□□ 0.23
NUP85-202ENST00000449421 USP54Q70EL1 1684 aa16.48■□□□□ 0.23
NUP85-202ENST00000449421 PNPLA6Q8IY17 1366 aa16.48■□□□□ 0.23
NUP85-202ENST00000449421 SPATA31A3Q5VYP0 1347 aa16.47■□□□□ 0.23
NUP85-202ENST00000449421 SENP3-EIF4A1A0A087X0R7 540 aa16.47■□□□□ 0.23
NUP85-202ENST00000449421 SLFN5Q08AF3 891 aa16.47■□□□□ 0.23
NUP85-202ENST00000449421 LRRC59Q96AG4 307 aaKnown RBP16.47■□□□□ 0.23
NUP85-202ENST00000449421 PIK3C2AO00443 1686 aa16.46■□□□□ 0.23
NUP85-202ENST00000449421 SHPRHQ149N8 1683 aa16.46■□□□□ 0.23
NUP85-202ENST00000449421 XPCQ01831 940 aaPredicted RBP16.46■□□□□ 0.23
NUP85-202ENST00000449421 WDR63Q8IWG1 891 aa16.46■□□□□ 0.23
NUP85-202ENST00000449421 CDCA7LQ96GN5 454 aa16.46■□□□□ 0.23
NUP85-202ENST00000449421 TNS3Q68CZ2 1445 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms