RNA–Protein interactions for RNA: ENST00000426981.5

LIMS2-211, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 1,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-211ENST00000426981 ITSN1Q15811 1721 aa24.24■■□□□ 1.47
LIMS2-211ENST00000426981 ROCK2O75116 1388 aaKnown RBP24.24■■□□□ 1.47
LIMS2-211ENST00000426981 BCL9LQ86UU0 1499 aa24.24■■□□□ 1.47
LIMS2-211ENST00000426981 CABP2Q9NPB3 220 aa24.24■■□□□ 1.47
LIMS2-211ENST00000426981 ABCA3Q99758 1704 aa24.24■■□□□ 1.47
LIMS2-211ENST00000426981 GPRASP1Q5JY77 1395 aa24.23■■□□□ 1.47
LIMS2-211ENST00000426981 ALS2Q96Q42 1657 aa24.23■■□□□ 1.47
LIMS2-211ENST00000426981 RBM6P78332 1123 aaKnown RBP24.23■■□□□ 1.47
LIMS2-211ENST00000426981 FKBP8Q14318 412 aa24.23■■□□□ 1.47
LIMS2-211ENST00000426981 TOPAZ1Q8N9V7 1692 aa24.23■■□□□ 1.47
LIMS2-211ENST00000426981 PAK3O75914 559 aaPredicted RBP24.21■■□□□ 1.47
LIMS2-211ENST00000426981 HAP1P54257 671 aaPredicted RBP24.21■■□□□ 1.47
LIMS2-211ENST00000426981 SRPK2P78362 688 aaKnown RBP24.21■■□□□ 1.47
LIMS2-211ENST00000426981 ARHGEF10O15013 1369 aa24.21■■□□□ 1.47
LIMS2-211ENST00000426981 RGS12O14924 1447 aa24.21■■□□□ 1.47
LIMS2-211ENST00000426981 TRPC5Q9UL62 973 aaPredicted RBP24.2■■□□□ 1.46
LIMS2-211ENST00000426981 CCDC61Q9Y6R9 512 aa24.2■■□□□ 1.46
LIMS2-211ENST00000426981 ACEP12821 1306 aa24.2■■□□□ 1.46
LIMS2-211ENST00000426981 ATRNO75882 1429 aa24.2■■□□□ 1.46
LIMS2-211ENST00000426981 CDK12Q9NYV4 1490 aaPredicted RBP24.18■■□□□ 1.46
LIMS2-211ENST00000426981 SLIT2O94813 1529 aa24.17■■□□□ 1.46
LIMS2-211ENST00000426981 PLEKHG3A1L390 1219 aa24.17■■□□□ 1.46
LIMS2-211ENST00000426981 NUTM2GQ5VZR2 741 aa24.17■■□□□ 1.46
LIMS2-211ENST00000426981 POLR3AO14802 1390 aaPredicted RBP24.16■■□□□ 1.46
LIMS2-211ENST00000426981 FAM83GA6ND36 823 aa24.15■■□□□ 1.46
LIMS2-211ENST00000426981 PPIP5K1Q6PFW1 1433 aa24.14■■□□□ 1.46
LIMS2-211ENST00000426981 UNC5CLQ8IV45 518 aa24.14■■□□□ 1.45
LIMS2-211ENST00000426981 CRYBG1Q9Y4K1 1723 aa24.14■■□□□ 1.45
LIMS2-211ENST00000426981 PLCH1Q4KWH8 1693 aa24.12■■□□□ 1.45
LIMS2-211ENST00000426981 UPF1Q92900 1129 aaKnown RBP eCLIP24.12■■□□□ 1.45
LIMS2-211ENST00000426981 CARD11Q9BXL7 1154 aa24.12■■□□□ 1.45
LIMS2-211ENST00000426981 CABP1Q9NZU7 370 aa24.12■■□□□ 1.45
LIMS2-211ENST00000426981 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.11■■□□□ 1.45
LIMS2-211ENST00000426981 GJD4Q96KN9 370 aaPredicted RBP24.1■■□□□ 1.45
LIMS2-211ENST00000426981 RALGAPBQ86X10 1494 aa24.1■■□□□ 1.45
LIMS2-211ENST00000426981 GLI3P10071 1580 aa24.09■■□□□ 1.45
LIMS2-211ENST00000426981 EVC2Q86UK5 1308 aa24.09■■□□□ 1.45
LIMS2-211ENST00000426981 PHRF1Q9P1Y6 1649 aaKnown RBP24.06■■□□□ 1.44
LIMS2-211ENST00000426981 NWD2Q9ULI1 1742 aa24.05■■□□□ 1.44
LIMS2-211ENST00000426981 BTG4Q9NY30 223 aa24.05■■□□□ 1.44
LIMS2-211ENST00000426981 ZC3H6P61129 1189 aaKnown RBP24.04■■□□□ 1.44
LIMS2-211ENST00000426981 EIF4G2P78344 907 aaKnown RBP eCLIP24.04■■□□□ 1.44
LIMS2-211ENST00000426981 ABTB2Q8N961 1025 aa24.04■■□□□ 1.44
LIMS2-211ENST00000426981 CHRNA2Q15822 529 aa24.03■■□□□ 1.44
LIMS2-211ENST00000426981 NRAPQ86VF7 1730 aa24.03■■□□□ 1.44
LIMS2-211ENST00000426981 VPS72Q15906 364 aa24.02■■□□□ 1.44
LIMS2-211ENST00000426981 CCDC9Q9Y3X0 531 aaKnown RBP24.02■■□□□ 1.44
LIMS2-211ENST00000426981 KIAA0232Q92628 1395 aa24.02■■□□□ 1.44
LIMS2-211ENST00000426981 COL14A1Q05707 1796 aaKnown RBP24.02■■□□□ 1.44
LIMS2-211ENST00000426981 USP6P35125 1406 aa24.01■■□□□ 1.43
LIMS2-211ENST00000426981 PRDM11Q9NQV5 511 aa24.01■■□□□ 1.43
LIMS2-211ENST00000426981 BRWD3Q6RI45 1802 aa23.98■■□□□ 1.43
LIMS2-211ENST00000426981 SSH2Q76I76 1423 aa23.98■■□□□ 1.43
LIMS2-211ENST00000426981 NRKQ7Z2Y5 1582 aa23.97■■□□□ 1.43
LIMS2-211ENST00000426981 SBNO2Q9Y2G9 1366 aa23.97■■□□□ 1.43
LIMS2-211ENST00000426981 RBM19Q9Y4C8 960 aaKnown RBP23.96■■□□□ 1.43
LIMS2-211ENST00000426981 USP19O94966 1318 aa23.96■■□□□ 1.43
LIMS2-211ENST00000426981 AKAP12Q02952 1782 aa23.96■■□□□ 1.43
LIMS2-211ENST00000426981 ST20-MTHFSA0A0A6YYL1 179 aa23.95■■□□□ 1.42
LIMS2-211ENST00000426981 SEPT12Q8IYM1 358 aa23.95■■□□□ 1.42
LIMS2-211ENST00000426981 EP400Q96L91 3159 aa23.95■■□□□ 1.42
LIMS2-211ENST00000426981 NLRP13Q86W25 1043 aa23.94■■□□□ 1.42
LIMS2-211ENST00000426981 PIK3C2AO00443 1686 aa23.94■■□□□ 1.42
LIMS2-211ENST00000426981 ATAD2Q6PL18 1390 aa23.94■■□□□ 1.42
LIMS2-211ENST00000426981 GCP02774 474 aa23.93■■□□□ 1.42
LIMS2-211ENST00000426981 HSPA5P11021 654 aaKnown RBP23.93■■□□□ 1.42
LIMS2-211ENST00000426981 FANCIQ9NVI1 1328 aa23.93■■□□□ 1.42
LIMS2-211ENST00000426981 NLRP6P59044 892 aa23.93■■□□□ 1.42
LIMS2-211ENST00000426981 FAM98CQ17RN3 349 aaKnown RBP23.93■■□□□ 1.42
LIMS2-211ENST00000426981 TESK2Q96S53 571 aa23.93■■□□□ 1.42
LIMS2-211ENST00000426981 CPSF1Q10570 1443 aaKnown RBP23.92■■□□□ 1.42
LIMS2-211ENST00000426981 TTC21BQ7Z4L5 1316 aa23.92■■□□□ 1.42
LIMS2-211ENST00000426981 STRN4Q9NRL3 753 aa23.92■■□□□ 1.42
LIMS2-211ENST00000426981 ONECUT3O60422 494 aaPredicted RBP23.91■■□□□ 1.42
LIMS2-211ENST00000426981 SLC12A5Q9H2X9 1139 aa23.91■■□□□ 1.42
LIMS2-211ENST00000426981 BRD4O60885 1362 aaPredicted RBP23.9■■□□□ 1.42
LIMS2-211ENST00000426981 WASHC2AQ641Q2 1341 aa23.9■■□□□ 1.42
LIMS2-211ENST00000426981 CAMTA1Q9Y6Y1 1673 aa23.9■■□□□ 1.42
LIMS2-211ENST00000426981 CD163L1Q9NR16 1453 aa23.9■■□□□ 1.42
LIMS2-211ENST00000426981 HNRNPUQ00839 825 aaKnown RBP eCLIP23.9■■□□□ 1.42
LIMS2-211ENST00000426981 TMC1Q8TDI8 760 aa23.9■■□□□ 1.42
LIMS2-211ENST00000426981 SPATA31A5Q5VU36 1347 aa23.89■■□□□ 1.42
LIMS2-211ENST00000426981 SPATA31A7Q8IWB4 1347 aa23.89■■□□□ 1.42
LIMS2-211ENST00000426981 ZBTB7CA1YPR0 619 aa23.89■■□□□ 1.41
LIMS2-211ENST00000426981 ZNF692Q9BU19 519 aaPredicted RBP23.89■■□□□ 1.41
LIMS2-211ENST00000426981 ZRANB1Q9UGI0 708 aa23.89■■□□□ 1.41
LIMS2-211ENST00000426981 KTN1Q86UP2 1357 aaKnown RBP23.89■■□□□ 1.41
LIMS2-211ENST00000426981 A0A0G2JS52 829 aa23.87■■□□□ 1.41
LIMS2-211ENST00000426981 LMO7Q8WWI1 1683 aa23.87■■□□□ 1.41
LIMS2-211ENST00000426981 CPDO75976 1380 aa23.87■■□□□ 1.41
LIMS2-211ENST00000426981 CCDC7Q96M83 1385 aa23.87■■□□□ 1.41
LIMS2-211ENST00000426981 SLIT3O75094 1523 aa23.86■■□□□ 1.41
LIMS2-211ENST00000426981 MON2Q7Z3U7 1717 aa23.86■■□□□ 1.41
LIMS2-211ENST00000426981 SOX12O15370 315 aa23.85■■□□□ 1.41
LIMS2-211ENST00000426981 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.85■■□□□ 1.41
LIMS2-211ENST00000426981 LARP1Q6PKG0 1096 aaKnown RBP23.84■■□□□ 1.41
LIMS2-211ENST00000426981 PPP4R2Q9NY27 417 aa23.84■■□□□ 1.41
LIMS2-211ENST00000426981 USP35Q9P2H5 1018 aa23.84■■□□□ 1.41
LIMS2-211ENST00000426981 USP47Q96K76 1375 aa23.84■■□□□ 1.41
LIMS2-211ENST00000426981 SPATA31A1Q5TZJ5 1347 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms