RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 U2SURPO15042 1029 aaKnown RBP18.19■□□□□ 0.5
RBM39-212ENST00000429968 CEBPAP49715 358 aaPredicted RBP18.19■□□□□ 0.5
RBM39-212ENST00000429968 CPS1P31327 1500 aa18.18■□□□□ 0.5
RBM39-212ENST00000429968 TNNQ9UQP3 1299 aa18.18■□□□□ 0.5
RBM39-212ENST00000429968 MON2Q7Z3U7 1717 aa18.18■□□□□ 0.5
RBM39-212ENST00000429968 TMEM2Q9UHN6 1383 aa18.18■□□□□ 0.5
RBM39-212ENST00000429968 ZRANB1Q9UGI0 708 aa18.17■□□□□ 0.5
RBM39-212ENST00000429968 PPIP5K1Q6PFW1 1433 aa18.17■□□□□ 0.5
RBM39-212ENST00000429968 WASLO00401 505 aaPredicted RBP18.17■□□□□ 0.5
RBM39-212ENST00000429968 PODXL2Q9NZ53 605 aa18.17■□□□□ 0.5
RBM39-212ENST00000429968 ADAMTS13Q76LX8 1427 aa18.17■□□□□ 0.5
RBM39-212ENST00000429968 AKAP12Q02952 1782 aa18.17■□□□□ 0.5
RBM39-212ENST00000429968 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.16■□□□□ 0.5
RBM39-212ENST00000429968 C3P01024 1663 aa18.16■□□□□ 0.5
RBM39-212ENST00000429968 TCERG1O14776 1098 aaKnown RBP18.16■□□□□ 0.5
RBM39-212ENST00000429968 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.16■□□□□ 0.5
RBM39-212ENST00000429968 CPSF1Q10570 1443 aaKnown RBP18.16■□□□□ 0.5
RBM39-212ENST00000429968 PNPLA6Q8IY17 1366 aa18.16■□□□□ 0.5
RBM39-212ENST00000429968 TECPR2O15040 1411 aa18.16■□□□□ 0.5
RBM39-212ENST00000429968 CCDC27Q2M243 656 aa18.16■□□□□ 0.5
RBM39-212ENST00000429968 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.16■□□□□ 0.5
RBM39-212ENST00000429968 PANK1Q8TE04 598 aa18.16■□□□□ 0.5
RBM39-212ENST00000429968 LTKP29376 864 aa18.15■□□□□ 0.5
RBM39-212ENST00000429968 WDR63Q8IWG1 891 aa18.15■□□□□ 0.5
RBM39-212ENST00000429968 BCL2L13Q9BXK5 485 aa18.15■□□□□ 0.5
RBM39-212ENST00000429968 LRRC7Q96NW7 1537 aa18.15■□□□□ 0.5
RBM39-212ENST00000429968 ROBO2Q9HCK4 1378 aa18.15■□□□□ 0.5
RBM39-212ENST00000429968 RARSP54136 660 aaKnown RBP18.14■□□□□ 0.5
RBM39-212ENST00000429968 CDC42BPGQ6DT37 1551 aa18.14■□□□□ 0.49
RBM39-212ENST00000429968 PRR36Q9H6K5 1346 aa18.14■□□□□ 0.49
RBM39-212ENST00000429968 ITSN1Q15811 1721 aa18.14■□□□□ 0.49
RBM39-212ENST00000429968 PDE4AP27815 886 aa18.14■□□□□ 0.49
RBM39-212ENST00000429968 TRIM35Q9UPQ4 493 aa18.14■□□□□ 0.49
RBM39-212ENST00000429968 NME9Q86XW9 330 aa18.13■□□□□ 0.49
RBM39-212ENST00000429968 POLKQ9UBT6 870 aa18.13■□□□□ 0.49
RBM39-212ENST00000429968 TSR2Q969E8 191 aaKnown RBP18.13■□□□□ 0.49
RBM39-212ENST00000429968 PAK3O75914 559 aaPredicted RBP18.12■□□□□ 0.49
RBM39-212ENST00000429968 TMPOP42166 694 aaKnown RBP18.12■□□□□ 0.49
RBM39-212ENST00000429968 NUDT16Q96DE0 195 aaKnown RBP18.12■□□□□ 0.49
RBM39-212ENST00000429968 FAM135BQ49AJ0 1406 aa18.12■□□□□ 0.49
RBM39-212ENST00000429968 BACH2Q9BYV9 841 aa18.11■□□□□ 0.49
RBM39-212ENST00000429968 PPM1GO15355 546 aaPredicted RBP18.11■□□□□ 0.49
RBM39-212ENST00000429968 RLBP1P12271 317 aa18.11■□□□□ 0.49
RBM39-212ENST00000429968 FRAT1Q92837 279 aaPredicted RBP18.11■□□□□ 0.49
RBM39-212ENST00000429968 COG6Q9Y2V7 657 aa18.11■□□□□ 0.49
RBM39-212ENST00000429968 EDC4Q6P2E9 1401 aaKnown RBP18.1■□□□□ 0.49
RBM39-212ENST00000429968 DIAPH1O60610 1272 aaKnown RBP18.1■□□□□ 0.49
RBM39-212ENST00000429968 CENPQQ7L2Z9 268 aaPredicted RBP18.1■□□□□ 0.49
RBM39-212ENST00000429968 EMILIN1Q9Y6C2 1016 aa18.1■□□□□ 0.49
RBM39-212ENST00000429968 FER1L4A9Z1Z3 1794 aa18.1■□□□□ 0.49
RBM39-212ENST00000429968 PTPRUQ92729 1446 aa18.09■□□□□ 0.49
RBM39-212ENST00000429968 IGHDP01880 384 aa18.09■□□□□ 0.49
RBM39-212ENST00000429968 TOPAZ1Q8N9V7 1692 aa18.09■□□□□ 0.49
RBM39-212ENST00000429968 MS4A1P11836 297 aa18.08■□□□□ 0.49
RBM39-212ENST00000429968 NRKQ7Z2Y5 1582 aa18.07■□□□□ 0.48
RBM39-212ENST00000429968 PDE3AQ14432 1141 aa18.07■□□□□ 0.48
RBM39-212ENST00000429968 SLC26A8Q96RN1 970 aa18.07■□□□□ 0.48
RBM39-212ENST00000429968 DLG5Q8TDM6 1919 aa18.07■□□□□ 0.48
RBM39-212ENST00000429968 NUTM2FA1L443 756 aa18.06■□□□□ 0.48
RBM39-212ENST00000429968 CANXP27824 592 aaKnown RBP18.06■□□□□ 0.48
RBM39-212ENST00000429968 NPM2Q86SE8 214 aaKnown RBP18.06■□□□□ 0.48
RBM39-212ENST00000429968 RGPD8O14715 1765 aaPredicted RBP18.05■□□□□ 0.48
RBM39-212ENST00000429968 RSPH6AQ9H0K4 717 aa18.05■□□□□ 0.48
RBM39-212ENST00000429968 PLEKHG1Q9ULL1 1385 aa18.05■□□□□ 0.48
RBM39-212ENST00000429968 MAPK8IP3Q9UPT6 1336 aa18.05■□□□□ 0.48
RBM39-212ENST00000429968 CCDC61Q9Y6R9 512 aa18.05■□□□□ 0.48
RBM39-212ENST00000429968 RIPK4P57078 832 aa18.05■□□□□ 0.48
RBM39-212ENST00000429968 SIRT1Q96EB6 747 aa18.05■□□□□ 0.48
RBM39-212ENST00000429968 HMOX1P09601 288 aa18.04■□□□□ 0.48
RBM39-212ENST00000429968 EXOSC9Q06265 439 aaKnown RBP18.04■□□□□ 0.48
RBM39-212ENST00000429968 RRS1Q15050 365 aaKnown RBP18.04■□□□□ 0.48
RBM39-212ENST00000429968 MYH16Q9H6N6 1097 aa18.04■□□□□ 0.48
RBM39-212ENST00000429968 PRKAR2BP31323 418 aa18.04■□□□□ 0.48
RBM39-212ENST00000429968 CLUAP1Q96AJ1 413 aa18.04■□□□□ 0.48
RBM39-212ENST00000429968 PHACTR3Q96KR7 559 aa18.04■□□□□ 0.48
RBM39-212ENST00000429968 HDGFP51858 240 aaKnown RBP18.03■□□□□ 0.48
RBM39-212ENST00000429968 ANP32AP39687 249 aaKnown RBP18.02■□□□□ 0.48
RBM39-212ENST00000429968 IPO9Q96P70 1041 aaKnown RBP18.02■□□□□ 0.48
RBM39-212ENST00000429968 NOP58Q9Y2X3 529 aaKnown RBP18.02■□□□□ 0.48
RBM39-212ENST00000429968 CDK12Q9NYV4 1490 aaPredicted RBP18.02■□□□□ 0.47
RBM39-212ENST00000429968 SLIT1O75093 1534 aa18.01■□□□□ 0.47
RBM39-212ENST00000429968 IL13P35225 146 aa18.01■□□□□ 0.47
RBM39-212ENST00000429968 RGS3P49796 1198 aa18.01■□□□□ 0.47
RBM39-212ENST00000429968 ARHGAP23Q9P227 1491 aa18.01■□□□□ 0.47
RBM39-212ENST00000429968 THUMPD2Q9BTF0 503 aaKnown RBP18■□□□□ 0.47
RBM39-212ENST00000429968 PCDHB15Q9Y5E8 787 aa18■□□□□ 0.47
RBM39-212ENST00000429968 FCHSD2O94868 740 aa17.99■□□□□ 0.47
RBM39-212ENST00000429968 PEAK1Q9H792 1746 aa17.99■□□□□ 0.47
RBM39-212ENST00000429968 VIRMAQ69YN4 1812 aaKnown RBP17.99■□□□□ 0.47
RBM39-212ENST00000429968 C8orf34Q49A92 452 aa17.98■□□□□ 0.47
RBM39-212ENST00000429968 SSH1Q8WYL5 1049 aa17.98■□□□□ 0.47
RBM39-212ENST00000429968 AATKQ6ZMQ8 1374 aa17.98■□□□□ 0.47
RBM39-212ENST00000429968 ACEP12821 1306 aa17.98■□□□□ 0.47
RBM39-212ENST00000429968 NALCNQ8IZF0 1738 aa17.98■□□□□ 0.47
RBM39-212ENST00000429968 COG3Q96JB2 828 aa17.97■□□□□ 0.47
RBM39-212ENST00000429968 IL16Q14005 1332 aa17.96■□□□□ 0.46
RBM39-212ENST00000429968 SMC4Q9NTJ3 1288 aa17.95■□□□□ 0.46
RBM39-212ENST00000429968 AMOTL2Q9Y2J4 779 aa17.95■□□□□ 0.46
RBM39-212ENST00000429968 TTC21BQ7Z4L5 1316 aa17.95■□□□□ 0.46
RBM39-212ENST00000429968 OVOS2A0A0J9YW53 1432 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms