RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 FMN2Q9NZ56 1722 aa17.44■□□□□ 0.38
HNF4A-204ENST00000415691 CD163L1Q9NR16 1453 aa17.44■□□□□ 0.38
HNF4A-204ENST00000415691 PLEKHG3A1L390 1219 aa17.44■□□□□ 0.38
HNF4A-204ENST00000415691 CADPS2Q86UW7 1296 aa17.44■□□□□ 0.38
HNF4A-204ENST00000415691 RGPD8O14715 1765 aaPredicted RBP17.43■□□□□ 0.38
HNF4A-204ENST00000415691 A0A1W2PP64 1363 aa17.43■□□□□ 0.38
HNF4A-204ENST00000415691 ACEP12821 1306 aa17.42■□□□□ 0.38
HNF4A-204ENST00000415691 TERF2IPQ9NYB0 399 aa17.42■□□□□ 0.38
HNF4A-204ENST00000415691 ANKARQ7Z5J8 1434 aa17.42■□□□□ 0.38
HNF4A-204ENST00000415691 ANKRD36BQ8N2N9 1353 aa17.42■□□□□ 0.38
HNF4A-204ENST00000415691 TCERG1O14776 1098 aaKnown RBP17.41■□□□□ 0.38
HNF4A-204ENST00000415691 NEFMP07197 916 aa17.41■□□□□ 0.38
HNF4A-204ENST00000415691 HDGFL2Q7Z4V5 671 aaPredicted RBP17.41■□□□□ 0.38
HNF4A-204ENST00000415691 PHF8Q9UPP1 1060 aa17.41■□□□□ 0.38
HNF4A-204ENST00000415691 NINLQ9Y2I6 1382 aa17.41■□□□□ 0.38
HNF4A-204ENST00000415691 C1orf167Q5SNV9 1468 aa17.41■□□□□ 0.38
HNF4A-204ENST00000415691 MST1RQ04912 1400 aa17.41■□□□□ 0.38
HNF4A-204ENST00000415691 NGDNQ8NEJ9 315 aaKnown RBP17.41■□□□□ 0.38
HNF4A-204ENST00000415691 RTN4Q9NQC3 1192 aaKnown RBP17.41■□□□□ 0.38
HNF4A-204ENST00000415691 SLAIN2Q9P270 581 aa17.41■□□□□ 0.38
HNF4A-204ENST00000415691 KNSTRNQ9Y448 316 aa17.41■□□□□ 0.38
HNF4A-204ENST00000415691 DCCP43146 1447 aa17.4■□□□□ 0.38
HNF4A-204ENST00000415691 CPSF1Q10570 1443 aaKnown RBP17.39■□□□□ 0.37
HNF4A-204ENST00000415691 NSD3Q9BZ95 1437 aa17.38■□□□□ 0.37
HNF4A-204ENST00000415691 KTN1Q86UP2 1357 aaKnown RBP17.38■□□□□ 0.37
HNF4A-204ENST00000415691 FOXO3O43524 673 aa17.38■□□□□ 0.37
HNF4A-204ENST00000415691 CC2D1BQ5T0F9 858 aaKnown RBP17.38■□□□□ 0.37
HNF4A-204ENST00000415691 DDX17Q92841 729 aaKnown RBP17.38■□□□□ 0.37
HNF4A-204ENST00000415691 TOPAZ1Q8N9V7 1692 aa17.38■□□□□ 0.37
HNF4A-204ENST00000415691 MS4A1P11836 297 aa17.37■□□□□ 0.37
HNF4A-204ENST00000415691 AMER1Q5JTC6 1135 aaPredicted RBP17.37■□□□□ 0.37
HNF4A-204ENST00000415691 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.37■□□□□ 0.37
HNF4A-204ENST00000415691 ZNF692Q9BU19 519 aaPredicted RBP17.37■□□□□ 0.37
HNF4A-204ENST00000415691 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.37■□□□□ 0.37
HNF4A-204ENST00000415691 XPCQ01831 940 aaPredicted RBP17.36■□□□□ 0.37
HNF4A-204ENST00000415691 POLR3AO14802 1390 aaPredicted RBP17.36■□□□□ 0.37
HNF4A-204ENST00000415691 BRINP3Q76B58 766 aa17.35■□□□□ 0.37
HNF4A-204ENST00000415691 PSME1Q06323 249 aa17.34■□□□□ 0.37
HNF4A-204ENST00000415691 FYB1O15117 783 aa17.33■□□□□ 0.36
HNF4A-204ENST00000415691 ZRANB1Q9UGI0 708 aa17.33■□□□□ 0.36
HNF4A-204ENST00000415691 CERKQ8TCT0 537 aa17.32■□□□□ 0.36
HNF4A-204ENST00000415691 GGNBP2Q9H3C7 697 aa17.32■□□□□ 0.36
HNF4A-204ENST00000415691 USP6P35125 1406 aa17.32■□□□□ 0.36
HNF4A-204ENST00000415691 ITSN1Q15811 1721 aa17.32■□□□□ 0.36
HNF4A-204ENST00000415691 GSE1Q14687 1217 aa17.32■□□□□ 0.36
HNF4A-204ENST00000415691 NME9Q86XW9 330 aa17.32■□□□□ 0.36
HNF4A-204ENST00000415691 TTC21BQ7Z4L5 1316 aa17.31■□□□□ 0.36
HNF4A-204ENST00000415691 KRT28Q7Z3Y7 464 aa17.31■□□□□ 0.36
HNF4A-204ENST00000415691 BACH2Q9BYV9 841 aa17.31■□□□□ 0.36
HNF4A-204ENST00000415691 CGNL1Q0VF96 1302 aa17.3■□□□□ 0.36
HNF4A-204ENST00000415691 DDRGK1Q96HY6 314 aa17.3■□□□□ 0.36
HNF4A-204ENST00000415691 PDE4AP27815 886 aa17.3■□□□□ 0.36
HNF4A-204ENST00000415691 EDC4Q6P2E9 1401 aaKnown RBP17.3■□□□□ 0.36
HNF4A-204ENST00000415691 SSH2Q76I76 1423 aa17.3■□□□□ 0.36
HNF4A-204ENST00000415691 LAS1LQ9Y4W2 734 aaKnown RBP17.29■□□□□ 0.36
HNF4A-204ENST00000415691 AKAP12Q02952 1782 aa17.29■□□□□ 0.36
HNF4A-204ENST00000415691 PIP4K2BP78356 416 aa17.28■□□□□ 0.36
HNF4A-204ENST00000415691 NUTM2GQ5VZR2 741 aa17.28■□□□□ 0.36
HNF4A-204ENST00000415691 RSPH6AQ9H0K4 717 aa17.28■□□□□ 0.36
HNF4A-204ENST00000415691 UBAP1LF5GYI3 381 aa17.27■□□□□ 0.36
HNF4A-204ENST00000415691 TNNT2P45379 298 aaPredicted RBP17.27■□□□□ 0.36
HNF4A-204ENST00000415691 TOM1O60784 492 aa17.27■□□□□ 0.35
HNF4A-204ENST00000415691 MON2Q7Z3U7 1717 aa17.27■□□□□ 0.35
HNF4A-204ENST00000415691 MORC1Q86VD1 984 aa17.26■□□□□ 0.35
HNF4A-204ENST00000415691 NPC1L1Q9UHC9 1359 aa17.26■□□□□ 0.35
HNF4A-204ENST00000415691 FBLN1P23142 703 aa17.26■□□□□ 0.35
HNF4A-204ENST00000415691 BRPF3Q9ULD4 1205 aa17.25■□□□□ 0.35
HNF4A-204ENST00000415691 ABTB2Q8N961 1025 aa17.25■□□□□ 0.35
HNF4A-204ENST00000415691 NPHP3Q7Z494 1330 aa17.25■□□□□ 0.35
HNF4A-204ENST00000415691 PARD3Q8TEW0 1356 aa17.24■□□□□ 0.35
HNF4A-204ENST00000415691 PLEKHG5O94827 1062 aa17.24■□□□□ 0.35
HNF4A-204ENST00000415691 RALBP1Q15311 655 aa17.24■□□□□ 0.35
HNF4A-204ENST00000415691 LMOD2Q6P5Q4 547 aa17.24■□□□□ 0.35
HNF4A-204ENST00000415691 TTC21AQ8NDW8 1320 aa17.23■□□□□ 0.35
HNF4A-204ENST00000415691 KIF1AQ12756 1690 aa17.23■□□□□ 0.35
HNF4A-204ENST00000415691 NPM2Q86SE8 214 aaKnown RBP17.23■□□□□ 0.35
HNF4A-204ENST00000415691 NRKQ7Z2Y5 1582 aa17.23■□□□□ 0.35
HNF4A-204ENST00000415691 NLRP6P59044 892 aa17.22■□□□□ 0.35
HNF4A-204ENST00000415691 FAM43AQ8N2R8 423 aa17.21■□□□□ 0.35
HNF4A-204ENST00000415691 COG3Q96JB2 828 aa17.21■□□□□ 0.35
HNF4A-204ENST00000415691 PPP2R1AP30153 589 aa17.21■□□□□ 0.35
HNF4A-204ENST00000415691 RRP1P56182 461 aaKnown RBP17.21■□□□□ 0.35
HNF4A-204ENST00000415691 SOS2Q07890 1332 aaPredicted RBP17.2■□□□□ 0.34
HNF4A-204ENST00000415691 NSD2O96028 1365 aa17.2■□□□□ 0.34
HNF4A-204ENST00000415691 PXDNQ92626 1479 aa17.2■□□□□ 0.34
HNF4A-204ENST00000415691 SOX12O15370 315 aa17.2■□□□□ 0.34
HNF4A-204ENST00000415691 ROBO1Q9Y6N7 1651 aa17.19■□□□□ 0.34
HNF4A-204ENST00000415691 IQSEC2Q5JU85 1478 aa17.19■□□□□ 0.34
HNF4A-204ENST00000415691 BRD4O60885 1362 aaPredicted RBP17.19■□□□□ 0.34
HNF4A-204ENST00000415691 MYBBP1AQ9BQG0 1328 aaKnown RBP17.19■□□□□ 0.34
HNF4A-204ENST00000415691 NFKBIBQ15653 356 aa17.18■□□□□ 0.34
HNF4A-204ENST00000415691 SPATA31A3Q5VYP0 1347 aa17.18■□□□□ 0.34
HNF4A-204ENST00000415691 PNISRQ8TF01 805 aaKnown RBP17.18■□□□□ 0.34
HNF4A-204ENST00000415691 PIK3C2AO00443 1686 aa17.17■□□□□ 0.34
HNF4A-204ENST00000415691 USP31Q70CQ4 1352 aa17.17■□□□□ 0.34
HNF4A-204ENST00000415691 KIF20BQ96Q89 1820 aa17.17■□□□□ 0.34
HNF4A-204ENST00000415691 TRPM3Q9HCF6 1732 aaPredicted RBP17.17■□□□□ 0.34
HNF4A-204ENST00000415691 SBNO1A3KN83 1393 aa17.17■□□□□ 0.34
HNF4A-204ENST00000415691 OVOS2A0A0J9YW53 1432 aa17.16■□□□□ 0.34
HNF4A-204ENST00000415691 OVOS2Q6IE36 1432 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms