RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 MCCP23508 829 aa16.9■□□□□ 0.3
SGMS1-203ENST00000429490 OS9Q13438 667 aaPredicted RBP16.9■□□□□ 0.3
SGMS1-203ENST00000429490 CT47B1P0C2W7 299 aaPredicted RBP16.9■□□□□ 0.3
SGMS1-203ENST00000429490 NEK4P51957 841 aa16.9■□□□□ 0.3
SGMS1-203ENST00000429490 HDAC1Q13547 482 aaPredicted RBP16.9■□□□□ 0.3
SGMS1-203ENST00000429490 CDK19Q9BWU1 502 aa16.9■□□□□ 0.3
SGMS1-203ENST00000429490 INSRP06213 1382 aa16.9■□□□□ 0.3
SGMS1-203ENST00000429490 INTS3Q68E01 1043 aaKnown RBP16.9■□□□□ 0.3
SGMS1-203ENST00000429490 FAM83GA6ND36 823 aa16.89■□□□□ 0.29
SGMS1-203ENST00000429490 NUCB2P80303 420 aa16.89■□□□□ 0.29
SGMS1-203ENST00000429490 TSPYL6Q8N831 410 aa16.89■□□□□ 0.29
SGMS1-203ENST00000429490 COG3Q96JB2 828 aa16.89■□□□□ 0.29
SGMS1-203ENST00000429490 C14orf93Q9H972 538 aaKnown RBP16.89■□□□□ 0.29
SGMS1-203ENST00000429490 CLCN1P35523 988 aa16.88■□□□□ 0.29
SGMS1-203ENST00000429490 NUCB1Q02818 461 aa16.88■□□□□ 0.29
SGMS1-203ENST00000429490 GAS2L2Q8NHY3 880 aa16.88■□□□□ 0.29
SGMS1-203ENST00000429490 EMILIN1Q9Y6C2 1016 aa16.88■□□□□ 0.29
SGMS1-203ENST00000429490 POLR1AO95602 1720 aaPredicted RBP16.88■□□□□ 0.29
SGMS1-203ENST00000429490 DUOX2Q9NRD8 1548 aa16.88■□□□□ 0.29
SGMS1-203ENST00000429490 HMMRO75330 724 aa16.88■□□□□ 0.29
SGMS1-203ENST00000429490 C16orf71Q8IYS4 520 aaPredicted RBP16.88■□□□□ 0.29
SGMS1-203ENST00000429490 ZBTB40Q9NUA8 1239 aa16.88■□□□□ 0.29
SGMS1-203ENST00000429490 LMOD3Q0VAK6 560 aa16.88■□□□□ 0.29
SGMS1-203ENST00000429490 SMC5Q8IY18 1101 aa16.88■□□□□ 0.29
SGMS1-203ENST00000429490 WAPLQ7Z5K2 1190 aa16.87■□□□□ 0.29
SGMS1-203ENST00000429490 EIF2AK4Q9P2K8 1649 aaKnown RBP16.87■□□□□ 0.29
SGMS1-203ENST00000429490 REC8O95072 547 aa16.87■□□□□ 0.29
SGMS1-203ENST00000429490 KCNJ4P48050 445 aa16.87■□□□□ 0.29
SGMS1-203ENST00000429490 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.87■□□□□ 0.29
SGMS1-203ENST00000429490 LTV1Q96GA3 475 aaPredicted RBP16.87■□□□□ 0.29
SGMS1-203ENST00000429490 MIS18AQ9NYP9 233 aa16.87■□□□□ 0.29
SGMS1-203ENST00000429490 FYB1O15117 783 aa16.87■□□□□ 0.29
SGMS1-203ENST00000429490 TAOK2Q9UL54 1235 aa16.87■□□□□ 0.29
SGMS1-203ENST00000429490 CIZ1Q9ULV3 898 aaPredicted RBP16.87■□□□□ 0.29
SGMS1-203ENST00000429490 CFAP65Q6ZU64 1925 aaKnown RBP16.85■□□□□ 0.29
SGMS1-203ENST00000429490 RABEP1Q15276 862 aa16.85■□□□□ 0.29
SGMS1-203ENST00000429490 BMP2KLQ5H9B9 411 aa16.85■□□□□ 0.29
SGMS1-203ENST00000429490 STK31Q9BXU1 1019 aa16.85■□□□□ 0.29
SGMS1-203ENST00000429490 RBM27Q9P2N5 1060 aaKnown RBP16.85■□□□□ 0.29
SGMS1-203ENST00000429490 CFAP44Q96MT7 982 aa16.85■□□□□ 0.29
SGMS1-203ENST00000429490 CHMP3Q9Y3E7 222 aa16.85■□□□□ 0.29
SGMS1-203ENST00000429490 CCDC173Q0VFZ6 552 aa16.85■□□□□ 0.29
SGMS1-203ENST00000429490 TSHZ3Q63HK5 1081 aa16.85■□□□□ 0.29
SGMS1-203ENST00000429490 TRIM35Q9UPQ4 493 aa16.85■□□□□ 0.29
SGMS1-203ENST00000429490 NPC1L1Q9UHC9 1359 aa16.85■□□□□ 0.29
SGMS1-203ENST00000429490 BAG4O95429 457 aaKnown RBP16.84■□□□□ 0.29
SGMS1-203ENST00000429490 IDI1Q13907 227 aa16.84■□□□□ 0.29
SGMS1-203ENST00000429490 CCDC27Q2M243 656 aa16.84■□□□□ 0.29
SGMS1-203ENST00000429490 PLCH2O75038 1416 aa16.84■□□□□ 0.29
SGMS1-203ENST00000429490 PRDM15P57071 1507 aaPredicted RBP16.84■□□□□ 0.29
SGMS1-203ENST00000429490 FCHSD2O94868 740 aa16.84■□□□□ 0.29
SGMS1-203ENST00000429490 GAS2L3Q86XJ1 694 aa16.84■□□□□ 0.29
SGMS1-203ENST00000429490 SAMD9LQ8IVG5 1584 aa16.84■□□□□ 0.29
SGMS1-203ENST00000429490 HAP1P54257 671 aaPredicted RBP16.84■□□□□ 0.29
SGMS1-203ENST00000429490 PHACTR3Q96KR7 559 aa16.84■□□□□ 0.29
SGMS1-203ENST00000429490 TRPM1Q7Z4N2 1603 aa16.83■□□□□ 0.29
SGMS1-203ENST00000429490 XPCQ01831 940 aaPredicted RBP16.83■□□□□ 0.29
SGMS1-203ENST00000429490 SULT6B1Q6IMI4 303 aa16.83■□□□□ 0.29
SGMS1-203ENST00000429490 ATAD2Q6PL18 1390 aa16.83■□□□□ 0.29
SGMS1-203ENST00000429490 SYCE3A1L190 88 aa16.83■□□□□ 0.28
SGMS1-203ENST00000429490 NFE2L2Q16236 605 aa16.83■□□□□ 0.28
SGMS1-203ENST00000429490 KIAA2012Q0VF49 1180 aa16.83■□□□□ 0.28
SGMS1-203ENST00000429490 PKNOX2Q96KN3 472 aa16.83■□□□□ 0.28
SGMS1-203ENST00000429490 CDC42BPAQ5VT25 1732 aa16.83■□□□□ 0.28
SGMS1-203ENST00000429490 CD2BP2O95400 341 aaKnown RBP16.82■□□□□ 0.28
SGMS1-203ENST00000429490 SLC4A2P04920 1241 aa16.82■□□□□ 0.28
SGMS1-203ENST00000429490 KRT24Q2M2I5 525 aa16.82■□□□□ 0.28
SGMS1-203ENST00000429490 FKBP5Q13451 457 aaPredicted RBP16.82■□□□□ 0.28
SGMS1-203ENST00000429490 MCM10Q7L590 875 aa16.82■□□□□ 0.28
SGMS1-203ENST00000429490 EXOC6BQ9Y2D4 811 aa16.82■□□□□ 0.28
SGMS1-203ENST00000429490 NME9Q86XW9 330 aa16.81■□□□□ 0.28
SGMS1-203ENST00000429490 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.81■□□□□ 0.28
SGMS1-203ENST00000429490 ZSCAN30Q86W11 494 aa16.81■□□□□ 0.28
SGMS1-203ENST00000429490 UPF3BQ9BZI7 483 aaKnown RBP16.81■□□□□ 0.28
SGMS1-203ENST00000429490 MBIPQ9NS73 344 aa16.81■□□□□ 0.28
SGMS1-203ENST00000429490 ZNF428Q96B54 188 aa16.81■□□□□ 0.28
SGMS1-203ENST00000429490 BCL11BQ9C0K0 894 aaPredicted RBP16.81■□□□□ 0.28
SGMS1-203ENST00000429490 CHAMP1Q96JM3 812 aa16.8■□□□□ 0.28
SGMS1-203ENST00000429490 GDPD2Q9HCC8 539 aa16.8■□□□□ 0.28
SGMS1-203ENST00000429490 TXNDC2Q86VQ3 553 aa16.8■□□□□ 0.28
SGMS1-203ENST00000429490 C8orf58Q8NAV2 365 aa16.8■□□□□ 0.28
SGMS1-203ENST00000429490 SYAP1Q96A49 352 aaPredicted RBP16.8■□□□□ 0.28
SGMS1-203ENST00000429490 ZRANB1Q9UGI0 708 aa16.8■□□□□ 0.28
SGMS1-203ENST00000429490 ISY1Q9ULR0 285 aaKnown RBP16.8■□□□□ 0.28
SGMS1-203ENST00000429490 PTPRTO14522 1441 aa16.8■□□□□ 0.28
SGMS1-203ENST00000429490 F6X3S4 739 aa16.79■□□□□ 0.28
SGMS1-203ENST00000429490 RAB3GAP1Q15042 981 aa16.79■□□□□ 0.28
SGMS1-203ENST00000429490 ALDH1L2Q3SY69 923 aa16.79■□□□□ 0.28
SGMS1-203ENST00000429490 OTUD7AQ8TE49 926 aaPredicted RBP16.79■□□□□ 0.28
SGMS1-203ENST00000429490 RRP9O43818 475 aaKnown RBP16.79■□□□□ 0.28
SGMS1-203ENST00000429490 UGGT1Q9NYU2 1555 aa16.79■□□□□ 0.28
SGMS1-203ENST00000429490 MAP4K4O95819 1239 aaPredicted RBP16.78■□□□□ 0.28
SGMS1-203ENST00000429490 ZGPATQ8N5A5 531 aaKnown RBP16.78■□□□□ 0.28
SGMS1-203ENST00000429490 TSPYL4Q9UJ04 414 aa16.78■□□□□ 0.28
SGMS1-203ENST00000429490 ERVK-7P63135 1459 aa16.78■□□□□ 0.28
SGMS1-203ENST00000429490 DRC7Q8IY82 874 aa16.78■□□□□ 0.28
SGMS1-203ENST00000429490 ADGRL1O94910 1474 aa16.78■□□□□ 0.28
SGMS1-203ENST00000429490 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.77■□□□□ 0.28
SGMS1-203ENST00000429490 GOLGA6L4A6NEF3 574 aa16.77■□□□□ 0.28
SGMS1-203ENST00000429490 LARP6Q9BRS8 491 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms