RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 ZFYVE16Q7Z3T8 1539 aa14.19□□□□□ -0.14
PTCH1-208ENST00000430669 PRKAR2BP31323 418 aa14.19□□□□□ -0.14
PTCH1-208ENST00000430669 FKBP5Q13451 457 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-208ENST00000430669 INTS3Q68E01 1043 aaKnown RBP14.19□□□□□ -0.14
PTCH1-208ENST00000430669 ZNF330Q9Y3S2 320 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-208ENST00000430669 TNRQ92752 1358 aa14.19□□□□□ -0.14
PTCH1-208ENST00000430669 ATP10AO60312 1499 aa14.18□□□□□ -0.14
PTCH1-208ENST00000430669 WWC1Q8IX03 1113 aa14.18□□□□□ -0.14
PTCH1-208ENST00000430669 DISP3Q9P2K9 1392 aa14.18□□□□□ -0.14
PTCH1-208ENST00000430669 CCDC9Q9Y3X0 531 aaKnown RBP14.18□□□□□ -0.14
PTCH1-208ENST00000430669 TRPM1Q7Z4N2 1603 aa14.18□□□□□ -0.14
PTCH1-208ENST00000430669 SKOR2Q2VWA4 1001 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-208ENST00000430669 ESCO1Q5FWF5 840 aa14.17□□□□□ -0.14
PTCH1-208ENST00000430669 ERC2O15083 957 aa14.17□□□□□ -0.14
PTCH1-208ENST00000430669 NUDT16Q96DE0 195 aaKnown RBP14.17□□□□□ -0.14
PTCH1-208ENST00000430669 KCNH5Q8NCM2 988 aa14.17□□□□□ -0.14
PTCH1-208ENST00000430669 LAMC1P11047 1609 aa14.17□□□□□ -0.14
PTCH1-208ENST00000430669 KDM6BO15054 1643 aa14.17□□□□□ -0.14
PTCH1-208ENST00000430669 GCC1Q96CN9 775 aa14.17□□□□□ -0.14
PTCH1-208ENST00000430669 GNAI3P08754 354 aa14.17□□□□□ -0.14
PTCH1-208ENST00000430669 DNTTIP2Q5QJE6 756 aaKnown RBP14.17□□□□□ -0.14
PTCH1-208ENST00000430669 CHAF1AQ13111 956 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-208ENST00000430669 ADGRF5Q8IZF2 1346 aa14.16□□□□□ -0.14
PTCH1-208ENST00000430669 ELL2O00472 640 aaPredicted RBP14.16□□□□□ -0.14
PTCH1-208ENST00000430669 MSNP26038 577 aaKnown RBP14.16□□□□□ -0.14
PTCH1-208ENST00000430669 HSP90B1P14625 803 aaKnown RBP14.16□□□□□ -0.14
PTCH1-208ENST00000430669 CCT4P50991 539 aaKnown RBP14.16□□□□□ -0.14
PTCH1-208ENST00000430669 SPRYD3Q8NCJ5 442 aa14.16□□□□□ -0.14
PTCH1-208ENST00000430669 DIAPH3Q9NSV4 1193 aa14.15□□□□□ -0.14
PTCH1-208ENST00000430669 IDI1Q13907 227 aa14.15□□□□□ -0.14
PTCH1-208ENST00000430669 TTC21BQ7Z4L5 1316 aa14.15□□□□□ -0.14
PTCH1-208ENST00000430669 ZFYVE9O95405 1425 aa14.15□□□□□ -0.14
PTCH1-208ENST00000430669 SLKQ9H2G2 1235 aaPredicted RBP14.15□□□□□ -0.14
PTCH1-208ENST00000430669 ZC3H13Q5T200 1668 aaKnown RBP14.14□□□□□ -0.15
PTCH1-208ENST00000430669 RILPL2Q969X0 211 aa14.14□□□□□ -0.15
PTCH1-208ENST00000430669 RNF20Q5VTR2 975 aa14.14□□□□□ -0.15
PTCH1-208ENST00000430669 RIMS2Q9UQ26 1411 aa14.14□□□□□ -0.15
PTCH1-208ENST00000430669 EIF2S2P20042 333 aaKnown RBP14.14□□□□□ -0.15
PTCH1-208ENST00000430669 LRPPRCP42704 1394 aaKnown RBP14.14□□□□□ -0.15
PTCH1-208ENST00000430669 QRICH2Q9H0J4 1663 aa14.13□□□□□ -0.15
PTCH1-208ENST00000430669 NFE2L2Q16236 605 aa14.13□□□□□ -0.15
PTCH1-208ENST00000430669 IFIT2P09913 472 aaKnown RBP14.13□□□□□ -0.15
PTCH1-208ENST00000430669 TWISTNBQ3B726 338 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-208ENST00000430669 PROSER2Q86WR7 435 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-208ENST00000430669 PARD3Q8TEW0 1356 aa14.13□□□□□ -0.15
PTCH1-208ENST00000430669 G3BP1Q13283 466 aaKnown RBP eCLIP14.13□□□□□ -0.15
PTCH1-208ENST00000430669 WASLO00401 505 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-208ENST00000430669 PANK1Q8TE04 598 aa14.13□□□□□ -0.15
PTCH1-208ENST00000430669 SLFN5Q08AF3 891 aa14.13□□□□□ -0.15
PTCH1-208ENST00000430669 UBTFL1P0CB47 393 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-208ENST00000430669 C11orf95C9JLR9 678 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-208ENST00000430669 TPM4P67936 248 aa14.12□□□□□ -0.15
PTCH1-208ENST00000430669 ERC1Q8IUD2 1116 aa14.12□□□□□ -0.15
PTCH1-208ENST00000430669 IFT57Q9NWB7 429 aa14.12□□□□□ -0.15
PTCH1-208ENST00000430669 ZKSCAN1P17029 563 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-208ENST00000430669 DEKP35659 375 aaKnown RBP14.12□□□□□ -0.15
PTCH1-208ENST00000430669 PIK3C2GO75747 1445 aa14.12□□□□□ -0.15
PTCH1-208ENST00000430669 ALDH1L2Q3SY69 923 aa14.12□□□□□ -0.15
PTCH1-208ENST00000430669 ABCA9Q8IUA7 1624 aa14.12□□□□□ -0.15
PTCH1-208ENST00000430669 ATF7IPQ6VMQ6 1270 aa14.12□□□□□ -0.15
PTCH1-208ENST00000430669 CDCA7LQ96GN5 454 aa14.11□□□□□ -0.15
PTCH1-208ENST00000430669 HIP1O00291 1037 aa14.11□□□□□ -0.15
PTCH1-208ENST00000430669 KIAA1210Q9ULL0 1709 aa14.11□□□□□ -0.15
PTCH1-208ENST00000430669 TMPOP42166 694 aaKnown RBP14.11□□□□□ -0.15
PTCH1-208ENST00000430669 MVPQ14764 893 aaKnown RBP14.11□□□□□ -0.15
PTCH1-208ENST00000430669 GNAI2P04899 355 aa14.1□□□□□ -0.15
PTCH1-208ENST00000430669 SULT6B1Q6IMI4 303 aa14.1□□□□□ -0.15
PTCH1-208ENST00000430669 SPG7Q9UQ90 795 aa14.1□□□□□ -0.15
PTCH1-208ENST00000430669 NOB1Q9ULX3 412 aaKnown RBP14.1□□□□□ -0.15
PTCH1-208ENST00000430669 GOLGA6L3A6NEY3 463 aa14.1□□□□□ -0.15
PTCH1-208ENST00000430669 TATP17735 454 aaPredicted RBP14.1□□□□□ -0.15
PTCH1-208ENST00000430669 MAP3K4Q9Y6R4 1608 aa14.1□□□□□ -0.15
PTCH1-208ENST00000430669 GTF2E1P29083 439 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-208ENST00000430669 MAGI2Q86UL8 1455 aa14.09□□□□□ -0.15
PTCH1-208ENST00000430669 IL16Q14005 1332 aa14.09□□□□□ -0.15
PTCH1-208ENST00000430669 RIC3Q7Z5B4 369 aa14.09□□□□□ -0.15
PTCH1-208ENST00000430669 CDC45O75419 566 aa14.09□□□□□ -0.15
PTCH1-208ENST00000430669 E9PCH4 1651 aa14.09□□□□□ -0.15
PTCH1-208ENST00000430669 PRDM15P57071 1507 aaPredicted RBP14.08□□□□□ -0.15
PTCH1-208ENST00000430669 NLRP2Q9NX02 1062 aa14.08□□□□□ -0.16
PTCH1-208ENST00000430669 NPC1L1Q9UHC9 1359 aa14.08□□□□□ -0.16
PTCH1-208ENST00000430669 EXOSC9Q06265 439 aaKnown RBP14.08□□□□□ -0.16
PTCH1-208ENST00000430669 CNTROBQ8N137 903 aa14.08□□□□□ -0.16
PTCH1-208ENST00000430669 INSRP06213 1382 aa14.08□□□□□ -0.16
PTCH1-208ENST00000430669 SRCIN1Q9C0H9 1055 aa14.08□□□□□ -0.16
PTCH1-208ENST00000430669 TTC21AQ8NDW8 1320 aa14.08□□□□□ -0.16
PTCH1-208ENST00000430669 ZMYM4Q5VZL5 1548 aa14.07□□□□□ -0.16
PTCH1-208ENST00000430669 HMGB2P26583 209 aaKnown RBP14.07□□□□□ -0.16
PTCH1-208ENST00000430669 MYOM2P54296 1465 aa14.07□□□□□ -0.16
PTCH1-208ENST00000430669 GNAT3A8MTJ3 354 aa14.07□□□□□ -0.16
PTCH1-208ENST00000430669 DRC7Q8IY82 874 aa14.07□□□□□ -0.16
PTCH1-208ENST00000430669 MBD5Q9P267 1494 aa14.07□□□□□ -0.16
PTCH1-208ENST00000430669 PLCB2Q00722 1185 aa14.07□□□□□ -0.16
PTCH1-208ENST00000430669 CAMSAP1Q5T5Y3 1602 aa14.07□□□□□ -0.16
PTCH1-208ENST00000430669 MCM2P49736 904 aa14.07□□□□□ -0.16
PTCH1-208ENST00000430669 TPRNQ4KMQ1 711 aa14.07□□□□□ -0.16
PTCH1-208ENST00000430669 KIF6Q6ZMV9 814 aa14.06□□□□□ -0.16
PTCH1-208ENST00000430669 C22orf23Q9BZE7 217 aa14.06□□□□□ -0.16
PTCH1-208ENST00000430669 PPIP5K1Q6PFW1 1433 aa14.06□□□□□ -0.16
PTCH1-208ENST00000430669 AMOTQ4VCS5 1084 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms