RNA–Protein interactions for RNA: ENST00000425174.1

HLA-S-202, Transcript of major histocompatibility complex, class I, S (pseudogene), humanhuman

BASIC

Gene HLA-S, Length 53 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-S-202ENST00000425174 KRT33BQ14525 404 aa-0.54□□□□□ -2.5
HLA-S-202ENST00000425174 NFE2Q16621 373 aaPredicted RBP-0.54□□□□□ -2.5
HLA-S-202ENST00000425174 LCE3EQ5T5B0 92 aa-0.54□□□□□ -2.5
HLA-S-202ENST00000425174 USP51Q70EK9 711 aa-0.54□□□□□ -2.5
HLA-S-202ENST00000425174 KCTD17Q8N5Z5 321 aa-0.54□□□□□ -2.5
HLA-S-202ENST00000425174 ENAHQ8N8S7 591 aaPredicted RBP-0.54□□□□□ -2.5
HLA-S-202ENST00000425174 ZNF398Q8TD17 642 aa-0.54□□□□□ -2.5
HLA-S-202ENST00000425174 ZNRF4Q8WWF5 429 aa-0.54□□□□□ -2.5
HLA-S-202ENST00000425174 KLF2Q9Y5W3 355 aaPredicted RBP-0.54□□□□□ -2.5
HLA-S-202ENST00000425174 TRANK1O15050 2925 aa-0.54□□□□□ -2.5
HLA-S-202ENST00000425174 DNAH3Q8TD57 4116 aa-0.54□□□□□ -2.5
HLA-S-202ENST00000425174 ANK2Q01484 3957 aa-0.54□□□□□ -2.5
HLA-S-202ENST00000425174 ACACAQ13085 2346 aa-0.54□□□□□ -2.5
HLA-S-202ENST00000425174 TECTAO75443 2155 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 CENPEQ02224 2701 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 NBASA2RRP1 2371 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 CHD7Q9P2D1 2997 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 WASLO00401 505 aaPredicted RBP-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 WIPF1O43516 503 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 ZNF202O95125 648 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 IGHA1P01876 353 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 ITGB2P05107 769 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 KRTAP1-4P0C5Y4 121 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 RFX1P22670 979 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 SRSF11Q05519 484 aaKnown RBP-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 EGFEM1PQ0D2K5 195 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 SCARF1Q14162 830 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 INF2Q27J81 1249 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 LCE3CQ5T5A8 94 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 DLK2Q6UY11 383 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 CILP2Q8IUL8 1156 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 FMNL2Q96PY5 1086 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 KCNN2Q9H2S1 579 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 ZNF768Q9H5H4 540 aaKnown RBP-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 ZNF408Q9H9D4 720 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 DACH1Q9UI36 760 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 HCN2Q9UL51 889 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 COL17A1Q9UMD9 1497 aaPredicted RBP-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 AKAP6Q13023 2319 aa-0.55□□□□□ -2.5
HLA-S-202ENST00000425174 CADP27708 2225 aa-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 ANK3Q12955 4377 aaKnown RBP-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 SPEGQ15772 3267 aa-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 WDR33Q9C0J8 1336 aaKnown RBP-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 VPS13DQ5THJ4 4388 aa-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 A0A1W2PNU3 283 aaPredicted RBP-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 C17orf51A8MQB3 221 aa-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 NTN3O00634 580 aaPredicted RBP-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 RTL8CO15255 209 aa-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 HOXD8P13378 290 aaPredicted RBP-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 BUD31P41223 144 aaPredicted RBP-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 CACNB1Q02641 598 aaPredicted RBP-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 RING1Q06587 406 aa-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 ILF3Q12906 894 aaKnown RBP eCLIP-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 KRT31Q15323 416 aa-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 FBLN7Q53RD9 439 aa-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 CRB2Q5IJ48 1285 aa-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 IRX2Q9BZI1 471 aaPredicted RBP-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 ZNF581Q9P0T4 197 aa-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 RBM27Q9P2N5 1060 aaKnown RBP-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 DIDO1Q9BTC0 2240 aaKnown RBP-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 DNAH6Q9C0G6 4158 aa-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 SPTA1P02549 2419 aa-0.56□□□□□ -2.5
HLA-S-202ENST00000425174 DYNC1H1Q14204 4646 aaKnown RBP-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 LOC400499M0QZD8 3231 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 MED13LQ71F56 2210 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 ZFHX3Q15911 3703 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 UNC80Q8N2C7 3258 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 SPTBN1Q01082 2364 aaKnown RBP-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 A0A1B0GVY2 172 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 KRTAP16-1A8MUX0 517 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 AZU1P20160 251 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 POU3F3P20264 500 aaPredicted RBP-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 SPRR2DP22532 72 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 CFPP27918 469 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 GSK3AP49840 483 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 XGP55808 180 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 INSM1Q01101 510 aaPredicted RBP-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 GPR162Q16538 588 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 TSGA10IPQ3SY00 556 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 KRT71Q3SY84 523 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 ZNF598Q86UK7 904 aaKnown RBP-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 SHKBP1Q8TBC3 707 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 PYGO2Q9BRQ0 406 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 ZNF358Q9NW07 568 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 CRIM1Q9NZV1 1036 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 TLL2Q9Y6L7 1015 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 COL11A1P12107 1806 aaPredicted RBP-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 KAT6AQ92794 2004 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 COL1A2P08123 1366 aa-0.57□□□□□ -2.5
HLA-S-202ENST00000425174 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.58□□□□□ -2.5
HLA-S-202ENST00000425174 TRIM66O15016 1216 aa-0.58□□□□□ -2.5
HLA-S-202ENST00000425174 DIAPH1O60610 1272 aaKnown RBP-0.58□□□□□ -2.5
HLA-S-202ENST00000425174 FRMD6-AS1P0C7T7 363 aa-0.58□□□□□ -2.5
HLA-S-202ENST00000425174 HOXD3P31249 432 aaPredicted RBP-0.58□□□□□ -2.5
HLA-S-202ENST00000425174 IRS1P35568 1242 aa-0.58□□□□□ -2.5
HLA-S-202ENST00000425174 KRTAP13-4Q3LI77 160 aa-0.58□□□□□ -2.5
HLA-S-202ENST00000425174 COL13A1Q5TAT6 717 aaPredicted RBP-0.58□□□□□ -2.5
HLA-S-202ENST00000425174 SERTAD4-AS1Q5TG53 156 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms