RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 RNF20Q5VTR2 975 aa16.77■□□□□ 0.28
SREBF2-202ENST00000424354 HECW2Q9P2P5 1572 aa16.77■□□□□ 0.27
SREBF2-202ENST00000424354 ANO2Q9NQ90 1003 aa16.77■□□□□ 0.27
SREBF2-202ENST00000424354 NOM1Q5C9Z4 860 aaKnown RBP16.76■□□□□ 0.27
SREBF2-202ENST00000424354 RUNDC1Q96C34 613 aa16.76■□□□□ 0.27
SREBF2-202ENST00000424354 ACBD3Q9H3P7 528 aa16.76■□□□□ 0.27
SREBF2-202ENST00000424354 SMC3Q9UQE7 1217 aa16.76■□□□□ 0.27
SREBF2-202ENST00000424354 G3V3G9 751 aa16.76■□□□□ 0.27
SREBF2-202ENST00000424354 DCAF8Q5TAQ9 597 aa16.76■□□□□ 0.27
SREBF2-202ENST00000424354 SYNE3Q6ZMZ3 975 aa16.76■□□□□ 0.27
SREBF2-202ENST00000424354 BRD4O60885 1362 aaPredicted RBP16.76■□□□□ 0.27
SREBF2-202ENST00000424354 R3HCC1Q9Y3T6 440 aaKnown RBP16.75■□□□□ 0.27
SREBF2-202ENST00000424354 TRIM29Q14134 588 aa16.75■□□□□ 0.27
SREBF2-202ENST00000424354 KIF7Q2M1P5 1343 aa16.75■□□□□ 0.27
SREBF2-202ENST00000424354 IFT57Q9NWB7 429 aa16.75■□□□□ 0.27
SREBF2-202ENST00000424354 ABCC1P33527 1531 aa16.75■□□□□ 0.27
SREBF2-202ENST00000424354 MARCH6O60337 910 aa16.74■□□□□ 0.27
SREBF2-202ENST00000424354 TRAK2O60296 914 aa16.74■□□□□ 0.27
SREBF2-202ENST00000424354 TNRQ92752 1358 aa16.74■□□□□ 0.27
SREBF2-202ENST00000424354 COG3Q96JB2 828 aa16.74■□□□□ 0.27
SREBF2-202ENST00000424354 MNS1Q8NEH6 495 aa16.73■□□□□ 0.27
SREBF2-202ENST00000424354 LTV1Q96GA3 475 aaPredicted RBP16.73■□□□□ 0.27
SREBF2-202ENST00000424354 CDC45O75419 566 aa16.73■□□□□ 0.27
SREBF2-202ENST00000424354 LETM1O95202 739 aaPredicted RBP16.73■□□□□ 0.27
SREBF2-202ENST00000424354 DIAPH1O60610 1272 aaKnown RBP16.72■□□□□ 0.27
SREBF2-202ENST00000424354 MBD3O95983 291 aa16.72■□□□□ 0.27
SREBF2-202ENST00000424354 CCDC173Q0VFZ6 552 aa16.72■□□□□ 0.27
SREBF2-202ENST00000424354 CCDC47Q96A33 483 aaKnown RBP16.72■□□□□ 0.27
SREBF2-202ENST00000424354 VPS37CA5D8V6 355 aaPredicted RBP16.71■□□□□ 0.27
SREBF2-202ENST00000424354 CCDC73Q6ZRK6 1079 aa16.71■□□□□ 0.27
SREBF2-202ENST00000424354 UHRF1BP1Q6BDS2 1440 aa16.71■□□□□ 0.27
SREBF2-202ENST00000424354 IFIT2P09913 472 aaKnown RBP16.71■□□□□ 0.27
SREBF2-202ENST00000424354 NCBP3Q53F19 620 aaKnown RBP16.71■□□□□ 0.27
SREBF2-202ENST00000424354 TSPOAP1O95153 1857 aa16.71■□□□□ 0.27
SREBF2-202ENST00000424354 DNMT1P26358 1616 aaKnown RBP16.71■□□□□ 0.27
SREBF2-202ENST00000424354 TRAPPC8Q9Y2L5 1435 aa16.7■□□□□ 0.26
SREBF2-202ENST00000424354 RIPK4P57078 832 aa16.7■□□□□ 0.26
SREBF2-202ENST00000424354 CPLX1O14810 134 aa16.7■□□□□ 0.26
SREBF2-202ENST00000424354 HMGN5P82970 282 aaKnown RBP16.7■□□□□ 0.26
SREBF2-202ENST00000424354 GTF2E1P29083 439 aaPredicted RBP16.7■□□□□ 0.26
SREBF2-202ENST00000424354 PDE4CQ08493 712 aa16.7■□□□□ 0.26
SREBF2-202ENST00000424354 LNPKQ9C0E8 428 aa16.7■□□□□ 0.26
SREBF2-202ENST00000424354 HSP90AB4PQ58FF6 505 aa16.7■□□□□ 0.26
SREBF2-202ENST00000424354 AK7Q96M32 723 aa16.7■□□□□ 0.26
SREBF2-202ENST00000424354 ADGRL2O95490 1459 aa16.69■□□□□ 0.26
SREBF2-202ENST00000424354 NEXNQ0ZGT2 675 aa16.69■□□□□ 0.26
SREBF2-202ENST00000424354 TTC37Q6PGP7 1564 aa16.69■□□□□ 0.26
SREBF2-202ENST00000424354 CCDC66A2RUB6 948 aa16.69■□□□□ 0.26
SREBF2-202ENST00000424354 NAT10Q9H0A0 1025 aaKnown RBP16.69■□□□□ 0.26
SREBF2-202ENST00000424354 NCOA1Q15788 1441 aa16.69■□□□□ 0.26
SREBF2-202ENST00000424354 HSP90B2PQ58FF3 399 aa16.69■□□□□ 0.26
SREBF2-202ENST00000424354 MEX3CQ5U5Q3 659 aaKnown RBP16.69■□□□□ 0.26
SREBF2-202ENST00000424354 CDR1P51861 262 aa16.68■□□□□ 0.26
SREBF2-202ENST00000424354 GNAI1P63096 354 aa16.68■□□□□ 0.26
SREBF2-202ENST00000424354 EVA1CP58658 441 aa16.68■□□□□ 0.26
SREBF2-202ENST00000424354 CWC15Q9P013 229 aaKnown RBP16.68■□□□□ 0.26
SREBF2-202ENST00000424354 BRPF3Q9ULD4 1205 aa16.68■□□□□ 0.26
SREBF2-202ENST00000424354 C9orf78Q9NZ63 289 aaPredicted RBP16.68■□□□□ 0.26
SREBF2-202ENST00000424354 PCMTD1Q96MG8 357 aaPredicted RBP16.67■□□□□ 0.26
SREBF2-202ENST00000424354 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.67■□□□□ 0.26
SREBF2-202ENST00000424354 ADGBQ8N7X0 1667 aa16.67■□□□□ 0.26
SREBF2-202ENST00000424354 ERC2O15083 957 aa16.67■□□□□ 0.26
SREBF2-202ENST00000424354 RUFY1Q96T51 708 aa16.67■□□□□ 0.26
SREBF2-202ENST00000424354 ANKRD30BQ9BXX2 1392 aa16.66■□□□□ 0.26
SREBF2-202ENST00000424354 FRAT2O75474 233 aaPredicted RBP16.66■□□□□ 0.26
SREBF2-202ENST00000424354 C1orf141Q5JVX7 400 aa16.66■□□□□ 0.26
SREBF2-202ENST00000424354 MCM2P49736 904 aa16.65■□□□□ 0.26
SREBF2-202ENST00000424354 PANK1Q8TE04 598 aa16.65■□□□□ 0.26
SREBF2-202ENST00000424354 TEFQ10587 303 aa16.65■□□□□ 0.26
SREBF2-202ENST00000424354 MAST1Q9Y2H9 1570 aa16.65■□□□□ 0.26
SREBF2-202ENST00000424354 MSH5O43196 834 aa16.65■□□□□ 0.26
SREBF2-202ENST00000424354 TXNDC2Q86VQ3 553 aa16.65■□□□□ 0.26
SREBF2-202ENST00000424354 TSPY26PQ9H489 355 aa16.65■□□□□ 0.26
SREBF2-202ENST00000424354 SAMD9LQ8IVG5 1584 aa16.64■□□□□ 0.25
SREBF2-202ENST00000424354 TRDNQ13061 729 aa16.64■□□□□ 0.25
SREBF2-202ENST00000424354 MAP3K4Q9Y6R4 1608 aa16.64■□□□□ 0.25
SREBF2-202ENST00000424354 CAVIN1Q6NZI2 390 aaKnown RBP16.63■□□□□ 0.25
SREBF2-202ENST00000424354 WASHC2AQ641Q2 1341 aa16.63■□□□□ 0.25
SREBF2-202ENST00000424354 NAIPQ13075 1403 aa16.63■□□□□ 0.25
SREBF2-202ENST00000424354 G3BP1Q13283 466 aaKnown RBP eCLIP16.63■□□□□ 0.253e-9■□□□□ 8.8
SREBF2-202ENST00000424354 ERCC4Q92889 916 aaPredicted RBP16.63■□□□□ 0.25
SREBF2-202ENST00000424354 RABEP1Q15276 862 aa16.63■□□□□ 0.25
SREBF2-202ENST00000424354 VPS53Q5VIR6 699 aa16.63■□□□□ 0.25
SREBF2-202ENST00000424354 CCP110O43303 1012 aa16.62■□□□□ 0.25
SREBF2-202ENST00000424354 DDX58O95786 925 aaKnown RBP16.62■□□□□ 0.25
SREBF2-202ENST00000424354 BACH2Q9BYV9 841 aa16.62■□□□□ 0.25
SREBF2-202ENST00000424354 NINLQ9Y2I6 1382 aa16.62■□□□□ 0.25
SREBF2-202ENST00000424354 FKBP5Q13451 457 aaPredicted RBP16.61■□□□□ 0.25
SREBF2-202ENST00000424354 RNF214Q8ND24 703 aa16.61■□□□□ 0.25
SREBF2-202ENST00000424354 PDE3AQ14432 1141 aa16.61■□□□□ 0.25
SREBF2-202ENST00000424354 NBPF8Q3BBV2 869 aa16.61■□□□□ 0.25
SREBF2-202ENST00000424354 PKNOX2Q96KN3 472 aa16.61■□□□□ 0.25
SREBF2-202ENST00000424354 IL27Q8NEV9 243 aa16.61■□□□□ 0.25
SREBF2-202ENST00000424354 PSMA5P28066 241 aa16.61■□□□□ 0.25
SREBF2-202ENST00000424354 OLFM4Q6UX06 510 aa16.61■□□□□ 0.25
SREBF2-202ENST00000424354 KDM5DQ9BY66 1539 aa16.6■□□□□ 0.25
SREBF2-202ENST00000424354 SAFBQ15424 915 aaKnown RBP eCLIP16.6■□□□□ 0.25
SREBF2-202ENST00000424354 RPRD2Q5VT52 1461 aaKnown RBP16.59■□□□□ 0.25
SREBF2-202ENST00000424354 DHX8Q14562 1220 aaKnown RBP16.59■□□□□ 0.25
SREBF2-202ENST00000424354 PATL2C9JE40 543 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms