RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 PRIM1P49642 420 aaKnown RBP9.07□□□□□ -0.96
ECHDC1-208ENST00000436638 TRIM52Q96A61 297 aa9.07□□□□□ -0.96
ECHDC1-208ENST00000436638 NAIPQ13075 1403 aa9.06□□□□□ -0.96
ECHDC1-208ENST00000436638 SETD5Q9C0A6 1442 aa9.06□□□□□ -0.96
ECHDC1-208ENST00000436638 EIF2AK4Q9P2K8 1649 aaKnown RBP9.06□□□□□ -0.96
ECHDC1-208ENST00000436638 PPP1R3GB7ZBB8 358 aa9.06□□□□□ -0.96
ECHDC1-208ENST00000436638 TK2O00142 265 aa9.06□□□□□ -0.96
ECHDC1-208ENST00000436638 WASHC2CQ9Y4E1 1318 aa9.05□□□□□ -0.96
ECHDC1-208ENST00000436638 TPRNQ4KMQ1 711 aa9.05□□□□□ -0.96
ECHDC1-208ENST00000436638 STAC3Q96MF2 364 aa9.05□□□□□ -0.96
ECHDC1-208ENST00000436638 ZBED2Q9BTP6 218 aa9.05□□□□□ -0.96
ECHDC1-208ENST00000436638 PCGF6Q9BYE7 350 aa9.05□□□□□ -0.96
ECHDC1-208ENST00000436638 VPS9D1Q9Y2B5 631 aa9.05□□□□□ -0.96
ECHDC1-208ENST00000436638 GCC2Q8IWJ2 1684 aa9.04□□□□□ -0.96
ECHDC1-208ENST00000436638 BCORL1Q5H9F3 1711 aa9.04□□□□□ -0.96
ECHDC1-208ENST00000436638 NUP155O75694 1391 aa9.03□□□□□ -0.96
ECHDC1-208ENST00000436638 TESPA1A2RU30 521 aaPredicted RBP9.03□□□□□ -0.96
ECHDC1-208ENST00000436638 MMRN1Q13201 1228 aa9.03□□□□□ -0.96
ECHDC1-208ENST00000436638 SMYD5Q6GMV2 418 aa9.03□□□□□ -0.96
ECHDC1-208ENST00000436638 CNTLNQ9NXG0 1405 aa9.03□□□□□ -0.96
ECHDC1-208ENST00000436638 RAB3GAP2Q9H2M9 1393 aa9.02□□□□□ -0.97
ECHDC1-208ENST00000436638 PROX2Q3B8N5 592 aa9.02□□□□□ -0.97
ECHDC1-208ENST00000436638 SLC4A5Q9BY07 1137 aa9.02□□□□□ -0.97
ECHDC1-208ENST00000436638 SIGLEC1Q9BZZ2 1709 aa9.02□□□□□ -0.97
ECHDC1-208ENST00000436638 FAM135AQ9P2D6 1515 aa9.01□□□□□ -0.97
ECHDC1-208ENST00000436638 HRCP23327 699 aa9.01□□□□□ -0.97
ECHDC1-208ENST00000436638 BCL11AQ9H165 835 aa9.01□□□□□ -0.97
ECHDC1-208ENST00000436638 CDHR5Q9HBB8 845 aa9.01□□□□□ -0.97
ECHDC1-208ENST00000436638 GTF3C3Q9Y5Q9 886 aa9.01□□□□□ -0.97
ECHDC1-208ENST00000436638 RNF17Q9BXT8 1623 aaKnown RBP9.01□□□□□ -0.97
ECHDC1-208ENST00000436638 KDM5DQ9BY66 1539 aa9□□□□□ -0.97
ECHDC1-208ENST00000436638 FER1L4A9Z1Z3 1794 aa9□□□□□ -0.97
ECHDC1-208ENST00000436638 NUTM2FA1L443 756 aa9□□□□□ -0.97
ECHDC1-208ENST00000436638 ADAMTSL3P82987 1691 aa9□□□□□ -0.97
ECHDC1-208ENST00000436638 PRDM15P57071 1507 aaPredicted RBP9□□□□□ -0.97
ECHDC1-208ENST00000436638 ZMYM3Q14202 1370 aa8.99□□□□□ -0.97
ECHDC1-208ENST00000436638 UNC13BO14795 1591 aa8.99□□□□□ -0.97
ECHDC1-208ENST00000436638 DEPDC5O75140 1603 aa8.99□□□□□ -0.97
ECHDC1-208ENST00000436638 MADDQ8WXG6 1647 aa8.99□□□□□ -0.97
ECHDC1-208ENST00000436638 HRO43593 1189 aa8.99□□□□□ -0.97
ECHDC1-208ENST00000436638 RIMS1Q86UR5 1692 aaKnown RBP8.99□□□□□ -0.97
ECHDC1-208ENST00000436638 CLTCQ00610 1675 aaKnown RBP8.98□□□□□ -0.97
ECHDC1-208ENST00000436638 ZC3H13Q5T200 1668 aaKnown RBP8.98□□□□□ -0.97
ECHDC1-208ENST00000436638 CEBPAP49715 358 aaPredicted RBP8.98□□□□□ -0.97
ECHDC1-208ENST00000436638 RBM26Q5T8P6 1007 aaKnown RBP8.98□□□□□ -0.97
ECHDC1-208ENST00000436638 CERKQ8TCT0 537 aa8.98□□□□□ -0.97
ECHDC1-208ENST00000436638 KIAA1468Q9P260 1216 aa8.98□□□□□ -0.97
ECHDC1-208ENST00000436638 ABCC3O15438 1527 aa8.98□□□□□ -0.97
ECHDC1-208ENST00000436638 MROH1Q8NDA8 1641 aa8.98□□□□□ -0.97
ECHDC1-208ENST00000436638 NPM2Q86SE8 214 aaKnown RBP8.97□□□□□ -0.97
ECHDC1-208ENST00000436638 RNF166Q96A37 237 aaPredicted RBP8.97□□□□□ -0.97
ECHDC1-208ENST00000436638 CDCA7LQ96GN5 454 aa8.97□□□□□ -0.97
ECHDC1-208ENST00000436638 MPHOSPH9Q99550 1183 aa8.97□□□□□ -0.97
ECHDC1-208ENST00000436638 CEP152O94986 1710 aa8.97□□□□□ -0.97
ECHDC1-208ENST00000436638 PTPRMP28827 1452 aa8.96□□□□□ -0.97
ECHDC1-208ENST00000436638 LMTK2Q8IWU2 1503 aa8.96□□□□□ -0.97
ECHDC1-208ENST00000436638 TRIM6-TRIM34B2RNG4 842 aa8.96□□□□□ -0.98
ECHDC1-208ENST00000436638 PRSS12P56730 875 aa8.96□□□□□ -0.98
ECHDC1-208ENST00000436638 MRPL50Q8N5N7 158 aaKnown RBP8.96□□□□□ -0.98
ECHDC1-208ENST00000436638 NBPF3Q9H094 633 aa8.96□□□□□ -0.98
ECHDC1-208ENST00000436638 RABGEF1Q9UJ41 708 aa8.96□□□□□ -0.98
ECHDC1-208ENST00000436638 MROH2AA6NES4 1674 aa8.96□□□□□ -0.98
ECHDC1-208ENST00000436638 VWDEQ8N2E2 1590 aa8.95□□□□□ -0.98
ECHDC1-208ENST00000436638 IQGAP3Q86VI3 1631 aa8.95□□□□□ -0.98
ECHDC1-208ENST00000436638 GOLGA8CPA6NN73 597 aa8.95□□□□□ -0.98
ECHDC1-208ENST00000436638 BHMG1C9JSJ3 638 aaPredicted RBP8.95□□□□□ -0.98
ECHDC1-208ENST00000436638 PACS2Q86VP3 889 aa8.95□□□□□ -0.98
ECHDC1-208ENST00000436638 NPDC1Q9NQX5 325 aaPredicted RBP8.95□□□□□ -0.98
ECHDC1-208ENST00000436638 ARHGAP31Q2M1Z3 1444 aa8.95□□□□□ -0.98
ECHDC1-208ENST00000436638 CAMSAP1Q5T5Y3 1602 aa8.94□□□□□ -0.98
ECHDC1-208ENST00000436638 TET3O43151 1660 aa8.94□□□□□ -0.98
ECHDC1-208ENST00000436638 ONECUT3O60422 494 aaPredicted RBP8.94□□□□□ -0.98
ECHDC1-208ENST00000436638 FBXO31Q5XUX0 539 aaPredicted RBP8.94□□□□□ -0.98
ECHDC1-208ENST00000436638 TSKSQ9UJT2 592 aa8.94□□□□□ -0.98
ECHDC1-208ENST00000436638 PZPP20742 1482 aa8.94□□□□□ -0.98
ECHDC1-208ENST00000436638 TNRQ92752 1358 aa8.93□□□□□ -0.98
ECHDC1-208ENST00000436638 NPATQ14207 1427 aa8.93□□□□□ -0.98
ECHDC1-208ENST00000436638 RPRD2Q5VT52 1461 aaKnown RBP8.93□□□□□ -0.98
ECHDC1-208ENST00000436638 EFCAB6Q5THR3 1501 aa8.93□□□□□ -0.98
ECHDC1-208ENST00000436638 C3P01024 1663 aa8.93□□□□□ -0.98
ECHDC1-208ENST00000436638 PTGDRQ13258 359 aa8.92□□□□□ -0.98
ECHDC1-208ENST00000436638 KCTD12Q96CX2 325 aaKnown RBP8.92□□□□□ -0.98
ECHDC1-208ENST00000436638 SEPT9Q9UHD8 586 aaPredicted RBP8.92□□□□□ -0.98
ECHDC1-208ENST00000436638 ERVK-7P63135 1459 aa8.91□□□□□ -0.98
ECHDC1-208ENST00000436638 FCHSD2O94868 740 aa8.91□□□□□ -0.98
ECHDC1-208ENST00000436638 PADI6Q6TGC4 694 aa8.91□□□□□ -0.98
ECHDC1-208ENST00000436638 SLC52A1Q9NWF4 448 aa8.9□□□□□ -0.98
ECHDC1-208ENST00000436638 FAM198AQ9UFP1 575 aa8.9□□□□□ -0.98
ECHDC1-208ENST00000436638 SPATA31D1Q6ZQQ2 1576 aa8.9□□□□□ -0.99
ECHDC1-208ENST00000436638 UHRF1BP1Q6BDS2 1440 aa8.89□□□□□ -0.99
ECHDC1-208ENST00000436638 E9PCH4 1651 aa8.89□□□□□ -0.99
ECHDC1-208ENST00000436638 SMAPO00193 183 aa8.89□□□□□ -0.99
ECHDC1-208ENST00000436638 PNMA3Q9UL41 463 aa8.89□□□□□ -0.99
ECHDC1-208ENST00000436638 CFAP65Q6ZU64 1925 aaKnown RBP8.89□□□□□ -0.99
ECHDC1-208ENST00000436638 NOS1P29475 1434 aa8.88□□□□□ -0.99
ECHDC1-208ENST00000436638 PREX1Q8TCU6 1659 aa8.88□□□□□ -0.99
ECHDC1-208ENST00000436638 LAPTM4BQ86VI4 370 aa8.88□□□□□ -0.99
ECHDC1-208ENST00000436638 GPIHBP1Q8IV16 184 aa8.88□□□□□ -0.99
ECHDC1-208ENST00000436638 TATDN2Q93075 761 aa8.88□□□□□ -0.99
ECHDC1-208ENST00000436638 WNT2BQ93097 391 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms