RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 PDZRN3Q9UPQ7 1066 aa10.06□□□□□ -0.8
LRCH3-204ENST00000428136 HDAC1Q13547 482 aaPredicted RBP10.05□□□□□ -0.8
LRCH3-204ENST00000428136 REREQ9P2R6 1566 aa10.05□□□□□ -0.8
LRCH3-204ENST00000428136 TBC1D32Q96NH3 1257 aa10.05□□□□□ -0.8
LRCH3-204ENST00000428136 YEATS2Q9ULM3 1422 aa10.05□□□□□ -0.8
LRCH3-204ENST00000428136 DZIP1LQ8IYY4 767 aaKnown RBP10.05□□□□□ -0.8
LRCH3-204ENST00000428136 TERF2IPQ9NYB0 399 aa10.05□□□□□ -0.8
LRCH3-204ENST00000428136 PPIP5K1Q6PFW1 1433 aa10.04□□□□□ -0.8
LRCH3-204ENST00000428136 BRPF1P55201 1214 aaPredicted RBP10.04□□□□□ -0.8
LRCH3-204ENST00000428136 SETD1AO15047 1707 aaKnown RBP10.03□□□□□ -0.8
LRCH3-204ENST00000428136 BECN1Q14457 450 aa10.03□□□□□ -0.8
LRCH3-204ENST00000428136 PNNQ9H307 717 aaKnown RBP10.03□□□□□ -0.8
LRCH3-204ENST00000428136 NUTM2DQ5VT03 806 aaPredicted RBP10.03□□□□□ -0.8
LRCH3-204ENST00000428136 ANTXR1Q9H6X2 564 aa10.03□□□□□ -0.8
LRCH3-204ENST00000428136 ATP7BP35670 1465 aa10.02□□□□□ -0.8
LRCH3-204ENST00000428136 FRAT2O75474 233 aaPredicted RBP10.02□□□□□ -0.81
LRCH3-204ENST00000428136 EXOSC9Q06265 439 aaKnown RBP10.02□□□□□ -0.81
LRCH3-204ENST00000428136 BCL2L13Q9BXK5 485 aa10.02□□□□□ -0.81
LRCH3-204ENST00000428136 DDX19BQ9UMR2 479 aa10.02□□□□□ -0.81
LRCH3-204ENST00000428136 AGLP35573 1532 aa10.02□□□□□ -0.81
LRCH3-204ENST00000428136 TRIM27P14373 513 aa10.02□□□□□ -0.81
LRCH3-204ENST00000428136 SRPK2P78362 688 aaKnown RBP10.02□□□□□ -0.81
LRCH3-204ENST00000428136 GGNBP2Q9H3C7 697 aa10.02□□□□□ -0.81
LRCH3-204ENST00000428136 ALDH1L2Q3SY69 923 aa10.01□□□□□ -0.81
LRCH3-204ENST00000428136 FAM135BQ49AJ0 1406 aa10.01□□□□□ -0.81
LRCH3-204ENST00000428136 ATF7IPQ6VMQ6 1270 aa10.01□□□□□ -0.81
LRCH3-204ENST00000428136 SMC5Q8IY18 1101 aa10.01□□□□□ -0.81
LRCH3-204ENST00000428136 SSH1Q8WYL5 1049 aa10.01□□□□□ -0.81
LRCH3-204ENST00000428136 PRAM1Q96QH2 718 aa10.01□□□□□ -0.81
LRCH3-204ENST00000428136 PPP6R1Q9UPN7 881 aa10.01□□□□□ -0.81
LRCH3-204ENST00000428136 FCHSD2O94868 740 aa10.01□□□□□ -0.81
LRCH3-204ENST00000428136 TSR2Q969E8 191 aaKnown RBP10.01□□□□□ -0.81
LRCH3-204ENST00000428136 RIMBP3CA6NJZ7 1639 aa10.01□□□□□ -0.81
LRCH3-204ENST00000428136 RIMBP3BA6NNM3 1639 aa10.01□□□□□ -0.81
LRCH3-204ENST00000428136 RIMBP3Q9UFD9 1639 aa10.01□□□□□ -0.81
LRCH3-204ENST00000428136 ZNF428Q96B54 188 aa10.01□□□□□ -0.81
LRCH3-204ENST00000428136 DIAPH1O60610 1272 aaKnown RBP10□□□□□ -0.81
LRCH3-204ENST00000428136 SMC4Q9NTJ3 1288 aa10□□□□□ -0.81
LRCH3-204ENST00000428136 ZBTB40Q9NUA8 1239 aa10□□□□□ -0.81
LRCH3-204ENST00000428136 LRRC7Q96NW7 1537 aa10□□□□□ -0.81
LRCH3-204ENST00000428136 HDGFL2Q7Z4V5 671 aaPredicted RBP10□□□□□ -0.81
LRCH3-204ENST00000428136 FTSJ3Q8IY81 847 aaKnown RBP10□□□□□ -0.81
LRCH3-204ENST00000428136 CDK19Q9BWU1 502 aa10□□□□□ -0.81
LRCH3-204ENST00000428136 UPF2Q9HAU5 1272 aaKnown RBP10□□□□□ -0.81
LRCH3-204ENST00000428136 SPATA31D1Q6ZQQ2 1576 aa10□□□□□ -0.81
LRCH3-204ENST00000428136 IL27Q8NEV9 243 aa9.99□□□□□ -0.81
LRCH3-204ENST00000428136 STK26Q9P289 416 aa9.99□□□□□ -0.81
LRCH3-204ENST00000428136 KIF16BQ96L93 1317 aa9.99□□□□□ -0.81
LRCH3-204ENST00000428136 RIPK4P57078 832 aa9.99□□□□□ -0.81
LRCH3-204ENST00000428136 PIK3R4Q99570 1358 aa9.99□□□□□ -0.81
LRCH3-204ENST00000428136 U2SURPO15042 1029 aaKnown RBP9.99□□□□□ -0.81
LRCH3-204ENST00000428136 SAFB2Q14151 953 aaKnown RBP eCLIP9.99□□□□□ -0.81
LRCH3-204ENST00000428136 NOB1Q9ULX3 412 aaKnown RBP9.99□□□□□ -0.81
LRCH3-204ENST00000428136 MINK1Q8N4C8 1332 aaPredicted RBP9.99□□□□□ -0.81
LRCH3-204ENST00000428136 TBC1D2Q9BYX2 928 aa9.98□□□□□ -0.81
LRCH3-204ENST00000428136 RSPH6AQ9H0K4 717 aa9.98□□□□□ -0.81
LRCH3-204ENST00000428136 CPSF1Q10570 1443 aaKnown RBP9.98□□□□□ -0.81
LRCH3-204ENST00000428136 A2ML1A8K2U0 1454 aa9.98□□□□□ -0.81
LRCH3-204ENST00000428136 IPO8O15397 1037 aaKnown RBP9.98□□□□□ -0.81
LRCH3-204ENST00000428136 POGKQ9P215 609 aa9.98□□□□□ -0.81
LRCH3-204ENST00000428136 AATKQ6ZMQ8 1374 aa9.97□□□□□ -0.81
LRCH3-204ENST00000428136 TMEM57Q8N5G2 664 aa9.97□□□□□ -0.81
LRCH3-204ENST00000428136 ARHGAP45Q92619 1136 aa9.97□□□□□ -0.81
LRCH3-204ENST00000428136 CABP1Q9NZU7 370 aa9.97□□□□□ -0.81
LRCH3-204ENST00000428136 POLKQ9UBT6 870 aa9.97□□□□□ -0.81
LRCH3-204ENST00000428136 NRXN3Q9Y4C0 1643 aa9.96□□□□□ -0.81
LRCH3-204ENST00000428136 PTCH1Q13635 1447 aa9.96□□□□□ -0.81
LRCH3-204ENST00000428136 NUCB1Q02818 461 aa9.96□□□□□ -0.82
LRCH3-204ENST00000428136 FBXO31Q5XUX0 539 aaPredicted RBP9.96□□□□□ -0.82
LRCH3-204ENST00000428136 KNDC1Q76NI1 1749 aa9.96□□□□□ -0.82
LRCH3-204ENST00000428136 CDK12Q9NYV4 1490 aaPredicted RBP9.96□□□□□ -0.82
LRCH3-204ENST00000428136 MAP2P11137 1827 aaKnown RBP9.96□□□□□ -0.82
LRCH3-204ENST00000428136 EDC4Q6P2E9 1401 aaKnown RBP9.95□□□□□ -0.82
LRCH3-204ENST00000428136 ZNF853P0CG23 659 aa9.95□□□□□ -0.82
LRCH3-204ENST00000428136 ITPRIPQ8IWB1 547 aa9.95□□□□□ -0.82
LRCH3-204ENST00000428136 MON2Q7Z3U7 1717 aa9.95□□□□□ -0.82
LRCH3-204ENST00000428136 SIRT1Q96EB6 747 aa9.95□□□□□ -0.82
LRCH3-204ENST00000428136 NFE2L2Q16236 605 aa9.94□□□□□ -0.82
LRCH3-204ENST00000428136 C22orf23Q9BZE7 217 aa9.94□□□□□ -0.82
LRCH3-204ENST00000428136 RIMS2Q9UQ26 1411 aa9.94□□□□□ -0.82
LRCH3-204ENST00000428136 NCOA3Q9Y6Q9 1424 aa9.94□□□□□ -0.82
LRCH3-204ENST00000428136 CALD1Q05682 793 aaKnown RBP9.94□□□□□ -0.82
LRCH3-204ENST00000428136 TECPR2O15040 1411 aa9.94□□□□□ -0.82
LRCH3-204ENST00000428136 VAMP4O75379 141 aa9.94□□□□□ -0.82
LRCH3-204ENST00000428136 IL13P35225 146 aa9.94□□□□□ -0.82
LRCH3-204ENST00000428136 RBM25P49756 843 aaKnown RBP9.94□□□□□ -0.82
LRCH3-204ENST00000428136 BRPF3Q9ULD4 1205 aa9.94□□□□□ -0.82
LRCH3-204ENST00000428136 DIP2BQ9P265 1576 aa9.93□□□□□ -0.82
LRCH3-204ENST00000428136 ZBTB7BO15156 539 aaPredicted RBP9.93□□□□□ -0.82
LRCH3-204ENST00000428136 PRKAR2BP31323 418 aa9.93□□□□□ -0.82
LRCH3-204ENST00000428136 MRPL50Q8N5N7 158 aaKnown RBP9.93□□□□□ -0.82
LRCH3-204ENST00000428136 CHMP4BQ9H444 224 aaKnown RBP9.93□□□□□ -0.82
LRCH3-204ENST00000428136 IFT57Q9NWB7 429 aa9.93□□□□□ -0.82
LRCH3-204ENST00000428136 AKAP12Q02952 1782 aa9.93□□□□□ -0.82
LRCH3-204ENST00000428136 C3P01024 1663 aa9.92□□□□□ -0.82
LRCH3-204ENST00000428136 KIF24Q5T7B8 1368 aa9.92□□□□□ -0.82
LRCH3-204ENST00000428136 NRKQ7Z2Y5 1582 aa9.92□□□□□ -0.82
LRCH3-204ENST00000428136 DDIT3P35638 169 aa9.92□□□□□ -0.82
LRCH3-204ENST00000428136 SNX21Q969T3 373 aa9.92□□□□□ -0.82
LRCH3-204ENST00000428136 GCC1Q96CN9 775 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms