RNA–Protein interactions for RNA: ENST00000446488.7

NFRKB-201, Transcript of nuclear factor related to kappaB binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NFRKB, Length 5,093 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-201ENST00000446488 KRT28Q7Z3Y7 464 aa13.4□□□□□ -0.26
NFRKB-201ENST00000446488 ANKRD45Q5TZF3 282 aa13.4□□□□□ -0.26
NFRKB-201ENST00000446488 TMOD3Q9NYL9 352 aa13.4□□□□□ -0.26
NFRKB-201ENST00000446488 CCDC7Q96M83 1385 aa13.4□□□□□ -0.26
NFRKB-201ENST00000446488 CHMP5Q9NZZ3 219 aa13.4□□□□□ -0.26
NFRKB-201ENST00000446488 TBC1D2BQ9UPU7 963 aa13.4□□□□□ -0.26
NFRKB-201ENST00000446488 TIAM1Q13009 1591 aa13.4□□□□□ -0.26
NFRKB-201ENST00000446488 NBPF1Q3BBV0 1214 aa13.4□□□□□ -0.27
NFRKB-201ENST00000446488 FOXD4L1Q9NU39 408 aa13.4□□□□□ -0.27
NFRKB-201ENST00000446488 WDR7Q9Y4E6 1490 aa13.39□□□□□ -0.27
NFRKB-201ENST00000446488 ZPR1O75312 459 aa13.39□□□□□ -0.27
NFRKB-201ENST00000446488 DZIP1LQ8IYY4 767 aaKnown RBP13.39□□□□□ -0.27
NFRKB-201ENST00000446488 ZKSCAN1P17029 563 aaPredicted RBP13.39□□□□□ -0.27
NFRKB-201ENST00000446488 GNAI3P08754 354 aa13.38□□□□□ -0.27
NFRKB-201ENST00000446488 KIF7Q2M1P5 1343 aa13.38□□□□□ -0.27
NFRKB-201ENST00000446488 WAPLQ7Z5K2 1190 aa13.38□□□□□ -0.27
NFRKB-201ENST00000446488 CNNM1Q9NRU3 951 aa13.38□□□□□ -0.27
NFRKB-201ENST00000446488 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.37□□□□□ -0.27
NFRKB-201ENST00000446488 AMER1Q5JTC6 1135 aaPredicted RBP13.37□□□□□ -0.27
NFRKB-201ENST00000446488 HDGFL1Q5TGJ6 251 aa13.37□□□□□ -0.27
NFRKB-201ENST00000446488 RNF20Q5VTR2 975 aa13.37□□□□□ -0.27
NFRKB-201ENST00000446488 NPHP3Q7Z494 1330 aa13.37□□□□□ -0.27
NFRKB-201ENST00000446488 WDHD1O75717 1129 aaPredicted RBP13.37□□□□□ -0.27
NFRKB-201ENST00000446488 TNNT3P45378 269 aaPredicted RBP13.37□□□□□ -0.27
NFRKB-201ENST00000446488 TPM4P67936 248 aa13.37□□□□□ -0.27
NFRKB-201ENST00000446488 UHRF1BP1LA0JNW5 1464 aa13.36□□□□□ -0.27
NFRKB-201ENST00000446488 PLCH2O75038 1416 aa13.36□□□□□ -0.27
NFRKB-201ENST00000446488 AMOTQ4VCS5 1084 aa13.36□□□□□ -0.27
NFRKB-201ENST00000446488 TRIM29Q14134 588 aa13.36□□□□□ -0.27
NFRKB-201ENST00000446488 SF3A1Q15459 793 aaKnown RBP13.36□□□□□ -0.27
NFRKB-201ENST00000446488 BCL11BQ9C0K0 894 aaPredicted RBP13.36□□□□□ -0.27
NFRKB-201ENST00000446488 ZNF518AQ6AHZ1 1483 aa13.36□□□□□ -0.27
NFRKB-201ENST00000446488 FAM184AQ8NB25 1140 aa13.36□□□□□ -0.27
NFRKB-201ENST00000446488 MPHOSPH8Q99549 860 aa13.36□□□□□ -0.27
NFRKB-201ENST00000446488 SAMD1Q6SPF0 538 aaPredicted RBP13.35□□□□□ -0.27
NFRKB-201ENST00000446488 WASLO00401 505 aaPredicted RBP13.35□□□□□ -0.27
NFRKB-201ENST00000446488 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.35□□□□□ -0.27
NFRKB-201ENST00000446488 CCDC43Q96MW1 224 aaKnown RBP13.35□□□□□ -0.27
NFRKB-201ENST00000446488 LMTK3Q96Q04 1460 aa13.35□□□□□ -0.27
NFRKB-201ENST00000446488 SLC3A2P08195 630 aaKnown RBP13.35□□□□□ -0.27
NFRKB-201ENST00000446488 WASHC4Q2M389 1173 aa13.35□□□□□ -0.27
NFRKB-201ENST00000446488 CPLX1O14810 134 aa13.34□□□□□ -0.27
NFRKB-201ENST00000446488 H3BQV1 296 aa13.34□□□□□ -0.27
NFRKB-201ENST00000446488 IFFO2Q5TF58 517 aa13.34□□□□□ -0.27
NFRKB-201ENST00000446488 FAM43AQ8N2R8 423 aa13.34□□□□□ -0.27
NFRKB-201ENST00000446488 COG6Q9Y2V7 657 aa13.34□□□□□ -0.27
NFRKB-201ENST00000446488 BTBD11A6QL63 1104 aa13.33□□□□□ -0.28
NFRKB-201ENST00000446488 HSPA2P54652 639 aa13.33□□□□□ -0.28
NFRKB-201ENST00000446488 IKQ13123 557 aaPredicted RBP13.33□□□□□ -0.28
NFRKB-201ENST00000446488 AAMPQ13685 434 aa13.33□□□□□ -0.28
NFRKB-201ENST00000446488 NFXL1Q6ZNB6 911 aa13.33□□□□□ -0.28
NFRKB-201ENST00000446488 TCP11L2Q8N4U5 519 aa13.33□□□□□ -0.28
NFRKB-201ENST00000446488 FYB1O15117 783 aa13.33□□□□□ -0.28
NFRKB-201ENST00000446488 MRE11P49959 708 aa13.32□□□□□ -0.28
NFRKB-201ENST00000446488 REC8O95072 547 aa13.32□□□□□ -0.28
NFRKB-201ENST00000446488 RRS1Q15050 365 aaKnown RBP13.32□□□□□ -0.28
NFRKB-201ENST00000446488 BICDL1Q6ZP65 573 aa13.32□□□□□ -0.28
NFRKB-201ENST00000446488 RALYLQ86SE5 291 aaKnown RBP13.32□□□□□ -0.28
NFRKB-201ENST00000446488 ERC1Q8IUD2 1116 aa13.32□□□□□ -0.28
NFRKB-201ENST00000446488 CLASRPQ8N2M8 674 aaKnown RBP13.32□□□□□ -0.28
NFRKB-201ENST00000446488 TMOD2Q9NZR1 351 aa13.32□□□□□ -0.28
NFRKB-201ENST00000446488 PPP2R1AP30153 589 aa13.31□□□□□ -0.28
NFRKB-201ENST00000446488 NBPF8Q3BBV2 869 aa13.31□□□□□ -0.28
NFRKB-201ENST00000446488 CCDC158Q5M9N0 1113 aa13.31□□□□□ -0.28
NFRKB-201ENST00000446488 NBPF14Q5TI25 921 aa13.31□□□□□ -0.28
NFRKB-201ENST00000446488 AK7Q96M32 723 aa13.31□□□□□ -0.28
NFRKB-201ENST00000446488 RBM5P52756 815 aaKnown RBP eCLIP13.31□□□□□ -0.28
NFRKB-201ENST00000446488 A2MP01023 1474 aa13.31□□□□□ -0.28
NFRKB-201ENST00000446488 CCDC57Q2TAC2 916 aa13.31□□□□□ -0.28
NFRKB-201ENST00000446488 TWISTNBQ3B726 338 aaPredicted RBP13.31□□□□□ -0.28
NFRKB-201ENST00000446488 C8orf37Q96NL8 207 aa13.3□□□□□ -0.28
NFRKB-201ENST00000446488 BRD4O60885 1362 aaPredicted RBP13.3□□□□□ -0.28
NFRKB-201ENST00000446488 UHRF1BP1Q6BDS2 1440 aa13.3□□□□□ -0.28
NFRKB-201ENST00000446488 LRRC59Q96AG4 307 aaKnown RBP13.3□□□□□ -0.28
NFRKB-201ENST00000446488 C19orf44Q9H6X5 657 aa13.3□□□□□ -0.28
NFRKB-201ENST00000446488 GNAT3A8MTJ3 354 aa13.3□□□□□ -0.28
NFRKB-201ENST00000446488 IGHMBP2P38935 993 aaKnown RBP13.3□□□□□ -0.28
NFRKB-201ENST00000446488 NOL8Q76FK4 1167 aaKnown RBP13.3□□□□□ -0.28
NFRKB-201ENST00000446488 ATP6V1DQ9Y5K8 247 aa13.3□□□□□ -0.28
NFRKB-201ENST00000446488 KDM5BQ9UGL1 1544 aa13.3□□□□□ -0.28
NFRKB-201ENST00000446488 MYL6BP14649 208 aa13.29□□□□□ -0.28
NFRKB-201ENST00000446488 CCDC47Q96A33 483 aaKnown RBP13.29□□□□□ -0.28
NFRKB-201ENST00000446488 ABCC5O15440 1437 aa13.29□□□□□ -0.28
NFRKB-201ENST00000446488 SART3Q15020 963 aaKnown RBP13.29□□□□□ -0.28
NFRKB-201ENST00000446488 TEX13AQ9BXU3 409 aaPredicted RBP13.29□□□□□ -0.28
NFRKB-201ENST00000446488 UNC13AQ9UPW8 1703 aa13.28□□□□□ -0.28
NFRKB-201ENST00000446488 FCHSD2O94868 740 aa13.28□□□□□ -0.28
NFRKB-201ENST00000446488 CNKSR2Q8WXI2 1034 aa13.28□□□□□ -0.28
NFRKB-201ENST00000446488 HSP90AB3PQ58FF7 597 aa13.28□□□□□ -0.28
NFRKB-201ENST00000446488 MPRIPQ6WCQ1 1025 aa13.28□□□□□ -0.28
NFRKB-201ENST00000446488 CEP89Q96ST8 783 aa13.28□□□□□ -0.28
NFRKB-201ENST00000446488 MAP7D2Q96T17 732 aa13.28□□□□□ -0.28
NFRKB-201ENST00000446488 ABCC10Q5T3U5 1492 aa13.28□□□□□ -0.28
NFRKB-201ENST00000446488 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.28□□□□□ -0.283e-7■■■■□ 22.6
NFRKB-201ENST00000446488 PCF11O94913 1555 aaKnown RBP13.28□□□□□ -0.28
NFRKB-201ENST00000446488 ATP10BO94823 1461 aa13.28□□□□□ -0.28
NFRKB-201ENST00000446488 FAM13BQ9NYF5 915 aa13.28□□□□□ -0.28
NFRKB-201ENST00000446488 BRPF3Q9ULD4 1205 aa13.28□□□□□ -0.28
NFRKB-201ENST00000446488 PTCD1O75127 700 aaKnown RBP13.27□□□□□ -0.28
NFRKB-201ENST00000446488 IL27Q8NEV9 243 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms