RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 GTF2F1P35269 517 aaKnown RBP eCLIP6.96□□□□□ -1.3
VTI1BP4-201ENST00000427516 KIAA2012Q0VF49 1180 aa6.96□□□□□ -1.3
VTI1BP4-201ENST00000427516 POTEEQ6S8J3 1075 aa6.96□□□□□ -1.3
VTI1BP4-201ENST00000427516 MYRIPQ8NFW9 859 aa6.96□□□□□ -1.3
VTI1BP4-201ENST00000427516 PANK2Q9BZ23 570 aa6.96□□□□□ -1.3
VTI1BP4-201ENST00000427516 YY1AP1Q9H869 796 aa6.96□□□□□ -1.3
VTI1BP4-201ENST00000427516 ZKSCAN5Q9Y2L8 839 aa6.96□□□□□ -1.3
VTI1BP4-201ENST00000427516 FGD5Q6ZNL6 1462 aa6.96□□□□□ -1.3
VTI1BP4-201ENST00000427516 TEX14Q8IWB6 1497 aa6.96□□□□□ -1.3
VTI1BP4-201ENST00000427516 ARHGEF12Q9NZN5 1544 aa6.96□□□□□ -1.3
VTI1BP4-201ENST00000427516 PTMAP06454 111 aaKnown RBP6.95□□□□□ -1.3
VTI1BP4-201ENST00000427516 RIPK4P57078 832 aa6.95□□□□□ -1.3
VTI1BP4-201ENST00000427516 CHMP4BQ9H444 224 aaKnown RBP6.95□□□□□ -1.3
VTI1BP4-201ENST00000427516 ZHX1Q9UKY1 873 aaPredicted RBP6.95□□□□□ -1.3
VTI1BP4-201ENST00000427516 TCOF1Q13428 1488 aaKnown RBP6.95□□□□□ -1.3
VTI1BP4-201ENST00000427516 USP47Q96K76 1375 aa6.95□□□□□ -1.3
VTI1BP4-201ENST00000427516 E9PCH4 1651 aa6.94□□□□□ -1.3
VTI1BP4-201ENST00000427516 HSP90AB1P08238 724 aaKnown RBP6.94□□□□□ -1.3
VTI1BP4-201ENST00000427516 PDE3AQ14432 1141 aa6.94□□□□□ -1.3
VTI1BP4-201ENST00000427516 KLHL40Q2TBA0 621 aa6.94□□□□□ -1.3
VTI1BP4-201ENST00000427516 HOMEZQ8IX15 550 aa6.94□□□□□ -1.3
VTI1BP4-201ENST00000427516 ZNF622Q969S3 477 aaKnown RBP eCLIP6.94□□□□□ -1.3
VTI1BP4-201ENST00000427516 GZF1Q9H116 711 aaPredicted RBP6.94□□□□□ -1.3
VTI1BP4-201ENST00000427516 ERBB4Q15303 1308 aa6.94□□□□□ -1.3
VTI1BP4-201ENST00000427516 PLXNC1O60486 1568 aa6.94□□□□□ -1.3
VTI1BP4-201ENST00000427516 ROCK1Q13464 1354 aa6.94□□□□□ -1.3
VTI1BP4-201ENST00000427516 ARHGAP31Q2M1Z3 1444 aa6.93□□□□□ -1.3
VTI1BP4-201ENST00000427516 FHOD3Q2V2M9 1422 aa6.93□□□□□ -1.3
VTI1BP4-201ENST00000427516 GAPVD1Q14C86 1478 aa6.93□□□□□ -1.3
VTI1BP4-201ENST00000427516 PHF14O94880 888 aa6.93□□□□□ -1.3
VTI1BP4-201ENST00000427516 ZNF445P59923 1031 aa6.93□□□□□ -1.3
VTI1BP4-201ENST00000427516 SYCP1Q15431 976 aa6.93□□□□□ -1.3
VTI1BP4-201ENST00000427516 PPP1R15BQ5SWA1 713 aa6.93□□□□□ -1.3
VTI1BP4-201ENST00000427516 ZNF771Q7L3S4 317 aaPredicted RBP6.93□□□□□ -1.3
VTI1BP4-201ENST00000427516 OXER1Q8TDS5 423 aa6.93□□□□□ -1.3
VTI1BP4-201ENST00000427516 SNX21Q969T3 373 aa6.93□□□□□ -1.3
VTI1BP4-201ENST00000427516 SYAP1Q96A49 352 aaPredicted RBP6.93□□□□□ -1.3
VTI1BP4-201ENST00000427516 TIGD1Q96MW7 591 aa6.93□□□□□ -1.3
VTI1BP4-201ENST00000427516 EFCC1Q9HA90 598 aa6.93□□□□□ -1.3
VTI1BP4-201ENST00000427516 KDM5CP41229 1560 aa6.93□□□□□ -1.3
VTI1BP4-201ENST00000427516 KIF16BQ96L93 1317 aa6.93□□□□□ -1.3
VTI1BP4-201ENST00000427516 PARD3Q8TEW0 1356 aa6.93□□□□□ -1.3
VTI1BP4-201ENST00000427516 NCOA3Q9Y6Q9 1424 aa6.93□□□□□ -1.3
VTI1BP4-201ENST00000427516 RALGAPBQ86X10 1494 aa6.92□□□□□ -1.3
VTI1BP4-201ENST00000427516 EPRSP07814 1512 aaKnown RBP6.92□□□□□ -1.3
VTI1BP4-201ENST00000427516 TBC1D12O60347 775 aa6.92□□□□□ -1.3
VTI1BP4-201ENST00000427516 HSP90B1P14625 803 aaKnown RBP6.92□□□□□ -1.3
VTI1BP4-201ENST00000427516 PBX2P40425 430 aa6.92□□□□□ -1.3
VTI1BP4-201ENST00000427516 LSM11P83369 360 aaKnown RBP eCLIP6.92□□□□□ -1.3
VTI1BP4-201ENST00000427516 CLEC17AQ6ZS10 378 aa6.92□□□□□ -1.3
VTI1BP4-201ENST00000427516 ANKRD13DQ6ZTN6 518 aa6.92□□□□□ -1.3
VTI1BP4-201ENST00000427516 FAM184AQ8NB25 1140 aa6.92□□□□□ -1.3
VTI1BP4-201ENST00000427516 TBC1D2Q9BYX2 928 aa6.92□□□□□ -1.3
VTI1BP4-201ENST00000427516 TMEM51Q9NW97 253 aa6.92□□□□□ -1.3
VTI1BP4-201ENST00000427516 AXIN2Q9Y2T1 843 aa6.92□□□□□ -1.3
VTI1BP4-201ENST00000427516 NLRP1Q9C000 1473 aa6.92□□□□□ -1.3
VTI1BP4-201ENST00000427516 MFAP1P55081 439 aaKnown RBP6.91□□□□□ -1.3
VTI1BP4-201ENST00000427516 SMC5Q8IY18 1101 aa6.91□□□□□ -1.3
VTI1BP4-201ENST00000427516 L3MBTL2Q969R5 705 aa6.91□□□□□ -1.3
VTI1BP4-201ENST00000427516 PDLIM2Q96JY6 352 aa6.91□□□□□ -1.3
VTI1BP4-201ENST00000427516 OGFRQ9NZT2 677 aa6.91□□□□□ -1.3
VTI1BP4-201ENST00000427516 ATAD2Q6PL18 1390 aa6.91□□□□□ -1.3
VTI1BP4-201ENST00000427516 UHRF1BP1Q6BDS2 1440 aa6.91□□□□□ -1.3
VTI1BP4-201ENST00000427516 MBD5Q9P267 1494 aa6.91□□□□□ -1.3
VTI1BP4-201ENST00000427516 REREQ9P2R6 1566 aa6.91□□□□□ -1.3
VTI1BP4-201ENST00000427516 PSDA5PKW4 1024 aaPredicted RBP6.9□□□□□ -1.3
VTI1BP4-201ENST00000427516 GOLGA6L6A8MZA4 724 aa6.9□□□□□ -1.3
VTI1BP4-201ENST00000427516 CALRP27797 417 aaKnown RBP6.9□□□□□ -1.3
VTI1BP4-201ENST00000427516 NUCB2P80303 420 aa6.9□□□□□ -1.3
VTI1BP4-201ENST00000427516 CADPS2Q86UW7 1296 aa6.9□□□□□ -1.3
VTI1BP4-201ENST00000427516 LARP6Q9BRS8 491 aaKnown RBP6.9□□□□□ -1.3
VTI1BP4-201ENST00000427516 RWDD1Q9H446 243 aaPredicted RBP6.9□□□□□ -1.3
VTI1BP4-201ENST00000427516 GEMIN8Q9NWZ8 242 aaKnown RBP6.9□□□□□ -1.3
VTI1BP4-201ENST00000427516 NKTRP30414 1462 aaKnown RBP6.9□□□□□ -1.31
VTI1BP4-201ENST00000427516 MBD3O95983 291 aa6.89□□□□□ -1.31
VTI1BP4-201ENST00000427516 TNNT3P45378 269 aaPredicted RBP6.89□□□□□ -1.31
VTI1BP4-201ENST00000427516 MFSD10Q14728 455 aa6.89□□□□□ -1.31
VTI1BP4-201ENST00000427516 RAB3GAP1Q15042 981 aa6.89□□□□□ -1.31
VTI1BP4-201ENST00000427516 CAVIN1Q6NZI2 390 aaKnown RBP6.89□□□□□ -1.31
VTI1BP4-201ENST00000427516 PAXIP1Q6ZW49 1069 aaPredicted RBP6.89□□□□□ -1.31
VTI1BP4-201ENST00000427516 GOLGA6L1Q8N7Z2 621 aa6.89□□□□□ -1.31
VTI1BP4-201ENST00000427516 CEP120Q8N960 986 aa6.89□□□□□ -1.31
VTI1BP4-201ENST00000427516 UPF1Q92900 1129 aaKnown RBP eCLIP6.89□□□□□ -1.31
VTI1BP4-201ENST00000427516 MPHOSPH9Q99550 1183 aa6.89□□□□□ -1.31
VTI1BP4-201ENST00000427516 C22orf23Q9BZE7 217 aa6.89□□□□□ -1.31
VTI1BP4-201ENST00000427516 CGNQ9P2M7 1197 aaKnown RBP6.89□□□□□ -1.31
VTI1BP4-201ENST00000427516 DDX49Q9Y6V7 483 aaKnown RBP6.89□□□□□ -1.31
VTI1BP4-201ENST00000427516 ANKRD30BQ9BXX2 1392 aa6.89□□□□□ -1.31
VTI1BP4-201ENST00000427516 PLEKHH1Q9ULM0 1364 aa6.89□□□□□ -1.31
VTI1BP4-201ENST00000427516 UGGT2Q9NYU1 1516 aa6.88□□□□□ -1.31
VTI1BP4-201ENST00000427516 USP19O94966 1318 aa6.88□□□□□ -1.31
VTI1BP4-201ENST00000427516 APPP05067 770 aa6.88□□□□□ -1.31
VTI1BP4-201ENST00000427516 WDR43Q15061 677 aaKnown RBP eCLIP6.88□□□□□ -1.31
VTI1BP4-201ENST00000427516 RNF166Q96A37 237 aaPredicted RBP6.88□□□□□ -1.31
VTI1BP4-201ENST00000427516 CLUAP1Q96AJ1 413 aa6.88□□□□□ -1.31
VTI1BP4-201ENST00000427516 CUL7Q14999 1698 aa6.87□□□□□ -1.31
VTI1BP4-201ENST00000427516 SAMD9Q5K651 1589 aa6.87□□□□□ -1.31
VTI1BP4-201ENST00000427516 ARHGAP33O14559 1287 aa6.87□□□□□ -1.31
VTI1BP4-201ENST00000427516 UVSSAQ2YD98 709 aa6.87□□□□□ -1.31
VTI1BP4-201ENST00000427516 AMER1Q5JTC6 1135 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms