RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 MAPK8IP3Q9UPT6 1336 aa25.95■■□□□ 1.75
PMPCB-202ENST00000428154 CABP1Q9NZU7 370 aa25.95■■□□□ 1.74
PMPCB-202ENST00000428154 RRP7AQ9Y3A4 280 aaKnown RBP25.95■■□□□ 1.74
PMPCB-202ENST00000428154 DIAPH1O60610 1272 aaKnown RBP25.94■■□□□ 1.74
PMPCB-202ENST00000428154 CLUAP1Q96AJ1 413 aa25.94■■□□□ 1.74
PMPCB-202ENST00000428154 DDRGK1Q96HY6 314 aa25.93■■□□□ 1.74
PMPCB-202ENST00000428154 EDC4Q6P2E9 1401 aaKnown RBP25.92■■□□□ 1.74
PMPCB-202ENST00000428154 TMPOP42166 694 aaKnown RBP25.91■■□□□ 1.74
PMPCB-202ENST00000428154 CPS1P31327 1500 aa25.91■■□□□ 1.74
PMPCB-202ENST00000428154 CPSF1Q10570 1443 aaKnown RBP25.91■■□□□ 1.74
PMPCB-202ENST00000428154 TNRQ92752 1358 aa25.91■■□□□ 1.74
PMPCB-202ENST00000428154 FAM161AQ3B820 660 aa25.91■■□□□ 1.74
PMPCB-202ENST00000428154 WASLO00401 505 aaPredicted RBP25.9■■□□□ 1.74
PMPCB-202ENST00000428154 U2SURPO15042 1029 aaKnown RBP25.9■■□□□ 1.74
PMPCB-202ENST00000428154 PMFBP1Q8TBY8 1022 aa25.9■■□□□ 1.74
PMPCB-202ENST00000428154 FCHSD2O94868 740 aa25.89■■□□□ 1.74
PMPCB-202ENST00000428154 MLECQ14165 292 aa25.89■■□□□ 1.74
PMPCB-202ENST00000428154 WAPLQ7Z5K2 1190 aa25.86■■□□□ 1.73
PMPCB-202ENST00000428154 NEFMP07197 916 aa25.85■■□□□ 1.73
PMPCB-202ENST00000428154 AATKQ6ZMQ8 1374 aa25.85■■□□□ 1.73
PMPCB-202ENST00000428154 UBR1Q8IWV7 1749 aa25.85■■□□□ 1.73
PMPCB-202ENST00000428154 PAK3O75914 559 aaPredicted RBP25.84■■□□□ 1.73
PMPCB-202ENST00000428154 TMEM2Q9UHN6 1383 aa25.84■■□□□ 1.73
PMPCB-202ENST00000428154 PPIP5K1Q6PFW1 1433 aa25.84■■□□□ 1.73
PMPCB-202ENST00000428154 MON2Q7Z3U7 1717 aa25.84■■□□□ 1.73
PMPCB-202ENST00000428154 FRAT1Q92837 279 aaPredicted RBP25.83■■□□□ 1.73
PMPCB-202ENST00000428154 TRIM35Q9UPQ4 493 aa25.83■■□□□ 1.73
PMPCB-202ENST00000428154 COG6Q9Y2V7 657 aa25.83■■□□□ 1.73
PMPCB-202ENST00000428154 METP08581 1390 aa25.83■■□□□ 1.73
PMPCB-202ENST00000428154 PANK1Q8TE04 598 aa25.83■■□□□ 1.72
PMPCB-202ENST00000428154 ZKSCAN2Q63HK3 967 aa25.82■■□□□ 1.72
PMPCB-202ENST00000428154 ZNF692Q9BU19 519 aaPredicted RBP25.82■■□□□ 1.72
PMPCB-202ENST00000428154 ZNF428Q96B54 188 aa25.81■■□□□ 1.72
PMPCB-202ENST00000428154 CCDC61Q9Y6R9 512 aa25.81■■□□□ 1.72
PMPCB-202ENST00000428154 CDK12Q9NYV4 1490 aaPredicted RBP25.81■■□□□ 1.72
PMPCB-202ENST00000428154 MAP2P11137 1827 aaKnown RBP25.8■■□□□ 1.72
PMPCB-202ENST00000428154 NPM2Q86SE8 214 aaKnown RBP25.8■■□□□ 1.72
PMPCB-202ENST00000428154 SENP3Q9H4L4 574 aaPredicted RBP25.8■■□□□ 1.72
PMPCB-202ENST00000428154 POLKQ9UBT6 870 aa25.8■■□□□ 1.72
PMPCB-202ENST00000428154 AKAP12Q02952 1782 aa25.8■■□□□ 1.72
PMPCB-202ENST00000428154 CALD1Q05682 793 aaKnown RBP25.8■■□□□ 1.72
PMPCB-202ENST00000428154 RIPK4P57078 832 aa25.79■■□□□ 1.72
PMPCB-202ENST00000428154 VIRMAQ69YN4 1812 aaKnown RBP25.79■■□□□ 1.72
PMPCB-202ENST00000428154 ITSN1Q15811 1721 aa25.79■■□□□ 1.72
PMPCB-202ENST00000428154 C8orf34Q49A92 452 aa25.77■■□□□ 1.72
PMPCB-202ENST00000428154 NUDT16Q96DE0 195 aaKnown RBP25.77■■□□□ 1.72
PMPCB-202ENST00000428154 LRRC7Q96NW7 1537 aa25.77■■□□□ 1.72
PMPCB-202ENST00000428154 IGHDP01880 384 aa25.77■■□□□ 1.72
PMPCB-202ENST00000428154 PLEKHG1Q9ULL1 1385 aa25.76■■□□□ 1.71
PMPCB-202ENST00000428154 MVPQ14764 893 aaKnown RBP25.76■■□□□ 1.71
PMPCB-202ENST00000428154 RWDD1Q9H446 243 aaPredicted RBP25.76■■□□□ 1.71
PMPCB-202ENST00000428154 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.75■■□□□ 1.71
PMPCB-202ENST00000428154 RSPH6AQ9H0K4 717 aa25.75■■□□□ 1.71
PMPCB-202ENST00000428154 C3P01024 1663 aa25.75■■□□□ 1.71
PMPCB-202ENST00000428154 DZIP1LQ8IYY4 767 aaKnown RBP25.74■■□□□ 1.71
PMPCB-202ENST00000428154 EXOSC9Q06265 439 aaKnown RBP25.74■■□□□ 1.71
PMPCB-202ENST00000428154 ALDH1L2Q3SY69 923 aa25.74■■□□□ 1.71
PMPCB-202ENST00000428154 TXNDC2Q86VQ3 553 aa25.74■■□□□ 1.71
PMPCB-202ENST00000428154 KIF16BQ96L93 1317 aa25.73■■□□□ 1.71
PMPCB-202ENST00000428154 IPO8O15397 1037 aaKnown RBP25.72■■□□□ 1.71
PMPCB-202ENST00000428154 FTSJ3Q8IY81 847 aaKnown RBP25.72■■□□□ 1.71
PMPCB-202ENST00000428154 COG3Q96JB2 828 aa25.72■■□□□ 1.71
PMPCB-202ENST00000428154 ADAMTS13Q76LX8 1427 aa25.72■■□□□ 1.71
PMPCB-202ENST00000428154 RGS3P49796 1198 aa25.71■■□□□ 1.71
PMPCB-202ENST00000428154 BRPF1P55201 1214 aaPredicted RBP25.71■■□□□ 1.71
PMPCB-202ENST00000428154 SKAP1Q86WV1 359 aa25.71■■□□□ 1.71
PMPCB-202ENST00000428154 SMC4Q9NTJ3 1288 aa25.71■■□□□ 1.71
PMPCB-202ENST00000428154 RLBP1P12271 317 aa25.71■■□□□ 1.71
PMPCB-202ENST00000428154 NFE2L2Q16236 605 aa25.7■■□□□ 1.7
PMPCB-202ENST00000428154 DDX19BQ9UMR2 479 aa25.7■■□□□ 1.7
PMPCB-202ENST00000428154 PPM1GO15355 546 aaPredicted RBP25.69■■□□□ 1.7
PMPCB-202ENST00000428154 LMOD3Q0VAK6 560 aa25.69■■□□□ 1.7
PMPCB-202ENST00000428154 TSR2Q969E8 191 aaKnown RBP25.69■■□□□ 1.7
PMPCB-202ENST00000428154 PRKAR2BP31323 418 aa25.68■■□□□ 1.7
PMPCB-202ENST00000428154 IL13P35225 146 aa25.68■■□□□ 1.7
PMPCB-202ENST00000428154 ATF7IPQ6VMQ6 1270 aa25.68■■□□□ 1.7
PMPCB-202ENST00000428154 TOPAZ1Q8N9V7 1692 aa25.67■■□□□ 1.7
PMPCB-202ENST00000428154 BCL2L13Q9BXK5 485 aa25.67■■□□□ 1.7
PMPCB-202ENST00000428154 SSH1Q8WYL5 1049 aa25.66■■□□□ 1.7
PMPCB-202ENST00000428154 USP35Q9P2H5 1018 aa25.66■■□□□ 1.7
PMPCB-202ENST00000428154 PCDHB15Q9Y5E8 787 aa25.66■■□□□ 1.7
PMPCB-202ENST00000428154 CHMP4BQ9H444 224 aaKnown RBP25.66■■□□□ 1.7
PMPCB-202ENST00000428154 SLIT1O75093 1534 aa25.65■■□□□ 1.7
PMPCB-202ENST00000428154 PLEKHG3A1L390 1219 aa25.65■■□□□ 1.7
PMPCB-202ENST00000428154 RTL5Q5HYW3 569 aaPredicted RBP25.65■■□□□ 1.7
PMPCB-202ENST00000428154 NME9Q86XW9 330 aa25.65■■□□□ 1.7
PMPCB-202ENST00000428154 EID1Q9Y6B2 187 aa25.64■■□□□ 1.7
PMPCB-202ENST00000428154 ROBO2Q9HCK4 1378 aa25.64■■□□□ 1.7
PMPCB-202ENST00000428154 GNAI1P63096 354 aa25.63■■□□□ 1.69
PMPCB-202ENST00000428154 NRKQ7Z2Y5 1582 aa25.63■■□□□ 1.69
PMPCB-202ENST00000428154 IFT57Q9NWB7 429 aa25.63■■□□□ 1.69
PMPCB-202ENST00000428154 ARHGAP23Q9P227 1491 aa25.63■■□□□ 1.69
PMPCB-202ENST00000428154 TRIM27P14373 513 aa25.63■■□□□ 1.69
PMPCB-202ENST00000428154 HDAC1Q13547 482 aaPredicted RBP25.63■■□□□ 1.69
PMPCB-202ENST00000428154 DAXXQ9UER7 740 aaPredicted RBP25.63■■□□□ 1.69
PMPCB-202ENST00000428154 DIP2AQ14689 1571 aa25.62■■□□□ 1.69
PMPCB-202ENST00000428154 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.61■■□□□ 1.69
PMPCB-202ENST00000428154 EMILIN1Q9Y6C2 1016 aa25.61■■□□□ 1.69
PMPCB-202ENST00000428154 PRR36Q9H6K5 1346 aa25.6■■□□□ 1.69
PMPCB-202ENST00000428154 ARHGAP45Q92619 1136 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms