RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 PRR14Q9BWN1 585 aa7.47□□□□□ -1.21
NUDCD1-202ENST00000427660 LZTS3O60299 673 aaPredicted RBP7.47□□□□□ -1.21
NUDCD1-202ENST00000427660 SKIP12755 728 aa7.47□□□□□ -1.21
NUDCD1-202ENST00000427660 ARID4AP29374 1257 aaPredicted RBP7.47□□□□□ -1.21
NUDCD1-202ENST00000427660 MCCD1P59942 119 aaPredicted RBP7.47□□□□□ -1.21
NUDCD1-202ENST00000427660 RBM47A0AV96 593 aaKnown RBP7.46□□□□□ -1.22
NUDCD1-202ENST00000427660 F12P00748 615 aaPredicted RBP7.46□□□□□ -1.22
NUDCD1-202ENST00000427660 PHLDB3Q6NSJ2 640 aa7.46□□□□□ -1.22
NUDCD1-202ENST00000427660 NBPF3Q9H094 633 aa7.46□□□□□ -1.22
NUDCD1-202ENST00000427660 SSFA2P28290 1259 aa7.45□□□□□ -1.22
NUDCD1-202ENST00000427660 USB1Q9BQ65 265 aaKnown RBP7.45□□□□□ -1.22
NUDCD1-202ENST00000427660 GPSM3Q9Y4H4 160 aa7.45□□□□□ -1.22
NUDCD1-202ENST00000427660 RNF40O75150 1001 aa7.45□□□□□ -1.22
NUDCD1-202ENST00000427660 PBX2P40425 430 aa7.45□□□□□ -1.22
NUDCD1-202ENST00000427660 MYT1LQ9UL68 1186 aa7.45□□□□□ -1.22
NUDCD1-202ENST00000427660 VPS9D1Q9Y2B5 631 aa7.45□□□□□ -1.22
NUDCD1-202ENST00000427660 USP17L15C9J2P7 530 aa7.44□□□□□ -1.22
NUDCD1-202ENST00000427660 USP17L10C9JJH3 530 aa7.44□□□□□ -1.22
NUDCD1-202ENST00000427660 USP17L13C9JLJ4 530 aa7.44□□□□□ -1.22
NUDCD1-202ENST00000427660 USP17L12C9JPN9 530 aa7.44□□□□□ -1.22
NUDCD1-202ENST00000427660 USP17L11C9JVI0 530 aa7.44□□□□□ -1.22
NUDCD1-202ENST00000427660 USP17L21D6R901 530 aa7.44□□□□□ -1.22
NUDCD1-202ENST00000427660 USP17L18D6R9N7 530 aa7.44□□□□□ -1.22
NUDCD1-202ENST00000427660 USP17L22D6RA61 530 aa7.44□□□□□ -1.22
NUDCD1-202ENST00000427660 USP17L17D6RBQ6 530 aa7.44□□□□□ -1.22
NUDCD1-202ENST00000427660 USP17L19D6RCP7 530 aa7.44□□□□□ -1.22
NUDCD1-202ENST00000427660 USP17L20D6RJB6 530 aa7.44□□□□□ -1.22
NUDCD1-202ENST00000427660 ATP5J2-PTCD1G3V325 749 aa7.44□□□□□ -1.22
NUDCD1-202ENST00000427660 USP17L24Q0WX57 530 aa7.44□□□□□ -1.22
NUDCD1-202ENST00000427660 CLP1Q92989 425 aaKnown RBP7.44□□□□□ -1.22
NUDCD1-202ENST00000427660 IGSF3O75054 1194 aa7.43□□□□□ -1.22
NUDCD1-202ENST00000427660 PTPRNQ16849 979 aa7.43□□□□□ -1.22
NUDCD1-202ENST00000427660 LARP1Q6PKG0 1096 aaKnown RBP7.43□□□□□ -1.22
NUDCD1-202ENST00000427660 MKRN1Q9UHC7 482 aaKnown RBP7.43□□□□□ -1.22
NUDCD1-202ENST00000427660 PTK7Q13308 1070 aa7.43□□□□□ -1.22
NUDCD1-202ENST00000427660 PUS10Q3MIT2 529 aaKnown RBP7.43□□□□□ -1.22
NUDCD1-202ENST00000427660 FAM174AQ8TBP5 190 aa7.43□□□□□ -1.22
NUDCD1-202ENST00000427660 GPKOWQ92917 476 aaPredicted RBP eCLIP7.43□□□□□ -1.22
NUDCD1-202ENST00000427660 CDCA7Q9BWT1 371 aaPredicted RBP7.43□□□□□ -1.22
NUDCD1-202ENST00000427660 SLFNL1Q499Z3 407 aa7.42□□□□□ -1.22
NUDCD1-202ENST00000427660 CRTC2Q53ET0 693 aaPredicted RBP7.42□□□□□ -1.22
NUDCD1-202ENST00000427660 DMRTA1Q5VZB9 504 aa7.42□□□□□ -1.22
NUDCD1-202ENST00000427660 BRICD5Q6PL45 260 aa7.42□□□□□ -1.22
NUDCD1-202ENST00000427660 FAM200AQ8TCP9 573 aa7.42□□□□□ -1.22
NUDCD1-202ENST00000427660 ZFRQ96KR1 1074 aaKnown RBP7.42□□□□□ -1.22
NUDCD1-202ENST00000427660 POTEEQ6S8J3 1075 aa7.42□□□□□ -1.22
NUDCD1-202ENST00000427660 RNF19BQ6ZMZ0 732 aa7.42□□□□□ -1.22
NUDCD1-202ENST00000427660 FAM163AQ96GL9 167 aaPredicted RBP7.42□□□□□ -1.22
NUDCD1-202ENST00000427660 CEP126Q9P2H0 1117 aa7.42□□□□□ -1.22
NUDCD1-202ENST00000427660 BHMG1C9JSJ3 638 aaPredicted RBP7.41□□□□□ -1.22
NUDCD1-202ENST00000427660 RASA1P20936 1047 aa7.41□□□□□ -1.22
NUDCD1-202ENST00000427660 FAM69CQ0P6D2 419 aa7.41□□□□□ -1.22
NUDCD1-202ENST00000427660 ARMC2Q8NEN0 867 aa7.41□□□□□ -1.22
NUDCD1-202ENST00000427660 JUNDP17535 347 aa7.4□□□□□ -1.22
NUDCD1-202ENST00000427660 PTK2Q05397 1052 aa7.4□□□□□ -1.22
NUDCD1-202ENST00000427660 NCOA4Q13772 614 aa7.4□□□□□ -1.22
NUDCD1-202ENST00000427660 SWI5Q1ZZU3 235 aa7.4□□□□□ -1.22
NUDCD1-202ENST00000427660 MAP7D1Q3KQU3 841 aa7.4□□□□□ -1.22
NUDCD1-202ENST00000427660 PDXDC2PQ6P474 469 aa7.4□□□□□ -1.22
NUDCD1-202ENST00000427660 BLOC1S3Q6QNY0 202 aa7.4□□□□□ -1.22
NUDCD1-202ENST00000427660 DNAJC14Q6Y2X3 702 aaPredicted RBP7.4□□□□□ -1.22
NUDCD1-202ENST00000427660 DEPDC4Q8N2C3 294 aa7.4□□□□□ -1.22
NUDCD1-202ENST00000427660 CHIC2Q9UKJ5 165 aa7.4□□□□□ -1.22
NUDCD1-202ENST00000427660 RNF135Q8IUD6 432 aa7.4□□□□□ -1.23
NUDCD1-202ENST00000427660 ANKMY2Q8IV38 441 aa7.4□□□□□ -1.23
NUDCD1-202ENST00000427660 PHTF2Q8N3S3 785 aa7.4□□□□□ -1.23
NUDCD1-202ENST00000427660 LRCH3Q96II8 777 aa7.4□□□□□ -1.23
NUDCD1-202ENST00000427660 MAP10Q9P2G4 905 aa7.4□□□□□ -1.23
NUDCD1-202ENST00000427660 SOWAHDA6NJG2 315 aa7.39□□□□□ -1.23
NUDCD1-202ENST00000427660 UNCXA6NJT0 531 aa7.39□□□□□ -1.23
NUDCD1-202ENST00000427660 FMNL1O95466 1100 aaPredicted RBP7.39□□□□□ -1.23
NUDCD1-202ENST00000427660 PLPP7Q8NBV4 271 aa7.39□□□□□ -1.23
NUDCD1-202ENST00000427660 C1orf216Q8TAB5 229 aa7.39□□□□□ -1.23
NUDCD1-202ENST00000427660 LOC105371045A0A1W2PR82 267 aa7.39□□□□□ -1.23
NUDCD1-202ENST00000427660 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.39□□□□□ -1.23
NUDCD1-202ENST00000427660 SLAIN2Q9P270 581 aa7.39□□□□□ -1.23
NUDCD1-202ENST00000427660 SHROOM4Q9ULL8 1493 aa7.38□□□□□ -1.23
NUDCD1-202ENST00000427660 TK2O00142 265 aa7.38□□□□□ -1.23
NUDCD1-202ENST00000427660 ATP2B4P23634 1241 aa7.38□□□□□ -1.23
NUDCD1-202ENST00000427660 EML3Q32P44 896 aa7.38□□□□□ -1.23
NUDCD1-202ENST00000427660 THAP11Q96EK4 314 aa7.38□□□□□ -1.23
NUDCD1-202ENST00000427660 IGSF5Q9NSI5 407 aa7.38□□□□□ -1.23
NUDCD1-202ENST00000427660 NR1I2O75469 434 aa7.37□□□□□ -1.23
NUDCD1-202ENST00000427660 NBPF14Q5TI25 921 aa7.37□□□□□ -1.23
NUDCD1-202ENST00000427660 TRIM50Q86XT4 487 aa7.37□□□□□ -1.23
NUDCD1-202ENST00000427660 SIRT1Q96EB6 747 aa7.37□□□□□ -1.23
NUDCD1-202ENST00000427660 ERBB3P21860 1342 aa7.37□□□□□ -1.23
NUDCD1-202ENST00000427660 CTHP32929 405 aa7.37□□□□□ -1.23
NUDCD1-202ENST00000427660 ATP1A2P50993 1020 aa7.37□□□□□ -1.23
NUDCD1-202ENST00000427660 VARS2Q5ST30 1063 aaKnown RBP7.37□□□□□ -1.23
NUDCD1-202ENST00000427660 SCUBE3Q8IX30 993 aa7.37□□□□□ -1.23
NUDCD1-202ENST00000427660 MRPL50Q8N5N7 158 aaKnown RBP7.37□□□□□ -1.23
NUDCD1-202ENST00000427660 AXIN2Q9Y2T1 843 aa7.37□□□□□ -1.23
NUDCD1-202ENST00000427660 CCNYL3P0C7X3 344 aa7.36□□□□□ -1.23
NUDCD1-202ENST00000427660 EVA1BQ9NVM1 165 aa7.36□□□□□ -1.23
NUDCD1-202ENST00000427660 MSS51Q4VC12 460 aa7.36□□□□□ -1.23
NUDCD1-202ENST00000427660 OGFOD1Q8N543 542 aa7.36□□□□□ -1.23
NUDCD1-202ENST00000427660 PCDHB9Q9Y5E1 797 aa7.36□□□□□ -1.23
NUDCD1-202ENST00000427660 DPYDQ12882 1025 aa7.35□□□□□ -1.23
NUDCD1-202ENST00000427660 TRAF7Q6Q0C0 670 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms