RNA–Protein interactions for RNA: ENST00000420077.5

SEMA4F-204, Transcript of ssemaphorin 4F, humanhuman

TSL 1 (best)

Gene SEMA4F, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4F-204ENST00000420077 IGHDP01880 384 aa21.67■■□□□ 1.06
SEMA4F-204ENST00000420077 HDGFL2Q7Z4V5 671 aaPredicted RBP21.67■■□□□ 1.06
SEMA4F-204ENST00000420077 FRAT1Q92837 279 aaPredicted RBP21.67■■□□□ 1.06
SEMA4F-204ENST00000420077 PLEKHF1Q96S99 279 aa21.67■■□□□ 1.06
SEMA4F-204ENST00000420077 CEBPAP49715 358 aaPredicted RBP21.67■■□□□ 1.06
SEMA4F-204ENST00000420077 DDRGK1Q96HY6 314 aa21.66■■□□□ 1.06
SEMA4F-204ENST00000420077 RGS3P49796 1198 aa21.65■■□□□ 1.06
SEMA4F-204ENST00000420077 AAMPQ13685 434 aa21.65■■□□□ 1.06
SEMA4F-204ENST00000420077 NRXN3Q9Y4C0 1643 aa21.65■■□□□ 1.06
SEMA4F-204ENST00000420077 ATP7BP35670 1465 aa21.65■■□□□ 1.06
SEMA4F-204ENST00000420077 U2SURPO15042 1029 aaKnown RBP21.64■■□□□ 1.06
SEMA4F-204ENST00000420077 PNPLA6Q8IY17 1366 aa21.64■■□□□ 1.05
SEMA4F-204ENST00000420077 CDC42BPGQ6DT37 1551 aa21.63■■□□□ 1.05
SEMA4F-204ENST00000420077 CABP1Q9NZU7 370 aa21.63■■□□□ 1.05
SEMA4F-204ENST00000420077 TMPOP42166 694 aaKnown RBP21.62■■□□□ 1.05
SEMA4F-204ENST00000420077 CT47B1P0C2W7 299 aaPredicted RBP21.61■■□□□ 1.05
SEMA4F-204ENST00000420077 RLBP1P12271 317 aa21.61■■□□□ 1.05
SEMA4F-204ENST00000420077 MAPK8IP3Q9UPT6 1336 aa21.61■■□□□ 1.05
SEMA4F-204ENST00000420077 BCL2L13Q9BXK5 485 aa21.61■■□□□ 1.05
SEMA4F-204ENST00000420077 TRIM35Q9UPQ4 493 aa21.6■■□□□ 1.05
SEMA4F-204ENST00000420077 TNNQ9UQP3 1299 aa21.6■■□□□ 1.05
SEMA4F-204ENST00000420077 KNDC1Q76NI1 1749 aa21.59■■□□□ 1.05
SEMA4F-204ENST00000420077 DIAPH1O60610 1272 aaKnown RBP21.59■■□□□ 1.05
SEMA4F-204ENST00000420077 WAPLQ7Z5K2 1190 aa21.58■■□□□ 1.05
SEMA4F-204ENST00000420077 MAP2P11137 1827 aaKnown RBP21.58■■□□□ 1.05
SEMA4F-204ENST00000420077 PMFBP1Q8TBY8 1022 aa21.58■■□□□ 1.04
SEMA4F-204ENST00000420077 LRRC7Q96NW7 1537 aa21.57■■□□□ 1.04
SEMA4F-204ENST00000420077 IL16Q14005 1332 aa21.57■■□□□ 1.04
SEMA4F-204ENST00000420077 TSR2Q969E8 191 aaKnown RBP21.57■■□□□ 1.04
SEMA4F-204ENST00000420077 RTL5Q5HYW3 569 aaPredicted RBP21.56■■□□□ 1.04
SEMA4F-204ENST00000420077 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.56■■□□□ 1.04
SEMA4F-204ENST00000420077 DEKP35659 375 aaKnown RBP21.55■■□□□ 1.04
SEMA4F-204ENST00000420077 PNNQ9H307 717 aaKnown RBP21.55■■□□□ 1.04
SEMA4F-204ENST00000420077 PCDHB15Q9Y5E8 787 aa21.54■■□□□ 1.04
SEMA4F-204ENST00000420077 EXOSC9Q06265 439 aaKnown RBP21.54■■□□□ 1.04
SEMA4F-204ENST00000420077 ZKSCAN2Q63HK3 967 aa21.54■■□□□ 1.04
SEMA4F-204ENST00000420077 CPSF1Q10570 1443 aaKnown RBP21.54■■□□□ 1.04
SEMA4F-204ENST00000420077 MVPQ14764 893 aaKnown RBP21.53■■□□□ 1.04
SEMA4F-204ENST00000420077 MON2Q7Z3U7 1717 aa21.53■■□□□ 1.04
SEMA4F-204ENST00000420077 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.53■■□□□ 1.042e-7■■■■□ 24.8
SEMA4F-204ENST00000420077 LAS1LQ9Y4W2 734 aaKnown RBP21.53■■□□□ 1.04
SEMA4F-204ENST00000420077 FAM135BQ49AJ0 1406 aa21.52■■□□□ 1.04
SEMA4F-204ENST00000420077 EDC4Q6P2E9 1401 aaKnown RBP21.52■■□□□ 1.04
SEMA4F-204ENST00000420077 METP08581 1390 aa21.52■■□□□ 1.04
SEMA4F-204ENST00000420077 RIPK4P57078 832 aa21.52■■□□□ 1.04
SEMA4F-204ENST00000420077 PPIP5K1Q6PFW1 1433 aa21.51■■□□□ 1.03
SEMA4F-204ENST00000420077 FCHSD2O94868 740 aa21.51■■□□□ 1.03
SEMA4F-204ENST00000420077 POLKQ9UBT6 870 aa21.51■■□□□ 1.03
SEMA4F-204ENST00000420077 CPS1P31327 1500 aa21.51■■□□□ 1.03
SEMA4F-204ENST00000420077 TECPR2O15040 1411 aa21.5■■□□□ 1.03
SEMA4F-204ENST00000420077 TNRQ92752 1358 aa21.5■■□□□ 1.03
SEMA4F-204ENST00000420077 WASLO00401 505 aaPredicted RBP21.5■■□□□ 1.03
SEMA4F-204ENST00000420077 PPM1GO15355 546 aaPredicted RBP21.5■■□□□ 1.03
SEMA4F-204ENST00000420077 DZIP1LQ8IYY4 767 aaKnown RBP21.5■■□□□ 1.03
SEMA4F-204ENST00000420077 SMC4Q9NTJ3 1288 aa21.5■■□□□ 1.03
SEMA4F-204ENST00000420077 AKAP12Q02952 1782 aa21.5■■□□□ 1.03
SEMA4F-204ENST00000420077 HDGFP51858 240 aaKnown RBP21.49■■□□□ 1.03
SEMA4F-204ENST00000420077 FTSJ3Q8IY81 847 aaKnown RBP21.49■■□□□ 1.03
SEMA4F-204ENST00000420077 RSPH6AQ9H0K4 717 aa21.48■■□□□ 1.03
SEMA4F-204ENST00000420077 ITSN1Q15811 1721 aa21.48■■□□□ 1.03
SEMA4F-204ENST00000420077 SSH1Q8WYL5 1049 aa21.48■■□□□ 1.03
SEMA4F-204ENST00000420077 UBR1Q8IWV7 1749 aa21.47■■□□□ 1.03
SEMA4F-204ENST00000420077 RWDD1Q9H446 243 aaPredicted RBP21.47■■□□□ 1.03
SEMA4F-204ENST00000420077 USP35Q9P2H5 1018 aa21.47■■□□□ 1.03
SEMA4F-204ENST00000420077 CDK12Q9NYV4 1490 aaPredicted RBP21.47■■□□□ 1.03
SEMA4F-204ENST00000420077 TRIM27P14373 513 aa21.46■■□□□ 1.03
SEMA4F-204ENST00000420077 C3P01024 1663 aa21.46■■□□□ 1.03
SEMA4F-204ENST00000420077 FBLN1P23142 703 aa21.46■■□□□ 1.03
SEMA4F-204ENST00000420077 NEFMP07197 916 aa21.45■■□□□ 1.02
SEMA4F-204ENST00000420077 PRKAR2BP31323 418 aa21.45■■□□□ 1.02
SEMA4F-204ENST00000420077 SIRT1Q96EB6 747 aa21.45■■□□□ 1.02
SEMA4F-204ENST00000420077 FER1L4A9Z1Z3 1794 aa21.45■■□□□ 1.02
SEMA4F-204ENST00000420077 ATF7IPQ6VMQ6 1270 aa21.44■■□□□ 1.02
SEMA4F-204ENST00000420077 TXNDC2Q86VQ3 553 aa21.44■■□□□ 1.02
SEMA4F-204ENST00000420077 PDZRN3Q9UPQ7 1066 aa21.44■■□□□ 1.02
SEMA4F-204ENST00000420077 USP19O94966 1318 aa21.44■■□□□ 1.02
SEMA4F-204ENST00000420077 AATKQ6ZMQ8 1374 aa21.44■■□□□ 1.02
SEMA4F-204ENST00000420077 DAXXQ9UER7 740 aaPredicted RBP21.44■■□□□ 1.02
SEMA4F-204ENST00000420077 SLC4A3P48751 1232 aa21.43■■□□□ 1.02
SEMA4F-204ENST00000420077 NME9Q86XW9 330 aa21.42■■□□□ 1.02
SEMA4F-204ENST00000420077 NUDT16Q96DE0 195 aaKnown RBP21.42■■□□□ 1.02
SEMA4F-204ENST00000420077 DDX19BQ9UMR2 479 aa21.42■■□□□ 1.02
SEMA4F-204ENST00000420077 KIF16BQ96L93 1317 aa21.42■■□□□ 1.02
SEMA4F-204ENST00000420077 EMILIN1Q9Y6C2 1016 aa21.41■■□□□ 1.02
SEMA4F-204ENST00000420077 DLG5Q8TDM6 1919 aa21.41■■□□□ 1.02
SEMA4F-204ENST00000420077 TMEM2Q9UHN6 1383 aa21.41■■□□□ 1.02
SEMA4F-204ENST00000420077 NOB1Q9ULX3 412 aaKnown RBP21.41■■□□□ 1.02
SEMA4F-204ENST00000420077 BCL11AQ9H165 835 aa21.4■■□□□ 1.02
SEMA4F-204ENST00000420077 CCDC61Q9Y6R9 512 aa21.4■■□□□ 1.02
SEMA4F-204ENST00000420077 IL13P35225 146 aa21.4■■□□□ 1.02
SEMA4F-204ENST00000420077 NFE2L2Q16236 605 aa21.4■■□□□ 1.02
SEMA4F-204ENST00000420077 ALDH1L2Q3SY69 923 aa21.4■■□□□ 1.02
SEMA4F-204ENST00000420077 ITPRIPQ8IWB1 547 aa21.39■■□□□ 1.01
SEMA4F-204ENST00000420077 SEC24BO95487 1268 aa21.38■■□□□ 1.01
SEMA4F-204ENST00000420077 HMOX1P09601 288 aa21.38■■□□□ 1.01
SEMA4F-204ENST00000420077 HDAC1Q13547 482 aaPredicted RBP21.38■■□□□ 1.01
SEMA4F-204ENST00000420077 PHACTR3Q96KR7 559 aa21.38■■□□□ 1.01
SEMA4F-204ENST00000420077 ZRANB1Q9UGI0 708 aa21.38■■□□□ 1.01
SEMA4F-204ENST00000420077 TOPAZ1Q8N9V7 1692 aa21.37■■□□□ 1.01
SEMA4F-204ENST00000420077 NRKQ7Z2Y5 1582 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms