RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 BRICD5Q6PL45 260 aa8.32□□□□□ -1.08
PTP4A1P1-201ENST00000420539 TBC1D2BQ9UPU7 963 aa8.32□□□□□ -1.08
PTP4A1P1-201ENST00000420539 POLR3GLQ9BT43 218 aa8.31□□□□□ -1.08
PTP4A1P1-201ENST00000420539 THAP11Q96EK4 314 aa8.3□□□□□ -1.08
PTP4A1P1-201ENST00000420539 MTRQ99707 1265 aa8.3□□□□□ -1.08
PTP4A1P1-201ENST00000420539 PRM3Q9NNZ6 103 aa8.3□□□□□ -1.08
PTP4A1P1-201ENST00000420539 EPS8L1Q8TE68 723 aa8.29□□□□□ -1.08
PTP4A1P1-201ENST00000420539 GJD4Q96KN9 370 aaPredicted RBP8.29□□□□□ -1.08
PTP4A1P1-201ENST00000420539 SPSB2Q99619 263 aa8.29□□□□□ -1.08
PTP4A1P1-201ENST00000420539 PDE4CQ08493 712 aa8.28□□□□□ -1.08
PTP4A1P1-201ENST00000420539 KCNA1Q09470 495 aa8.28□□□□□ -1.08
PTP4A1P1-201ENST00000420539 NYAP1Q6ZVC0 841 aa8.28□□□□□ -1.08
PTP4A1P1-201ENST00000420539 ZNF516Q92618 1163 aa8.28□□□□□ -1.08
PTP4A1P1-201ENST00000420539 PRDM9Q9NQV7 894 aa8.28□□□□□ -1.08
PTP4A1P1-201ENST00000420539 SALL2Q9Y467 1007 aaPredicted RBP8.28□□□□□ -1.08
PTP4A1P1-201ENST00000420539 NDUFB9Q9Y6M9 179 aa8.28□□□□□ -1.08
PTP4A1P1-201ENST00000420539 ZPR1O75312 459 aa8.27□□□□□ -1.09
PTP4A1P1-201ENST00000420539 PPP1R15AO75807 674 aaPredicted RBP8.27□□□□□ -1.09
PTP4A1P1-201ENST00000420539 NR6A1Q15406 480 aa8.27□□□□□ -1.09
PTP4A1P1-201ENST00000420539 TRIM34Q9BYJ4 488 aa8.27□□□□□ -1.09
PTP4A1P1-201ENST00000420539 JUNDP17535 347 aa8.26□□□□□ -1.09
PTP4A1P1-201ENST00000420539 CCDC125Q86Z20 511 aa8.26□□□□□ -1.09
PTP4A1P1-201ENST00000420539 FAM160A2Q8N612 972 aaPredicted RBP8.26□□□□□ -1.09
PTP4A1P1-201ENST00000420539 ZNF330Q9Y3S2 320 aaPredicted RBP8.26□□□□□ -1.09
PTP4A1P1-201ENST00000420539 PPM1GO15355 546 aaPredicted RBP8.25□□□□□ -1.09
PTP4A1P1-201ENST00000420539 CCDC27Q2M243 656 aa8.25□□□□□ -1.09
PTP4A1P1-201ENST00000420539 DESI1Q6ICB0 168 aa8.25□□□□□ -1.09
PTP4A1P1-201ENST00000420539 LYPD8Q6UX82 237 aa8.25□□□□□ -1.09
PTP4A1P1-201ENST00000420539 WWC1Q8IX03 1113 aa8.25□□□□□ -1.09
PTP4A1P1-201ENST00000420539 ADH1BP00325 375 aa8.24□□□□□ -1.09
PTP4A1P1-201ENST00000420539 CTHP32929 405 aa8.24□□□□□ -1.09
PTP4A1P1-201ENST00000420539 TJAP1Q5JTD0 557 aa8.24□□□□□ -1.09
PTP4A1P1-201ENST00000420539 IL21Q9HBE4 155 aa8.24□□□□□ -1.09
PTP4A1P1-201ENST00000420539 IGSF5Q9NSI5 407 aa8.24□□□□□ -1.09
PTP4A1P1-201ENST00000420539 MAP10Q9P2G4 905 aa8.24□□□□□ -1.09
PTP4A1P1-201ENST00000420539 ACIN1Q9UKV3 1341 aaKnown RBP8.24□□□□□ -1.09
PTP4A1P1-201ENST00000420539 UNCXA6NJT0 531 aa8.23□□□□□ -1.09
PTP4A1P1-201ENST00000420539 SOCS7O14512 581 aa8.23□□□□□ -1.09
PTP4A1P1-201ENST00000420539 BRD1O95696 1058 aa8.23□□□□□ -1.09
PTP4A1P1-201ENST00000420539 MSS51Q4VC12 460 aa8.23□□□□□ -1.09
PTP4A1P1-201ENST00000420539 NKX2-3Q8TAU0 364 aa8.23□□□□□ -1.09
PTP4A1P1-201ENST00000420539 HCSTQ9UBK5 93 aa8.23□□□□□ -1.09
PTP4A1P1-201ENST00000420539 CCDC24Q8N4L8 307 aa8.22□□□□□ -1.09
PTP4A1P1-201ENST00000420539 POM121CA8CG34 1229 aa8.21□□□□□ -1.1
PTP4A1P1-201ENST00000420539 DXOO77932 396 aaKnown RBP8.21□□□□□ -1.1
PTP4A1P1-201ENST00000420539 PTPRNQ16849 979 aa8.21□□□□□ -1.1
PTP4A1P1-201ENST00000420539 NUDT12Q9BQG2 462 aa8.21□□□□□ -1.1
PTP4A1P1-201ENST00000420539 GPR37L1O60883 481 aa8.2□□□□□ -1.1
PTP4A1P1-201ENST00000420539 CCNYL3P0C7X3 344 aa8.2□□□□□ -1.1
PTP4A1P1-201ENST00000420539 UBE2Q2Q8WVN8 375 aa8.2□□□□□ -1.1
PTP4A1P1-201ENST00000420539 SLC6A16Q9GZN6 736 aa8.2□□□□□ -1.1
PTP4A1P1-201ENST00000420539 S1PR4O95977 384 aa8.19□□□□□ -1.1
PTP4A1P1-201ENST00000420539 VAC14Q08AM6 782 aa8.19□□□□□ -1.1
PTP4A1P1-201ENST00000420539 F12P00748 615 aaPredicted RBP8.18□□□□□ -1.1
PTP4A1P1-201ENST00000420539 MMP16P51512 607 aa8.18□□□□□ -1.1
PTP4A1P1-201ENST00000420539 PNMA1Q8ND90 353 aa8.18□□□□□ -1.1
PTP4A1P1-201ENST00000420539 SND1Q7KZF4 910 aaKnown RBP eCLIP8.17□□□□□ -1.1
PTP4A1P1-201ENST00000420539 FAM9AQ8IZU1 332 aaPredicted RBP8.17□□□□□ -1.1
PTP4A1P1-201ENST00000420539 CWC22Q9HCG8 908 aaKnown RBP8.17□□□□□ -1.1
PTP4A1P1-201ENST00000420539 KCNH2Q12809 1159 aa8.16□□□□□ -1.1
PTP4A1P1-201ENST00000420539 CALR3Q96L12 384 aaKnown RBP8.16□□□□□ -1.1
PTP4A1P1-201ENST00000420539 FKBPLQ9UIM3 349 aa8.16□□□□□ -1.1
PTP4A1P1-201ENST00000420539 CANXP27824 592 aaKnown RBP8.15□□□□□ -1.1
PTP4A1P1-201ENST00000420539 KCNC4Q03721 635 aa8.15□□□□□ -1.1
PTP4A1P1-201ENST00000420539 WASHC4Q2M389 1173 aa8.15□□□□□ -1.1
PTP4A1P1-201ENST00000420539 GLMNQ92990 594 aa8.15□□□□□ -1.1
PTP4A1P1-201ENST00000420539 EVA1BQ9NVM1 165 aa8.15□□□□□ -1.1
PTP4A1P1-201ENST00000420539 FCF1Q9Y324 198 aaKnown RBP8.15□□□□□ -1.1
PTP4A1P1-201ENST00000420539 IVNS1ABPQ9Y6Y0 642 aa8.15□□□□□ -1.1
PTP4A1P1-201ENST00000420539 PPEF1O14829 653 aaPredicted RBP8.14□□□□□ -1.11
PTP4A1P1-201ENST00000420539 USTQ9Y2C2 406 aa8.14□□□□□ -1.11
PTP4A1P1-201ENST00000420539 HDGFL1Q5TGJ6 251 aa8.13□□□□□ -1.11
PTP4A1P1-201ENST00000420539 PTCRAQ6ISU1 281 aaPredicted RBP8.13□□□□□ -1.11
PTP4A1P1-201ENST00000420539 RBM47A0AV96 593 aaKnown RBP8.12□□□□□ -1.11
PTP4A1P1-201ENST00000420539 FBXO45P0C2W1 286 aa8.12□□□□□ -1.11
PTP4A1P1-201ENST00000420539 UNC93B1Q9H1C4 597 aa8.12□□□□□ -1.11
PTP4A1P1-201ENST00000420539 LINC01559Q495D7 138 aa8.11□□□□□ -1.11
PTP4A1P1-201ENST00000420539 ADAMTS19Q8TE59 1207 aa8.11□□□□□ -1.11
PTP4A1P1-201ENST00000420539 ZBBXA8MT70 800 aa8.1□□□□□ -1.11
PTP4A1P1-201ENST00000420539 ITGBL1O95965 494 aaPredicted RBP8.1□□□□□ -1.11
PTP4A1P1-201ENST00000420539 NR1H3Q13133 447 aa8.1□□□□□ -1.11
PTP4A1P1-201ENST00000420539 ARMC2Q8NEN0 867 aa8.1□□□□□ -1.11
PTP4A1P1-201ENST00000420539 SMARCA5O60264 1052 aaPredicted RBP8.09□□□□□ -1.11
PTP4A1P1-201ENST00000420539 SEMA3FQ13275 785 aa8.09□□□□□ -1.11
PTP4A1P1-201ENST00000420539 NBPF14Q5TI25 921 aa8.09□□□□□ -1.11
PTP4A1P1-201ENST00000420539 PBXIP1Q96AQ6 731 aa8.09□□□□□ -1.11
PTP4A1P1-201ENST00000420539 CARD14Q9BXL6 1004 aa8.09□□□□□ -1.11
PTP4A1P1-201ENST00000420539 KIAA1522Q9P206 1035 aaPredicted RBP8.09□□□□□ -1.11
PTP4A1P1-201ENST00000420539 ZC3H4Q9UPT8 1303 aaKnown RBP8.08□□□□□ -1.12
PTP4A1P1-201ENST00000420539 RNF223E7ERA6 249 aa8.08□□□□□ -1.12
PTP4A1P1-201ENST00000420539 EIF4G2P78344 907 aaKnown RBP eCLIP8.08□□□□□ -1.12
PTP4A1P1-201ENST00000420539 AGERQ15109 404 aa8.08□□□□□ -1.12
PTP4A1P1-201ENST00000420539 BAP1Q92560 729 aa8.08□□□□□ -1.12
PTP4A1P1-201ENST00000420539 SPATA32Q96LK8 384 aa8.08□□□□□ -1.12
PTP4A1P1-201ENST00000420539 MAGEB6P1A0A0J9YX57 407 aa8.07□□□□□ -1.12
PTP4A1P1-201ENST00000420539 CARNS1A5YM72 827 aa8.07□□□□□ -1.12
PTP4A1P1-201ENST00000420539 CSB-PGBD3P0DP91 1061 aa8.07□□□□□ -1.12
PTP4A1P1-201ENST00000420539 GGCXP38435 758 aa8.07□□□□□ -1.12
PTP4A1P1-201ENST00000420539 PTK2Q05397 1052 aa8.07□□□□□ -1.12
PTP4A1P1-201ENST00000420539 ARHGAP9Q9BRR9 750 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms