RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 ABCC3O15438 1527 aa21.84■■□□□ 1.09
RARA-206ENST00000425707 XRCC6P12956 609 aaKnown RBP eCLIP21.84■■□□□ 1.09
RARA-206ENST00000425707 SMC4Q9NTJ3 1288 aa21.84■■□□□ 1.09
RARA-206ENST00000425707 CLTCQ00610 1675 aaKnown RBP21.84■■□□□ 1.09
RARA-206ENST00000425707 ZFYVE9O95405 1425 aa21.84■■□□□ 1.09
RARA-206ENST00000425707 DDIT3P35638 169 aa21.83■■□□□ 1.09
RARA-206ENST00000425707 UBE2Q2Q8WVN8 375 aa21.83■■□□□ 1.09
RARA-206ENST00000425707 KIF16BQ96L93 1317 aa21.83■■□□□ 1.09
RARA-206ENST00000425707 CDC42BPGQ6DT37 1551 aa21.83■■□□□ 1.09
RARA-206ENST00000425707 TMPOP42166 694 aaKnown RBP21.82■■□□□ 1.08
RARA-206ENST00000425707 HSCBQ8IWL3 235 aa21.82■■□□□ 1.08
RARA-206ENST00000425707 CIZ1Q9ULV3 898 aaPredicted RBP21.82■■□□□ 1.08
RARA-206ENST00000425707 REREQ9P2R6 1566 aa21.82■■□□□ 1.08
RARA-206ENST00000425707 MRE11P49959 708 aa21.82■■□□□ 1.08
RARA-206ENST00000425707 ZNF692Q9BU19 519 aaPredicted RBP21.82■■□□□ 1.08
RARA-206ENST00000425707 RRAGDQ9NQL2 400 aaPredicted RBP21.82■■□□□ 1.08
RARA-206ENST00000425707 IPO8O15397 1037 aaKnown RBP21.81■■□□□ 1.08
RARA-206ENST00000425707 BRPF1P55201 1214 aaPredicted RBP21.81■■□□□ 1.08
RARA-206ENST00000425707 ZNF428Q96B54 188 aa21.81■■□□□ 1.08
RARA-206ENST00000425707 PNNQ9H307 717 aaKnown RBP21.81■■□□□ 1.08
RARA-206ENST00000425707 ZBTB40Q9NUA8 1239 aa21.81■■□□□ 1.08
RARA-206ENST00000425707 EXOSC9Q06265 439 aaKnown RBP21.81■■□□□ 1.08
RARA-206ENST00000425707 ALDH1L2Q3SY69 923 aa21.81■■□□□ 1.08
RARA-206ENST00000425707 TRIM35Q9UPQ4 493 aa21.81■■□□□ 1.08
RARA-206ENST00000425707 TRAK2O60296 914 aa21.8■■□□□ 1.08
RARA-206ENST00000425707 SSH1Q8WYL5 1049 aa21.8■■□□□ 1.08
RARA-206ENST00000425707 PTMSP20962 102 aa21.8■■□□□ 1.08
RARA-206ENST00000425707 VGFO15240 615 aaPredicted RBP21.79■■□□□ 1.08
RARA-206ENST00000425707 MFAP1P55081 439 aaKnown RBP21.79■■□□□ 1.08
RARA-206ENST00000425707 PPIP5K1Q6PFW1 1433 aa21.79■■□□□ 1.08
RARA-206ENST00000425707 POGZQ7Z3K3 1410 aa21.79■■□□□ 1.08
RARA-206ENST00000425707 NUCB1Q02818 461 aa21.78■■□□□ 1.08
RARA-206ENST00000425707 ASXL2Q76L83 1435 aa21.78■■□□□ 1.08
RARA-206ENST00000425707 CLCN1P35523 988 aa21.77■■□□□ 1.08
RARA-206ENST00000425707 RIMBP3CA6NJZ7 1639 aa21.77■■□□□ 1.08
RARA-206ENST00000425707 RIMBP3BA6NNM3 1639 aa21.77■■□□□ 1.08
RARA-206ENST00000425707 RIMBP3Q9UFD9 1639 aa21.77■■□□□ 1.08
RARA-206ENST00000425707 SIGLEC1Q9BZZ2 1709 aa21.77■■□□□ 1.08
RARA-206ENST00000425707 TMEM132EQ6IEE7 984 aa21.77■■□□□ 1.08
RARA-206ENST00000425707 ITPRIPQ8IWB1 547 aa21.77■■□□□ 1.08
RARA-206ENST00000425707 CHMP4BQ9H444 224 aaKnown RBP21.77■■□□□ 1.08
RARA-206ENST00000425707 PNPLA6Q8IY17 1366 aa21.77■■□□□ 1.08
RARA-206ENST00000425707 CHGAP10645 457 aaKnown RBP21.77■■□□□ 1.07
RARA-206ENST00000425707 TSR2Q969E8 191 aaKnown RBP21.77■■□□□ 1.07
RARA-206ENST00000425707 A0A1W2PP64 1363 aa21.77■■□□□ 1.07
RARA-206ENST00000425707 ATAD2Q6PL18 1390 aa21.76■■□□□ 1.07
RARA-206ENST00000425707 ARHGAP31Q2M1Z3 1444 aa21.76■■□□□ 1.07
RARA-206ENST00000425707 NOB1Q9ULX3 412 aaKnown RBP21.75■■□□□ 1.07
RARA-206ENST00000425707 CFAP65Q6ZU64 1925 aaKnown RBP21.74■■□□□ 1.07
RARA-206ENST00000425707 EIF5BO60841 1220 aaKnown RBP21.74■■□□□ 1.07
RARA-206ENST00000425707 BMP2KLQ5H9B9 411 aa21.74■■□□□ 1.07
RARA-206ENST00000425707 TMEM57Q8N5G2 664 aa21.73■■□□□ 1.07
RARA-206ENST00000425707 KIF20BQ96Q89 1820 aa21.73■■□□□ 1.07
RARA-206ENST00000425707 PIK3R4Q99570 1358 aa21.73■■□□□ 1.07
RARA-206ENST00000425707 SKOR2Q2VWA4 1001 aaPredicted RBP21.72■■□□□ 1.07
RARA-206ENST00000425707 CD163L1Q9NR16 1453 aa21.7■■□□□ 1.06
RARA-206ENST00000425707 CHD1LQ86WJ1 897 aa21.7■■□□□ 1.06
RARA-206ENST00000425707 ARHGAP45Q92619 1136 aa21.7■■□□□ 1.06
RARA-206ENST00000425707 GCC1Q96CN9 775 aa21.7■■□□□ 1.06
RARA-206ENST00000425707 TERF2IPQ9NYB0 399 aa21.7■■□□□ 1.06
RARA-206ENST00000425707 GBP4Q96PP9 640 aa21.69■■□□□ 1.06
RARA-206ENST00000425707 PTPRMP28827 1452 aa21.69■■□□□ 1.06
RARA-206ENST00000425707 GRPEL1Q9HAV7 217 aa21.69■■□□□ 1.06
RARA-206ENST00000425707 PTCH1Q13635 1447 aa21.68■■□□□ 1.06
RARA-206ENST00000425707 CABP2Q9NPB3 220 aa21.68■■□□□ 1.06
RARA-206ENST00000425707 U2SURPO15042 1029 aaKnown RBP21.68■■□□□ 1.06
RARA-206ENST00000425707 RIPK4P57078 832 aa21.68■■□□□ 1.06
RARA-206ENST00000425707 RAB3GAP1Q15042 981 aa21.68■■□□□ 1.06
RARA-206ENST00000425707 SPRYD3Q8NCJ5 442 aa21.68■■□□□ 1.06
RARA-206ENST00000425707 FCHSD2O94868 740 aa21.67■■□□□ 1.06
RARA-206ENST00000425707 DIAPH1O60610 1272 aaKnown RBP21.66■■□□□ 1.06
RARA-206ENST00000425707 FAM135BQ49AJ0 1406 aa21.66■■□□□ 1.06
RARA-206ENST00000425707 LRRC7Q96NW7 1537 aa21.66■■□□□ 1.06
RARA-206ENST00000425707 FYB1O15117 783 aa21.66■■□□□ 1.06
RARA-206ENST00000425707 PANK2Q9BZ23 570 aa21.66■■□□□ 1.06
RARA-206ENST00000425707 CLEC17AQ6ZS10 378 aa21.65■■□□□ 1.06
RARA-206ENST00000425707 CFAP44Q96MT7 982 aa21.64■■□□□ 1.06
RARA-206ENST00000425707 GZF1Q9H116 711 aaPredicted RBP21.64■■□□□ 1.06
RARA-206ENST00000425707 TNPO1Q92973 898 aaKnown RBP21.64■■□□□ 1.05
RARA-206ENST00000425707 CALD1Q05682 793 aaKnown RBP21.64■■□□□ 1.05
RARA-206ENST00000425707 KIF2CQ99661 725 aa21.63■■□□□ 1.05
RARA-206ENST00000425707 GGNBP2Q9H3C7 697 aa21.62■■□□□ 1.05
RARA-206ENST00000425707 IBTKQ9P2D0 1353 aaPredicted RBP21.62■■□□□ 1.05
RARA-206ENST00000425707 KIF24Q5T7B8 1368 aa21.62■■□□□ 1.05
RARA-206ENST00000425707 ZBTB7BO15156 539 aaPredicted RBP21.61■■□□□ 1.05
RARA-206ENST00000425707 HSP90AB1P08238 724 aaKnown RBP21.61■■□□□ 1.05
RARA-206ENST00000425707 GGT6Q6P531 493 aa21.61■■□□□ 1.05
RARA-206ENST00000425707 SLC52A1Q9NWF4 448 aa21.61■■□□□ 1.05
RARA-206ENST00000425707 TMEM131LA2VDJ0 1609 aa21.61■■□□□ 1.05
RARA-206ENST00000425707 LNPKQ9C0E8 428 aa21.61■■□□□ 1.05
RARA-206ENST00000425707 SRPK2P78362 688 aaKnown RBP21.6■■□□□ 1.05
RARA-206ENST00000425707 HDGFL2Q7Z4V5 671 aaPredicted RBP21.59■■□□□ 1.05
RARA-206ENST00000425707 NEO1Q92859 1461 aa21.59■■□□□ 1.05
RARA-206ENST00000425707 DIP2CQ9Y2E4 1556 aa21.58■■□□□ 1.05
RARA-206ENST00000425707 K7ELQ4 463 aaPredicted RBP21.58■■□□□ 1.05
RARA-206ENST00000425707 FAM69CQ0P6D2 419 aa21.58■■□□□ 1.05
RARA-206ENST00000425707 ARHGEF40Q8TER5 1519 aa21.58■■□□□ 1.05
RARA-206ENST00000425707 ABCC4O15439 1325 aa21.58■■□□□ 1.04
RARA-206ENST00000425707 MYO5BQ9ULV0 1848 aa21.58■■□□□ 1.04
RARA-206ENST00000425707 YTHDC2Q9H6S0 1430 aaKnown RBP21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms