RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 A0A0G2JS52 829 aa10.2□□□□□ -0.78
COPS3-202ENST00000417352 RGPD8O14715 1765 aaPredicted RBP10.2□□□□□ -0.78
COPS3-202ENST00000417352 RGS12O14924 1447 aa10.2□□□□□ -0.78
COPS3-202ENST00000417352 MYT1Q01538 1121 aa10.2□□□□□ -0.78
COPS3-202ENST00000417352 PMFBP1Q8TBY8 1022 aa10.2□□□□□ -0.78
COPS3-202ENST00000417352 CABLES1Q8TDN4 633 aa10.2□□□□□ -0.78
COPS3-202ENST00000417352 ABCC11Q96J66 1382 aa10.2□□□□□ -0.78
COPS3-202ENST00000417352 RAB3GAP2Q9H2M9 1393 aa10.2□□□□□ -0.78
COPS3-202ENST00000417352 IFT172Q9UG01 1749 aa10.2□□□□□ -0.78
COPS3-202ENST00000417352 PHF8Q9UPP1 1060 aa10.2□□□□□ -0.78
COPS3-202ENST00000417352 CDC42BPGQ6DT37 1551 aa10.19□□□□□ -0.78
COPS3-202ENST00000417352 CDK12Q9NYV4 1490 aaPredicted RBP10.19□□□□□ -0.78
COPS3-202ENST00000417352 PIK3C2GO75747 1445 aa10.19□□□□□ -0.78
COPS3-202ENST00000417352 FNBP4Q8N3X1 1017 aaPredicted RBP10.19□□□□□ -0.78
COPS3-202ENST00000417352 ATAD2Q6PL18 1390 aa10.18□□□□□ -0.78
COPS3-202ENST00000417352 MINK1Q8N4C8 1332 aaPredicted RBP10.18□□□□□ -0.78
COPS3-202ENST00000417352 PXDNQ92626 1479 aa10.17□□□□□ -0.78
COPS3-202ENST00000417352 SPATA31A3Q5VYP0 1347 aa10.17□□□□□ -0.78
COPS3-202ENST00000417352 GJD4Q96KN9 370 aaPredicted RBP10.17□□□□□ -0.78
COPS3-202ENST00000417352 LAMC1P11047 1609 aa10.17□□□□□ -0.78
COPS3-202ENST00000417352 FMN2Q9NZ56 1722 aa10.16□□□□□ -0.78
COPS3-202ENST00000417352 UNC5CLQ8IV45 518 aa10.16□□□□□ -0.78
COPS3-202ENST00000417352 NGDNQ8NEJ9 315 aaKnown RBP10.16□□□□□ -0.78
COPS3-202ENST00000417352 TSPYL2Q9H2G4 693 aaPredicted RBP10.16□□□□□ -0.78
COPS3-202ENST00000417352 KNDC1Q76NI1 1749 aa10.16□□□□□ -0.78
COPS3-202ENST00000417352 MARF1Q9Y4F3 1742 aaKnown RBP10.16□□□□□ -0.78
COPS3-202ENST00000417352 TECPR2O15040 1411 aa10.16□□□□□ -0.78
COPS3-202ENST00000417352 PRAG1Q86YV5 1406 aa10.16□□□□□ -0.78
COPS3-202ENST00000417352 COL22A1Q8NFW1 1626 aaPredicted RBP10.15□□□□□ -0.78
COPS3-202ENST00000417352 SIRT1Q96EB6 747 aa10.15□□□□□ -0.78
COPS3-202ENST00000417352 KIF1AQ12756 1690 aa10.15□□□□□ -0.79
COPS3-202ENST00000417352 SF3B2Q13435 895 aaKnown RBP10.14□□□□□ -0.79
COPS3-202ENST00000417352 MS4A3Q96HJ5 214 aa10.14□□□□□ -0.79
COPS3-202ENST00000417352 MYOM2P54296 1465 aa10.14□□□□□ -0.79
COPS3-202ENST00000417352 BCL9LQ86UU0 1499 aa10.14□□□□□ -0.79
COPS3-202ENST00000417352 ATRNO75882 1429 aa10.14□□□□□ -0.79
COPS3-202ENST00000417352 GPRASP1Q5JY77 1395 aa10.14□□□□□ -0.79
COPS3-202ENST00000417352 SEPT12Q8IYM1 358 aa10.12□□□□□ -0.79
COPS3-202ENST00000417352 PELP1Q8IZL8 1130 aaKnown RBP10.12□□□□□ -0.79
COPS3-202ENST00000417352 MIER1Q8N108 512 aa10.12□□□□□ -0.79
COPS3-202ENST00000417352 TNS3Q68CZ2 1445 aa10.12□□□□□ -0.79
COPS3-202ENST00000417352 FAM83GA6ND36 823 aa10.11□□□□□ -0.79
COPS3-202ENST00000417352 WASLO00401 505 aaPredicted RBP10.11□□□□□ -0.79
COPS3-202ENST00000417352 NUTM2GQ5VZR2 741 aa10.11□□□□□ -0.79
COPS3-202ENST00000417352 BTG4Q9NY30 223 aa10.11□□□□□ -0.79
COPS3-202ENST00000417352 ARHGEF10O15013 1369 aa10.11□□□□□ -0.79
COPS3-202ENST00000417352 POTEB2H3BUK9 544 aa10.1□□□□□ -0.79
COPS3-202ENST00000417352 CCDC125Q86Z20 511 aa10.1□□□□□ -0.79
COPS3-202ENST00000417352 CCDC61Q9Y6R9 512 aa10.1□□□□□ -0.79
COPS3-202ENST00000417352 RALGAPBQ86X10 1494 aa10.1□□□□□ -0.79
COPS3-202ENST00000417352 NRXN1Q9ULB1 1477 aa10.1□□□□□ -0.79
COPS3-202ENST00000417352 USP32Q8NFA0 1604 aa10.09□□□□□ -0.79
COPS3-202ENST00000417352 VPS72Q15906 364 aa10.09□□□□□ -0.79
COPS3-202ENST00000417352 FAM98CQ17RN3 349 aaKnown RBP10.09□□□□□ -0.79
COPS3-202ENST00000417352 SBNO1A3KN83 1393 aa10.09□□□□□ -0.79
COPS3-202ENST00000417352 EIF3AQ14152 1382 aaKnown RBP10.09□□□□□ -0.79
COPS3-202ENST00000417352 ZBTB7CA1YPR0 619 aa10.08□□□□□ -0.8
COPS3-202ENST00000417352 ASTLQ6HA08 431 aaPredicted RBP10.08□□□□□ -0.8
COPS3-202ENST00000417352 KRT27Q7Z3Y8 459 aa10.08□□□□□ -0.8
COPS3-202ENST00000417352 NUDT16Q96DE0 195 aaKnown RBP10.08□□□□□ -0.8
COPS3-202ENST00000417352 OTUD5Q96G74 571 aa10.08□□□□□ -0.8
COPS3-202ENST00000417352 CDK19Q9BWU1 502 aa10.08□□□□□ -0.8
COPS3-202ENST00000417352 PRDM11Q9NQV5 511 aa10.08□□□□□ -0.8
COPS3-202ENST00000417352 STRN4Q9NRL3 753 aa10.08□□□□□ -0.8
COPS3-202ENST00000417352 BRWD3Q6RI45 1802 aa10.07□□□□□ -0.8
COPS3-202ENST00000417352 PLCH1Q4KWH8 1693 aa10.07□□□□□ -0.8
COPS3-202ENST00000417352 ATMINO43313 823 aaPredicted RBP10.07□□□□□ -0.8
COPS3-202ENST00000417352 EVA1CP58658 441 aa10.07□□□□□ -0.8
COPS3-202ENST00000417352 SRPK2P78362 688 aaKnown RBP10.07□□□□□ -0.8
COPS3-202ENST00000417352 DEFB132Q7Z7B7 95 aa10.07□□□□□ -0.8
COPS3-202ENST00000417352 STAC3Q96MF2 364 aa10.07□□□□□ -0.8
COPS3-202ENST00000417352 USP35Q9P2H5 1018 aa10.07□□□□□ -0.8
COPS3-202ENST00000417352 SLIT2O94813 1529 aa10.07□□□□□ -0.8
COPS3-202ENST00000417352 DLC1Q96QB1 1528 aa10.07□□□□□ -0.8
COPS3-202ENST00000417352 ANKARQ7Z5J8 1434 aa10.07□□□□□ -0.8
COPS3-202ENST00000417352 PRR36Q9H6K5 1346 aa10.07□□□□□ -0.8
COPS3-202ENST00000417352 ZC3H6P61129 1189 aaKnown RBP10.06□□□□□ -0.8
COPS3-202ENST00000417352 NEUROD1Q13562 356 aa10.06□□□□□ -0.8
COPS3-202ENST00000417352 CHRNA2Q15822 529 aa10.06□□□□□ -0.8
COPS3-202ENST00000417352 FAM182BQ5T319 152 aa10.06□□□□□ -0.8
COPS3-202ENST00000417352 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.06□□□□□ -0.8
COPS3-202ENST00000417352 GLI3P10071 1580 aa10.05□□□□□ -0.8
COPS3-202ENST00000417352 HRCP23327 699 aa10.05□□□□□ -0.8
COPS3-202ENST00000417352 ABTB2Q8N961 1025 aa10.05□□□□□ -0.8
COPS3-202ENST00000417352 ADGRB1O14514 1584 aa10.05□□□□□ -0.8
COPS3-202ENST00000417352 TULP4Q9NRJ4 1543 aa10.04□□□□□ -0.8
COPS3-202ENST00000417352 NBPF1Q3BBV0 1214 aa10.04□□□□□ -0.8
COPS3-202ENST00000417352 KIF12Q96FN5 646 aa10.04□□□□□ -0.8
COPS3-202ENST00000417352 METRNQ9UJH8 293 aa10.04□□□□□ -0.8
COPS3-202ENST00000417352 BLMP54132 1417 aaPredicted RBP10.04□□□□□ -0.8
COPS3-202ENST00000417352 ABCA3Q99758 1704 aa10.04□□□□□ -0.8
COPS3-202ENST00000417352 NWD2Q9ULI1 1742 aa10.04□□□□□ -0.8
COPS3-202ENST00000417352 ACEP12821 1306 aa10.04□□□□□ -0.8
COPS3-202ENST00000417352 ADGRB2O60241 1585 aa10.03□□□□□ -0.8
COPS3-202ENST00000417352 SLC39A7Q92504 469 aa10.03□□□□□ -0.8
COPS3-202ENST00000417352 CABP2Q9NPB3 220 aa10.03□□□□□ -0.8
COPS3-202ENST00000417352 ITSN1Q15811 1721 aa10.02□□□□□ -0.8
COPS3-202ENST00000417352 ARHGEF28Q8N1W1 1705 aaKnown RBP10.02□□□□□ -0.8
COPS3-202ENST00000417352 C7P10643 843 aa10.02□□□□□ -0.81
COPS3-202ENST00000417352 BAG6P46379 1132 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms