RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 BRINP3Q76B58 766 aa10.48□□□□□ -0.73
AC004540.1-206ENST00000448056 PMFBP1Q8TBY8 1022 aa10.48□□□□□ -0.73
AC004540.1-206ENST00000448056 TMC1Q8TDI8 760 aa10.48□□□□□ -0.73
AC004540.1-206ENST00000448056 SLC12A5Q9H2X9 1139 aa10.48□□□□□ -0.73
AC004540.1-206ENST00000448056 PHF8Q9UPP1 1060 aa10.48□□□□□ -0.73
AC004540.1-206ENST00000448056 KIF7Q2M1P5 1343 aa10.48□□□□□ -0.73
AC004540.1-206ENST00000448056 ATAD2Q6PL18 1390 aa10.48□□□□□ -0.73
AC004540.1-206ENST00000448056 POLR3GLQ9BT43 218 aa10.47□□□□□ -0.73
AC004540.1-206ENST00000448056 WASHC2AQ641Q2 1341 aa10.47□□□□□ -0.73
AC004540.1-206ENST00000448056 ZNF316A6NFI3 1004 aaPredicted RBP10.46□□□□□ -0.73
AC004540.1-206ENST00000448056 FOXO3O43524 673 aa10.46□□□□□ -0.73
AC004540.1-206ENST00000448056 PLCD3Q8N3E9 789 aa10.46□□□□□ -0.73
AC004540.1-206ENST00000448056 NGDNQ8NEJ9 315 aaKnown RBP10.46□□□□□ -0.73
AC004540.1-206ENST00000448056 ATP7BP35670 1465 aa10.46□□□□□ -0.74
AC004540.1-206ENST00000448056 FMN2Q9NZ56 1722 aa10.46□□□□□ -0.74
AC004540.1-206ENST00000448056 PPIP5K1Q6PFW1 1433 aa10.45□□□□□ -0.74
AC004540.1-206ENST00000448056 CCDC7Q96M83 1385 aa10.45□□□□□ -0.74
AC004540.1-206ENST00000448056 ACEP12821 1306 aa10.45□□□□□ -0.74
AC004540.1-206ENST00000448056 PSME1Q06323 249 aa10.45□□□□□ -0.74
AC004540.1-206ENST00000448056 USP32Q8NFA0 1604 aa10.44□□□□□ -0.74
AC004540.1-206ENST00000448056 NINLQ9Y2I6 1382 aa10.44□□□□□ -0.74
AC004540.1-206ENST00000448056 DDX17Q92841 729 aaKnown RBP10.44□□□□□ -0.74
AC004540.1-206ENST00000448056 POLR3AO14802 1390 aaPredicted RBP10.43□□□□□ -0.74
AC004540.1-206ENST00000448056 KRT28Q7Z3Y7 464 aa10.43□□□□□ -0.74
AC004540.1-206ENST00000448056 HDGFL2Q7Z4V5 671 aaPredicted RBP10.43□□□□□ -0.74
AC004540.1-206ENST00000448056 TERF2IPQ9NYB0 399 aa10.43□□□□□ -0.74
AC004540.1-206ENST00000448056 NPHP3Q7Z494 1330 aa10.42□□□□□ -0.74
AC004540.1-206ENST00000448056 XPCQ01831 940 aaPredicted RBP10.42□□□□□ -0.74
AC004540.1-206ENST00000448056 PANK3Q9H999 370 aa10.42□□□□□ -0.74
AC004540.1-206ENST00000448056 RGPD8O14715 1765 aaPredicted RBP10.42□□□□□ -0.74
AC004540.1-206ENST00000448056 CPSF1Q10570 1443 aaKnown RBP10.41□□□□□ -0.74
AC004540.1-206ENST00000448056 CARD14Q9BXL6 1004 aa10.41□□□□□ -0.74
AC004540.1-206ENST00000448056 CREBZFQ9NS37 354 aa10.41□□□□□ -0.74
AC004540.1-206ENST00000448056 SOS2Q07890 1332 aaPredicted RBP10.4□□□□□ -0.74
AC004540.1-206ENST00000448056 CD163L1Q9NR16 1453 aa10.4□□□□□ -0.74
AC004540.1-206ENST00000448056 A0A1W2PP64 1363 aa10.39□□□□□ -0.75
AC004540.1-206ENST00000448056 KTN1Q86UP2 1357 aaKnown RBP10.39□□□□□ -0.75
AC004540.1-206ENST00000448056 ANKRD36BQ8N2N9 1353 aa10.39□□□□□ -0.75
AC004540.1-206ENST00000448056 TOPAZ1Q8N9V7 1692 aa10.39□□□□□ -0.75
AC004540.1-206ENST00000448056 ROBO1Q9Y6N7 1651 aa10.39□□□□□ -0.75
AC004540.1-206ENST00000448056 PAK3O75914 559 aaPredicted RBP10.39□□□□□ -0.75
AC004540.1-206ENST00000448056 PLEKHG5O94827 1062 aa10.39□□□□□ -0.75
AC004540.1-206ENST00000448056 AMER1Q5JTC6 1135 aaPredicted RBP10.39□□□□□ -0.75
AC004540.1-206ENST00000448056 LRRC59Q96AG4 307 aaKnown RBP10.39□□□□□ -0.75
AC004540.1-206ENST00000448056 HSPA1LP34931 641 aa10.38□□□□□ -0.75
AC004540.1-206ENST00000448056 DDX10Q13206 875 aaKnown RBP10.38□□□□□ -0.75
AC004540.1-206ENST00000448056 CHRDL2Q6WN34 429 aa10.38□□□□□ -0.75
AC004540.1-206ENST00000448056 KLHL34Q8N239 644 aa10.38□□□□□ -0.75
AC004540.1-206ENST00000448056 SBNO1A3KN83 1393 aa10.38□□□□□ -0.75
AC004540.1-206ENST00000448056 BRD4O60885 1362 aaPredicted RBP10.38□□□□□ -0.75
AC004540.1-206ENST00000448056 KIF1AQ12756 1690 aa10.38□□□□□ -0.75
AC004540.1-206ENST00000448056 TTC21BQ7Z4L5 1316 aa10.37□□□□□ -0.75
AC004540.1-206ENST00000448056 PXDNQ92626 1479 aa10.37□□□□□ -0.75
AC004540.1-206ENST00000448056 PER1O15534 1290 aaPredicted RBP10.37□□□□□ -0.75
AC004540.1-206ENST00000448056 USP6P35125 1406 aa10.37□□□□□ -0.75
AC004540.1-206ENST00000448056 ITSN1Q15811 1721 aa10.37□□□□□ -0.75
AC004540.1-206ENST00000448056 SSH2Q76I76 1423 aa10.37□□□□□ -0.75
AC004540.1-206ENST00000448056 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.37□□□□□ -0.75
AC004540.1-206ENST00000448056 RTN4Q9NQC3 1192 aaKnown RBP10.37□□□□□ -0.75
AC004540.1-206ENST00000448056 SPATA31A3Q5VYP0 1347 aa10.36□□□□□ -0.75
AC004540.1-206ENST00000448056 FXR2P51116 673 aaKnown RBP eCLIP10.36□□□□□ -0.75
AC004540.1-206ENST00000448056 LMOD2Q6P5Q4 547 aa10.36□□□□□ -0.75
AC004540.1-206ENST00000448056 ABTB2Q8N961 1025 aa10.36□□□□□ -0.75
AC004540.1-206ENST00000448056 KNSTRNQ9Y448 316 aa10.36□□□□□ -0.75
AC004540.1-206ENST00000448056 AHDC1Q5TGY3 1603 aaPredicted RBP10.36□□□□□ -0.75
AC004540.1-206ENST00000448056 TTC21AQ8NDW8 1320 aa10.35□□□□□ -0.75
AC004540.1-206ENST00000448056 EDC4Q6P2E9 1401 aaKnown RBP10.35□□□□□ -0.75
AC004540.1-206ENST00000448056 FYB1O15117 783 aa10.35□□□□□ -0.75
AC004540.1-206ENST00000448056 MNX1P50219 401 aaPredicted RBP10.35□□□□□ -0.75
AC004540.1-206ENST00000448056 ZBTB47Q9UFB7 747 aaPredicted RBP10.35□□□□□ -0.75
AC004540.1-206ENST00000448056 MYOM1P52179 1685 aa10.34□□□□□ -0.75
AC004540.1-206ENST00000448056 NUTM2GQ5VZR2 741 aa10.34□□□□□ -0.75
AC004540.1-206ENST00000448056 NME9Q86XW9 330 aa10.34□□□□□ -0.75
AC004540.1-206ENST00000448056 SPOCK2Q92563 424 aa10.34□□□□□ -0.75
AC004540.1-206ENST00000448056 CGNL1Q0VF96 1302 aa10.33□□□□□ -0.76
AC004540.1-206ENST00000448056 NSD3Q9BZ95 1437 aa10.33□□□□□ -0.76
AC004540.1-206ENST00000448056 NHSL1Q5SYE7 1610 aa10.33□□□□□ -0.76
AC004540.1-206ENST00000448056 NLRP6P59044 892 aa10.33□□□□□ -0.76
AC004540.1-206ENST00000448056 NLRP13Q86W25 1043 aa10.33□□□□□ -0.76
AC004540.1-206ENST00000448056 ZRANB1Q9UGI0 708 aa10.33□□□□□ -0.76
AC004540.1-206ENST00000448056 ARHGEF10O15013 1369 aa10.33□□□□□ -0.76
AC004540.1-206ENST00000448056 TNS3Q68CZ2 1445 aa10.33□□□□□ -0.76
AC004540.1-206ENST00000448056 AKAP12Q02952 1782 aa10.32□□□□□ -0.76
AC004540.1-206ENST00000448056 GGNBP2Q9H3C7 697 aa10.32□□□□□ -0.76
AC004540.1-206ENST00000448056 PHLPP1O60346 1717 aa10.32□□□□□ -0.76
AC004540.1-206ENST00000448056 USP31Q70CQ4 1352 aa10.31□□□□□ -0.76
AC004540.1-206ENST00000448056 JCADQ9P266 1359 aa10.31□□□□□ -0.76
AC004540.1-206ENST00000448056 CABLES1Q8TDN4 633 aa10.31□□□□□ -0.76
AC004540.1-206ENST00000448056 COG3Q96JB2 828 aa10.31□□□□□ -0.76
AC004540.1-206ENST00000448056 COL16A1Q07092 1604 aaPredicted RBP10.31□□□□□ -0.76
AC004540.1-206ENST00000448056 TRPM3Q9HCF6 1732 aaPredicted RBP10.3□□□□□ -0.76
AC004540.1-206ENST00000448056 PNPLA6Q8IY17 1366 aa10.3□□□□□ -0.76
AC004540.1-206ENST00000448056 MON2Q7Z3U7 1717 aa10.3□□□□□ -0.76
AC004540.1-206ENST00000448056 GCP02774 474 aa10.29□□□□□ -0.76
AC004540.1-206ENST00000448056 CC2D1BQ5T0F9 858 aaKnown RBP10.29□□□□□ -0.76
AC004540.1-206ENST00000448056 PIP4P2Q8N4L2 257 aa10.29□□□□□ -0.76
AC004540.1-206ENST00000448056 USP19O94966 1318 aa10.29□□□□□ -0.76
AC004540.1-206ENST00000448056 NPC1L1Q9UHC9 1359 aa10.28□□□□□ -0.76
AC004540.1-206ENST00000448056 NRKQ7Z2Y5 1582 aa10.28□□□□□ -0.76
AC004540.1-206ENST00000448056 NUTM2BA6NNL0 878 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms