RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 NOC3LQ8WTT2 800 aaKnown RBP21.67■■□□□ 1.06
ATG9A-215ENST00000446716 GOLGA6L3A6NEY3 463 aa21.66■■□□□ 1.06
ATG9A-215ENST00000446716 KCNH5Q8NCM2 988 aa21.65■■□□□ 1.06
ATG9A-215ENST00000446716 BICRAQ9NZM4 1560 aa21.65■■□□□ 1.06
ATG9A-215ENST00000446716 WAPLQ7Z5K2 1190 aa21.65■■□□□ 1.06
ATG9A-215ENST00000446716 SUPT6HQ7KZ85 1726 aaKnown RBP21.65■■□□□ 1.06
ATG9A-215ENST00000446716 SLC4A2P04920 1241 aa21.65■■□□□ 1.06
ATG9A-215ENST00000446716 PDE4CQ08493 712 aa21.64■■□□□ 1.06
ATG9A-215ENST00000446716 FSD1Q9BTV5 496 aa21.64■■□□□ 1.06
ATG9A-215ENST00000446716 CNNM1Q9NRU3 951 aa21.64■■□□□ 1.06
ATG9A-215ENST00000446716 WWC1Q8IX03 1113 aa21.63■■□□□ 1.05
ATG9A-215ENST00000446716 FBXO31Q5XUX0 539 aaPredicted RBP21.63■■□□□ 1.05
ATG9A-215ENST00000446716 DDX11L8A8MPP1 907 aa21.62■■□□□ 1.05
ATG9A-215ENST00000446716 TSR2Q969E8 191 aaKnown RBP21.62■■□□□ 1.05
ATG9A-215ENST00000446716 TPM3P06753 285 aa21.61■■□□□ 1.05
ATG9A-215ENST00000446716 DDX49Q9Y6V7 483 aaKnown RBP21.61■■□□□ 1.05
ATG9A-215ENST00000446716 CDCA7LQ96GN5 454 aa21.61■■□□□ 1.05
ATG9A-215ENST00000446716 CCDC43Q96MW1 224 aaKnown RBP21.61■■□□□ 1.05
ATG9A-215ENST00000446716 CCDC47Q96A33 483 aaKnown RBP21.61■■□□□ 1.05
ATG9A-215ENST00000446716 MYL6BP14649 208 aa21.6■■□□□ 1.05
ATG9A-215ENST00000446716 DNAJC2Q99543 621 aaKnown RBP21.6■■□□□ 1.05
ATG9A-215ENST00000446716 BECN2A8MW95 431 aa21.6■■□□□ 1.05
ATG9A-215ENST00000446716 DEKP35659 375 aaKnown RBP21.6■■□□□ 1.05
ATG9A-215ENST00000446716 SAFBQ15424 915 aaKnown RBP eCLIP21.6■■□□□ 1.05
ATG9A-215ENST00000446716 CNTROBQ8N137 903 aa21.6■■□□□ 1.05
ATG9A-215ENST00000446716 AMOTL2Q9Y2J4 779 aa21.6■■□□□ 1.05
ATG9A-215ENST00000446716 NINLQ9Y2I6 1382 aa21.59■■□□□ 1.05
ATG9A-215ENST00000446716 GNAI2P04899 355 aa21.59■■□□□ 1.05
ATG9A-215ENST00000446716 GNL3LQ9NVN8 582 aaKnown RBP21.59■■□□□ 1.05
ATG9A-215ENST00000446716 SLC4A3P48751 1232 aa21.58■■□□□ 1.05
ATG9A-215ENST00000446716 TSR1Q2NL82 804 aaKnown RBP21.58■■□□□ 1.05
ATG9A-215ENST00000446716 DENND4BO75064 1496 aaPredicted RBP21.58■■□□□ 1.05
ATG9A-215ENST00000446716 GOLGA6L19H0YKK7 550 aa21.58■■□□□ 1.04
ATG9A-215ENST00000446716 TPM2P07951 284 aa21.58■■□□□ 1.04
ATG9A-215ENST00000446716 IKQ13123 557 aaPredicted RBP21.58■■□□□ 1.04
ATG9A-215ENST00000446716 MTMR7Q9Y216 660 aa21.58■■□□□ 1.04
ATG9A-215ENST00000446716 ERC1Q8IUD2 1116 aa21.58■■□□□ 1.04
ATG9A-215ENST00000446716 SRCIN1Q9C0H9 1055 aa21.58■■□□□ 1.04
ATG9A-215ENST00000446716 VPS37CA5D8V6 355 aaPredicted RBP21.57■■□□□ 1.04
ATG9A-215ENST00000446716 FOXO3O43524 673 aa21.57■■□□□ 1.04
ATG9A-215ENST00000446716 IDI1Q13907 227 aa21.57■■□□□ 1.04
ATG9A-215ENST00000446716 TSHZ2Q9NRE2 1034 aa21.57■■□□□ 1.04
ATG9A-215ENST00000446716 SMC3Q9UQE7 1217 aa21.57■■□□□ 1.04
ATG9A-215ENST00000446716 ZNF608Q9ULD9 1512 aaPredicted RBP21.56■■□□□ 1.04
ATG9A-215ENST00000446716 BTBD11A6QL63 1104 aa21.56■■□□□ 1.04
ATG9A-215ENST00000446716 PRM3Q9NNZ6 103 aa21.56■■□□□ 1.04
ATG9A-215ENST00000446716 PHF8Q9UPP1 1060 aa21.56■■□□□ 1.04
ATG9A-215ENST00000446716 AKNAQ7Z591 1439 aa21.56■■□□□ 1.04
ATG9A-215ENST00000446716 DMRT2Q9Y5R5 561 aa21.56■■□□□ 1.04
ATG9A-215ENST00000446716 CDC45O75419 566 aa21.56■■□□□ 1.04
ATG9A-215ENST00000446716 ADAMTS2O95450 1211 aa21.56■■□□□ 1.04
ATG9A-215ENST00000446716 CAMSAP2Q08AD1 1489 aa21.56■■□□□ 1.04
ATG9A-215ENST00000446716 CCDC158Q5M9N0 1113 aa21.55■■□□□ 1.04
ATG9A-215ENST00000446716 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.55■■□□□ 1.04
ATG9A-215ENST00000446716 MPHOSPH8Q99549 860 aa21.55■■□□□ 1.04
ATG9A-215ENST00000446716 CCT4P50991 539 aaKnown RBP21.55■■□□□ 1.04
ATG9A-215ENST00000446716 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
ATG9A-215ENST00000446716 HMGB2P26583 209 aaKnown RBP21.54■■□□□ 1.04
ATG9A-215ENST00000446716 SART3Q15020 963 aaKnown RBP21.54■■□□□ 1.04
ATG9A-215ENST00000446716 ZNF428Q96B54 188 aa21.54■■□□□ 1.04
ATG9A-215ENST00000446716 FCHSD2O94868 740 aa21.54■■□□□ 1.04
ATG9A-215ENST00000446716 PPP6R1Q9UPN7 881 aa21.54■■□□□ 1.04
ATG9A-215ENST00000446716 CUL7Q14999 1698 aa21.54■■□□□ 1.04
ATG9A-215ENST00000446716 BICD2Q8TD16 824 aa21.53■■□□□ 1.04
ATG9A-215ENST00000446716 NOB1Q9ULX3 412 aaKnown RBP21.53■■□□□ 1.04
ATG9A-215ENST00000446716 NAIPQ13075 1403 aa21.53■■□□□ 1.04
ATG9A-215ENST00000446716 TTC39AQ5SRH9 613 aa21.53■■□□□ 1.04
ATG9A-215ENST00000446716 C1orf115Q9H7X2 142 aa21.53■■□□□ 1.04
ATG9A-215ENST00000446716 KIF14Q15058 1648 aa21.53■■□□□ 1.04
ATG9A-215ENST00000446716 FOSBP53539 338 aa21.52■■□□□ 1.04
ATG9A-215ENST00000446716 TPM1P09493 284 aa21.52■■□□□ 1.04
ATG9A-215ENST00000446716 CCDC57Q2TAC2 916 aa21.52■■□□□ 1.04
ATG9A-215ENST00000446716 NSD3Q9BZ95 1437 aa21.52■■□□□ 1.04
ATG9A-215ENST00000446716 SLC3A2P08195 630 aaKnown RBP21.51■■□□□ 1.03
ATG9A-215ENST00000446716 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.51■■□□□ 1.03
ATG9A-215ENST00000446716 PSMA5P28066 241 aa21.51■■□□□ 1.03
ATG9A-215ENST00000446716 WDR63Q8IWG1 891 aa21.51■■□□□ 1.03
ATG9A-215ENST00000446716 FANCAO15360 1455 aa21.51■■□□□ 1.03
ATG9A-215ENST00000446716 SIL1Q9H173 461 aa21.51■■□□□ 1.03
ATG9A-215ENST00000446716 HOOK1Q9UJC3 728 aaKnown RBP21.51■■□□□ 1.03
ATG9A-215ENST00000446716 STARD3NLO95772 234 aa21.5■■□□□ 1.03
ATG9A-215ENST00000446716 XBP1P17861 261 aa21.5■■□□□ 1.03
ATG9A-215ENST00000446716 BICDL1Q6ZP65 573 aa21.5■■□□□ 1.03
ATG9A-215ENST00000446716 NGLY1Q96IV0 654 aa21.5■■□□□ 1.03
ATG9A-215ENST00000446716 BRMS1Q9HCU9 246 aa21.5■■□□□ 1.03
ATG9A-215ENST00000446716 SKOR2Q2VWA4 1001 aaPredicted RBP21.5■■□□□ 1.03
ATG9A-215ENST00000446716 GNAT3A8MTJ3 354 aa21.49■■□□□ 1.03
ATG9A-215ENST00000446716 HIP1O00291 1037 aa21.49■■□□□ 1.03
ATG9A-215ENST00000446716 ANKRD20A12PQ8NF67 263 aa21.48■■□□□ 1.03
ATG9A-215ENST00000446716 C22orf23Q9BZE7 217 aa21.48■■□□□ 1.03
ATG9A-215ENST00000446716 ABCC5O15440 1437 aa21.48■■□□□ 1.03
ATG9A-215ENST00000446716 PTCD1O75127 700 aaKnown RBP21.48■■□□□ 1.03
ATG9A-215ENST00000446716 CCAR1Q8IX12 1150 aaKnown RBP21.48■■□□□ 1.03
ATG9A-215ENST00000446716 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.48■■□□□ 1.031e-6■■■■□ 25
ATG9A-215ENST00000446716 CT47B1P0C2W7 299 aaPredicted RBP21.47■■□□□ 1.03
ATG9A-215ENST00000446716 PCMTD1Q96MG8 357 aaPredicted RBP21.47■■□□□ 1.03
ATG9A-215ENST00000446716 TMOD3Q9NYL9 352 aa21.47■■□□□ 1.03
ATG9A-215ENST00000446716 NFE2L2Q16236 605 aa21.47■■□□□ 1.03
ATG9A-215ENST00000446716 RRP12Q5JTH9 1297 aaKnown RBP21.47■■□□□ 1.03
ATG9A-215ENST00000446716 WASLO00401 505 aaPredicted RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms