RNA–Protein interactions for RNA: ENST00000446404.1

AP000402.1-201, humanhuman

TSL 3 BASIC

Gene AP000402.1, Length 540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000402.1-201ENST00000446404 KCNC4Q03721 635 aa12.34□□□□□ -0.43
AP000402.1-201ENST00000446404 ZC3H4Q9UPT8 1303 aaKnown RBP12.34□□□□□ -0.43
AP000402.1-201ENST00000446404 S1PR4O95977 384 aa12.33□□□□□ -0.44
AP000402.1-201ENST00000446404 VAC14Q08AM6 782 aa12.32□□□□□ -0.44
AP000402.1-201ENST00000446404 CCDC82Q8N4S0 544 aa12.31□□□□□ -0.44
AP000402.1-201ENST00000446404 ARMC2Q8NEN0 867 aa12.31□□□□□ -0.44
AP000402.1-201ENST00000446404 CCDC24Q8N4L8 307 aa12.3□□□□□ -0.44
AP000402.1-201ENST00000446404 GPKOWQ92917 476 aaPredicted RBP eCLIP12.29□□□□□ -0.44
AP000402.1-201ENST00000446404 GLMNQ92990 594 aa12.29□□□□□ -0.44
AP000402.1-201ENST00000446404 ARID3AQ99856 593 aa12.29□□□□□ -0.44
AP000402.1-201ENST00000446404 UNC93B1Q9H1C4 597 aa12.28□□□□□ -0.44
AP000402.1-201ENST00000446404 FCF1Q9Y324 198 aaKnown RBP12.28□□□□□ -0.44
AP000402.1-201ENST00000446404 NR1H3Q13133 447 aa12.27□□□□□ -0.45
AP000402.1-201ENST00000446404 MMRN1Q13201 1228 aa12.27□□□□□ -0.45
AP000402.1-201ENST00000446404 PTCRAQ6ISU1 281 aaPredicted RBP12.27□□□□□ -0.45
AP000402.1-201ENST00000446404 CCDC97Q96F63 343 aaPredicted RBP12.27□□□□□ -0.45
AP000402.1-201ENST00000446404 CALR3Q96L12 384 aaKnown RBP12.27□□□□□ -0.45
AP000402.1-201ENST00000446404 ARXQ96QS3 562 aa12.27□□□□□ -0.45
AP000402.1-201ENST00000446404 SERPINA10Q9UK55 444 aa12.27□□□□□ -0.45
AP000402.1-201ENST00000446404 ZBBXA8MT70 800 aa12.26□□□□□ -0.45
AP000402.1-201ENST00000446404 NBPF14Q5TI25 921 aa12.26□□□□□ -0.45
AP000402.1-201ENST00000446404 ADAMTS19Q8TE59 1207 aa12.26□□□□□ -0.45
AP000402.1-201ENST00000446404 FBXO45P0C2W1 286 aa12.25□□□□□ -0.45
AP000402.1-201ENST00000446404 SOX11P35716 441 aa12.25□□□□□ -0.45
AP000402.1-201ENST00000446404 PDXDC2PQ6P474 469 aa12.25□□□□□ -0.45
AP000402.1-201ENST00000446404 GPSM3Q9Y4H4 160 aa12.25□□□□□ -0.45
AP000402.1-201ENST00000446404 HDGFL1Q5TGJ6 251 aa12.24□□□□□ -0.45
AP000402.1-201ENST00000446404 ALG2Q9H553 416 aa12.23□□□□□ -0.45
AP000402.1-201ENST00000446404 GGCXP38435 758 aa12.22□□□□□ -0.45
AP000402.1-201ENST00000446404 EIF4G2P78344 907 aaKnown RBP eCLIP12.22□□□□□ -0.45
AP000402.1-201ENST00000446404 PTK2Q05397 1052 aa12.22□□□□□ -0.45
AP000402.1-201ENST00000446404 RNF223E7ERA6 249 aa12.21□□□□□ -0.45
AP000402.1-201ENST00000446404 PPEF1O14829 653 aaPredicted RBP12.21□□□□□ -0.45
AP000402.1-201ENST00000446404 ANKLE1Q8NAG6 615 aa12.2□□□□□ -0.46
AP000402.1-201ENST00000446404 SEMA3FQ13275 785 aa12.19□□□□□ -0.46
AP000402.1-201ENST00000446404 OCSTAMPQ9BR26 566 aa12.19□□□□□ -0.46
AP000402.1-201ENST00000446404 SH3BP5LQ7L8J4 393 aa12.18□□□□□ -0.46
AP000402.1-201ENST00000446404 BAP1Q92560 729 aa12.18□□□□□ -0.46
AP000402.1-201ENST00000446404 PPP1R18Q6NYC8 613 aa12.17□□□□□ -0.46
AP000402.1-201ENST00000446404 HOMEZQ8IX15 550 aa12.17□□□□□ -0.46
AP000402.1-201ENST00000446404 ARHGAP9Q9BRR9 750 aa12.17□□□□□ -0.46
AP000402.1-201ENST00000446404 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.17□□□□□ -0.46
AP000402.1-201ENST00000446404 LINC01559Q495D7 138 aa12.15□□□□□ -0.46
AP000402.1-201ENST00000446404 PLA2G2CQ5R387 149 aa12.15□□□□□ -0.46
AP000402.1-201ENST00000446404 SH3RF1Q7Z6J0 888 aa12.15□□□□□ -0.46
AP000402.1-201ENST00000446404 ZNF511Q8NB15 262 aa12.15□□□□□ -0.46
AP000402.1-201ENST00000446404 ZBTB24O43167 697 aaPredicted RBP12.14□□□□□ -0.47
AP000402.1-201ENST00000446404 IFFO2Q5TF58 517 aa12.14□□□□□ -0.47
AP000402.1-201ENST00000446404 ADAM32Q8TC27 787 aa12.14□□□□□ -0.47
AP000402.1-201ENST00000446404 ZNF592Q92610 1267 aa12.14□□□□□ -0.47
AP000402.1-201ENST00000446404 BPHLQ86WA6 291 aaPredicted RBP12.13□□□□□ -0.47
AP000402.1-201ENST00000446404 UCN2Q96RP3 112 aa12.13□□□□□ -0.47
AP000402.1-201ENST00000446404 MCCD1P59942 119 aaPredicted RBP12.12□□□□□ -0.47
AP000402.1-201ENST00000446404 ZBTB33Q86T24 672 aa12.12□□□□□ -0.47
AP000402.1-201ENST00000446404 FOXJ1Q92949 421 aa12.12□□□□□ -0.47
AP000402.1-201ENST00000446404 TRIM32Q13049 653 aa12.11□□□□□ -0.47
AP000402.1-201ENST00000446404 PPP1R12CQ9BZL4 782 aa12.11□□□□□ -0.47
AP000402.1-201ENST00000446404 MAGEB6P1A0A0J9YX57 407 aa12.1□□□□□ -0.47
AP000402.1-201ENST00000446404 RPIAP49247 311 aa12.1□□□□□ -0.47
AP000402.1-201ENST00000446404 SH3BP2P78314 561 aa12.1□□□□□ -0.47
AP000402.1-201ENST00000446404 AGERQ15109 404 aa12.1□□□□□ -0.47
AP000402.1-201ENST00000446404 CARD14Q9BXL6 1004 aa12.1□□□□□ -0.47
AP000402.1-201ENST00000446404 PCDHB9Q9Y5E1 797 aa12.1□□□□□ -0.47
AP000402.1-201ENST00000446404 C4orf48Q5BLP8 95 aa12.09□□□□□ -0.47
AP000402.1-201ENST00000446404 CFAP70Q5T0N1 1121 aa12.08□□□□□ -0.48
AP000402.1-201ENST00000446404 PALM3A6NDB9 673 aaPredicted RBP12.07□□□□□ -0.48
AP000402.1-201ENST00000446404 ERFEQ4G0M1 354 aa12.07□□□□□ -0.48
AP000402.1-201ENST00000446404 C1QTNF2Q9BXJ5 285 aa12.07□□□□□ -0.48
AP000402.1-201ENST00000446404 WNT7BP56706 349 aa12.06□□□□□ -0.48
AP000402.1-201ENST00000446404 DZIP3Q86Y13 1208 aaKnown RBP12.06□□□□□ -0.48
AP000402.1-201ENST00000446404 CEP126Q9P2H0 1117 aa12.06□□□□□ -0.48
AP000402.1-201ENST00000446404 TFIP11Q9UBB9 837 aaKnown RBP12.06□□□□□ -0.48
AP000402.1-201ENST00000446404 SKOR1P84550 965 aa12.05□□□□□ -0.48
AP000402.1-201ENST00000446404 TBC1D9Q6ZT07 1266 aa12.05□□□□□ -0.48
AP000402.1-201ENST00000446404 NFATC2IPQ8NCF5 419 aa12.05□□□□□ -0.48
AP000402.1-201ENST00000446404 ATP9BO43861 1147 aa12.04□□□□□ -0.48
AP000402.1-201ENST00000446404 PIK3CDO00329 1044 aa12.03□□□□□ -0.48
AP000402.1-201ENST00000446404 PPP1R15AO75807 674 aaPredicted RBP12.03□□□□□ -0.48
AP000402.1-201ENST00000446404 CD2BP2O95400 341 aaKnown RBP12.03□□□□□ -0.48
AP000402.1-201ENST00000446404 TRMT44Q8IYL2 757 aaKnown RBP12.03□□□□□ -0.48
AP000402.1-201ENST00000446404 SLC10A4Q96EP9 437 aa12.03□□□□□ -0.48
AP000402.1-201ENST00000446404 PLA2G2EQ9NZK7 142 aa12.03□□□□□ -0.48
AP000402.1-201ENST00000446404 MAFBQ9Y5Q3 323 aaPredicted RBP12.03□□□□□ -0.48
AP000402.1-201ENST00000446404 SLFNL1Q499Z3 407 aa12.02□□□□□ -0.49
AP000402.1-201ENST00000446404 LIAT1Q6ZQX7 453 aa12.02□□□□□ -0.49
AP000402.1-201ENST00000446404 EMID1Q96A84 441 aaPredicted RBP12.02□□□□□ -0.49
AP000402.1-201ENST00000446404 RFX1P22670 979 aa12.01□□□□□ -0.49
AP000402.1-201ENST00000446404 VARSP26640 1264 aaKnown RBP12.01□□□□□ -0.49
AP000402.1-201ENST00000446404 LMOD1P29536 600 aaPredicted RBP12.01□□□□□ -0.49
AP000402.1-201ENST00000446404 PHTF2Q8N3S3 785 aa12.01□□□□□ -0.49
AP000402.1-201ENST00000446404 FAM174AQ8TBP5 190 aa12.01□□□□□ -0.49
AP000402.1-201ENST00000446404 PBXIP1Q96AQ6 731 aa12.01□□□□□ -0.49
AP000402.1-201ENST00000446404 CDV3Q9UKY7 258 aaKnown RBP12□□□□□ -0.49
AP000402.1-201ENST00000446404 SKIP12755 728 aa11.99□□□□□ -0.49
AP000402.1-201ENST00000446404 RNF135Q8IUD6 432 aa11.99□□□□□ -0.49
AP000402.1-201ENST00000446404 A0A0G2JS52 829 aa11.98□□□□□ -0.49
AP000402.1-201ENST00000446404 SRPK2P78362 688 aaKnown RBP11.98□□□□□ -0.49
AP000402.1-201ENST00000446404 NBPF20Q3BBV1 942 aa11.98□□□□□ -0.49
AP000402.1-201ENST00000446404 EHBP1Q8NDI1 1231 aa11.98□□□□□ -0.49
AP000402.1-201ENST00000446404 CHIC2Q9UKJ5 165 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms