RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 ANKRD36BQ8N2N9 1353 aa24.34■■□□□ 1.49
AC055811.2-201ENST00000427497 NUTM2FA1L443 756 aa24.34■■□□□ 1.49
AC055811.2-201ENST00000427497 ADGRB2O60241 1585 aa24.33■■□□□ 1.49
AC055811.2-201ENST00000427497 NLRP13Q86W25 1043 aa24.33■■□□□ 1.49
AC055811.2-201ENST00000427497 NPHP3Q7Z494 1330 aa24.33■■□□□ 1.48
AC055811.2-201ENST00000427497 NSD3Q9BZ95 1437 aa24.31■■□□□ 1.48
AC055811.2-201ENST00000427497 PXDNQ92626 1479 aa24.31■■□□□ 1.48
AC055811.2-201ENST00000427497 COL22A1Q8NFW1 1626 aaPredicted RBP24.29■■□□□ 1.48
AC055811.2-201ENST00000427497 WASLO00401 505 aaPredicted RBP24.29■■□□□ 1.48
AC055811.2-201ENST00000427497 FOXO3O43524 673 aa24.29■■□□□ 1.48
AC055811.2-201ENST00000427497 RGPD8O14715 1765 aaPredicted RBP24.29■■□□□ 1.48
AC055811.2-201ENST00000427497 KIF1AQ12756 1690 aa24.28■■□□□ 1.48
AC055811.2-201ENST00000427497 AFF2P51816 1311 aa24.28■■□□□ 1.48
AC055811.2-201ENST00000427497 CD163L1Q9NR16 1453 aa24.28■■□□□ 1.48
AC055811.2-201ENST00000427497 PNISRQ8TF01 805 aaKnown RBP24.27■■□□□ 1.48
AC055811.2-201ENST00000427497 C8orf37Q96NL8 207 aa24.27■■□□□ 1.48
AC055811.2-201ENST00000427497 A0A1W2PP64 1363 aa24.26■■□□□ 1.47
AC055811.2-201ENST00000427497 FAM9BQ8IZU0 186 aa24.26■■□□□ 1.47
AC055811.2-201ENST00000427497 XPCQ01831 940 aaPredicted RBP24.25■■□□□ 1.47
AC055811.2-201ENST00000427497 ADAMTS2O95450 1211 aa24.24■■□□□ 1.47
AC055811.2-201ENST00000427497 ATP7BP35670 1465 aa24.23■■□□□ 1.47
AC055811.2-201ENST00000427497 PPP2R1AP30153 589 aa24.23■■□□□ 1.47
AC055811.2-201ENST00000427497 TERF2IPQ9NYB0 399 aa24.23■■□□□ 1.47
AC055811.2-201ENST00000427497 CGNL1Q0VF96 1302 aa24.22■■□□□ 1.47
AC055811.2-201ENST00000427497 RXRBP28702 533 aa24.21■■□□□ 1.47
AC055811.2-201ENST00000427497 NSD2O96028 1365 aa24.2■■□□□ 1.47
AC055811.2-201ENST00000427497 NGLY1Q96IV0 654 aa24.2■■□□□ 1.46
AC055811.2-201ENST00000427497 CABP1Q9NZU7 370 aa24.2■■□□□ 1.46
AC055811.2-201ENST00000427497 HNRNPUQ00839 825 aaKnown RBP eCLIP24.18■■□□□ 1.46
AC055811.2-201ENST00000427497 PHF8Q9UPP1 1060 aa24.18■■□□□ 1.46
AC055811.2-201ENST00000427497 NUDT16Q96DE0 195 aaKnown RBP24.18■■□□□ 1.46
AC055811.2-201ENST00000427497 TOPAZ1Q8N9V7 1692 aa24.17■■□□□ 1.46
AC055811.2-201ENST00000427497 PPIP5K1Q6PFW1 1433 aa24.17■■□□□ 1.46
AC055811.2-201ENST00000427497 ANKARQ7Z5J8 1434 aa24.17■■□□□ 1.46
AC055811.2-201ENST00000427497 MARF1Q9Y4F3 1742 aaKnown RBP24.17■■□□□ 1.46
AC055811.2-201ENST00000427497 HDGFL2Q7Z4V5 671 aaPredicted RBP24.17■■□□□ 1.46
AC055811.2-201ENST00000427497 CPSF1Q10570 1443 aaKnown RBP24.16■■□□□ 1.46
AC055811.2-201ENST00000427497 CDK12Q9NYV4 1490 aaPredicted RBP24.16■■□□□ 1.46
AC055811.2-201ENST00000427497 KRT28Q7Z3Y7 464 aa24.16■■□□□ 1.46
AC055811.2-201ENST00000427497 QTRT2Q9H974 415 aaKnown RBP24.16■■□□□ 1.46
AC055811.2-201ENST00000427497 SPATA31A3Q5VYP0 1347 aa24.16■■□□□ 1.46
AC055811.2-201ENST00000427497 PRR36Q9H6K5 1346 aa24.16■■□□□ 1.46
AC055811.2-201ENST00000427497 CCDC61Q9Y6R9 512 aa24.15■■□□□ 1.46
AC055811.2-201ENST00000427497 ANKRD26Q9UPS8 1709 aa24.14■■□□□ 1.46
AC055811.2-201ENST00000427497 AKAP12Q02952 1782 aa24.13■■□□□ 1.45
AC055811.2-201ENST00000427497 MORC1Q86VD1 984 aa24.12■■□□□ 1.45
AC055811.2-201ENST00000427497 FNBP4Q8N3X1 1017 aaPredicted RBP24.12■■□□□ 1.45
AC055811.2-201ENST00000427497 INSRP06213 1382 aa24.12■■□□□ 1.45
AC055811.2-201ENST00000427497 RBM6P78332 1123 aaKnown RBP24.11■■□□□ 1.45
AC055811.2-201ENST00000427497 USP21Q9UK80 565 aa24.11■■□□□ 1.45
AC055811.2-201ENST00000427497 MON2Q7Z3U7 1717 aa24.11■■□□□ 1.45
AC055811.2-201ENST00000427497 KIF20BQ96Q89 1820 aa24.11■■□□□ 1.45
AC055811.2-201ENST00000427497 TNS3Q68CZ2 1445 aa24.11■■□□□ 1.45
AC055811.2-201ENST00000427497 ITSN1Q15811 1721 aa24.11■■□□□ 1.45
AC055811.2-201ENST00000427497 PSME1Q06323 249 aa24.11■■□□□ 1.45
AC055811.2-201ENST00000427497 PMFBP1Q8TBY8 1022 aa24.09■■□□□ 1.45
AC055811.2-201ENST00000427497 SBNO1A3KN83 1393 aa24.08■■□□□ 1.45
AC055811.2-201ENST00000427497 EDC4Q6P2E9 1401 aaKnown RBP24.08■■□□□ 1.45
AC055811.2-201ENST00000427497 FYB1O15117 783 aa24.08■■□□□ 1.44
AC055811.2-201ENST00000427497 ZBED9Q6R2W3 1325 aa24.08■■□□□ 1.44
AC055811.2-201ENST00000427497 RGS12O14924 1447 aa24.08■■□□□ 1.44
AC055811.2-201ENST00000427497 PLEKHG3A1L390 1219 aa24.06■■□□□ 1.44
AC055811.2-201ENST00000427497 TRPC5Q9UL62 973 aaPredicted RBP24.06■■□□□ 1.44
AC055811.2-201ENST00000427497 BCL9LQ86UU0 1499 aa24.05■■□□□ 1.44
AC055811.2-201ENST00000427497 ATRNO75882 1429 aa24.05■■□□□ 1.44
AC055811.2-201ENST00000427497 POLR3AO14802 1390 aaPredicted RBP24.05■■□□□ 1.44
AC055811.2-201ENST00000427497 TRPM3Q9HCF6 1732 aaPredicted RBP24.05■■□□□ 1.44
AC055811.2-201ENST00000427497 ZNF692Q9BU19 519 aaPredicted RBP24.04■■□□□ 1.44
AC055811.2-201ENST00000427497 ABCA3Q99758 1704 aa24.04■■□□□ 1.44
AC055811.2-201ENST00000427497 BLMP54132 1417 aaPredicted RBP24.03■■□□□ 1.44
AC055811.2-201ENST00000427497 ARHGEF10O15013 1369 aa24.03■■□□□ 1.44
AC055811.2-201ENST00000427497 NRKQ7Z2Y5 1582 aa24.03■■□□□ 1.44
AC055811.2-201ENST00000427497 UPF1Q92900 1129 aaKnown RBP eCLIP24.02■■□□□ 1.442e-6■■■□□ 19.1
AC055811.2-201ENST00000427497 GGNBP2Q9H3C7 697 aa24.02■■□□□ 1.44
AC055811.2-201ENST00000427497 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.02■■□□□ 1.44
AC055811.2-201ENST00000427497 LMOD2Q6P5Q4 547 aa24.02■■□□□ 1.44
AC055811.2-201ENST00000427497 CABLES1Q8TDN4 633 aa24.01■■□□□ 1.43
AC055811.2-201ENST00000427497 ALS2Q96Q42 1657 aa24■■□□□ 1.43
AC055811.2-201ENST00000427497 TNNT2P45379 298 aaPredicted RBP23.99■■□□□ 1.43
AC055811.2-201ENST00000427497 HAP1P54257 671 aaPredicted RBP23.99■■□□□ 1.43
AC055811.2-201ENST00000427497 SLIT2O94813 1529 aa23.99■■□□□ 1.43
AC055811.2-201ENST00000427497 ACEP12821 1306 aa23.99■■□□□ 1.43
AC055811.2-201ENST00000427497 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.98■■□□□ 1.43
AC055811.2-201ENST00000427497 PLEKHG5O94827 1062 aa23.97■■□□□ 1.43
AC055811.2-201ENST00000427497 NGDNQ8NEJ9 315 aaKnown RBP23.97■■□□□ 1.43
AC055811.2-201ENST00000427497 ADAMTS8Q9UP79 889 aa23.97■■□□□ 1.43
AC055811.2-201ENST00000427497 USP6P35125 1406 aa23.97■■□□□ 1.43
AC055811.2-201ENST00000427497 MTHFSP49914 203 aa23.96■■□□□ 1.43
AC055811.2-201ENST00000427497 WDR43Q15061 677 aaKnown RBP eCLIP23.96■■□□□ 1.43
AC055811.2-201ENST00000427497 UNC5CLQ8IV45 518 aa23.95■■□□□ 1.43
AC055811.2-201ENST00000427497 PLCH1Q4KWH8 1693 aa23.95■■□□□ 1.42
AC055811.2-201ENST00000427497 SSH2Q76I76 1423 aa23.95■■□□□ 1.42
AC055811.2-201ENST00000427497 GJD4Q96KN9 370 aaPredicted RBP23.94■■□□□ 1.42
AC055811.2-201ENST00000427497 NWD2Q9ULI1 1742 aa23.94■■□□□ 1.42
AC055811.2-201ENST00000427497 NME9Q86XW9 330 aa23.92■■□□□ 1.42
AC055811.2-201ENST00000427497 GTF3C3Q9Y5Q9 886 aa23.92■■□□□ 1.42
AC055811.2-201ENST00000427497 TTC21BQ7Z4L5 1316 aa23.92■■□□□ 1.42
AC055811.2-201ENST00000427497 CRYBG1Q9Y4K1 1723 aa23.91■■□□□ 1.42
AC055811.2-201ENST00000427497 GLI3P10071 1580 aa23.9■■□□□ 1.42
AC055811.2-201ENST00000427497 CFAP53Q96M91 514 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms