RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.98■□□□□ 0.152e-7■■■□□ 16
UBA3-203ENST00000415609 PANK1Q8TE04 598 aa15.98■□□□□ 0.15
UBA3-203ENST00000415609 ZBTB47Q9UFB7 747 aaPredicted RBP15.98■□□□□ 0.15
UBA3-203ENST00000415609 METP08581 1390 aa15.97■□□□□ 0.15
UBA3-203ENST00000415609 DIAPH1O60610 1272 aaKnown RBP15.97■□□□□ 0.15
UBA3-203ENST00000415609 PLEKHF1Q96S99 279 aa15.97■□□□□ 0.15
UBA3-203ENST00000415609 COG6Q9Y2V7 657 aa15.97■□□□□ 0.15
UBA3-203ENST00000415609 TNRQ92752 1358 aa15.96■□□□□ 0.14
UBA3-203ENST00000415609 BCL2L13Q9BXK5 485 aa15.95■□□□□ 0.14
UBA3-203ENST00000415609 TMPOP42166 694 aaKnown RBP15.95■□□□□ 0.14
UBA3-203ENST00000415609 PPIP5K1Q6PFW1 1433 aa15.94■□□□□ 0.14
UBA3-203ENST00000415609 WASLO00401 505 aaPredicted RBP15.94■□□□□ 0.14
UBA3-203ENST00000415609 HDGFP51858 240 aaKnown RBP15.94■□□□□ 0.14
UBA3-203ENST00000415609 TXNDC2Q86VQ3 553 aa15.94■□□□□ 0.14
UBA3-203ENST00000415609 CLUAP1Q96AJ1 413 aa15.94■□□□□ 0.14
UBA3-203ENST00000415609 KNDC1Q76NI1 1749 aa15.94■□□□□ 0.14
UBA3-203ENST00000415609 PNPLA6Q8IY17 1366 aa15.94■□□□□ 0.14
UBA3-203ENST00000415609 PPM1GO15355 546 aaPredicted RBP15.93■□□□□ 0.14
UBA3-203ENST00000415609 RGS3P49796 1198 aa15.93■□□□□ 0.14
UBA3-203ENST00000415609 TSR2Q969E8 191 aaKnown RBP15.92■□□□□ 0.14
UBA3-203ENST00000415609 PNNQ9H307 717 aaKnown RBP15.92■□□□□ 0.14
UBA3-203ENST00000415609 TRIM35Q9UPQ4 493 aa15.92■□□□□ 0.14
UBA3-203ENST00000415609 UBR1Q8IWV7 1749 aa15.92■□□□□ 0.14
UBA3-203ENST00000415609 EDC4Q6P2E9 1401 aaKnown RBP15.91■□□□□ 0.14
UBA3-203ENST00000415609 IGHDP01880 384 aa15.91■□□□□ 0.14
UBA3-203ENST00000415609 FAM135BQ49AJ0 1406 aa15.91■□□□□ 0.14
UBA3-203ENST00000415609 CPS1P31327 1500 aa15.91■□□□□ 0.14
UBA3-203ENST00000415609 CDC42BPGQ6DT37 1551 aa15.91■□□□□ 0.14
UBA3-203ENST00000415609 TNNQ9UQP3 1299 aa15.9■□□□□ 0.14
UBA3-203ENST00000415609 TECPR2O15040 1411 aa15.9■□□□□ 0.14
UBA3-203ENST00000415609 CPSF1Q10570 1443 aaKnown RBP15.9■□□□□ 0.14
UBA3-203ENST00000415609 LRRC7Q96NW7 1537 aa15.9■□□□□ 0.14
UBA3-203ENST00000415609 RIPK4P57078 832 aa15.9■□□□□ 0.14
UBA3-203ENST00000415609 FAM161AQ3B820 660 aa15.9■□□□□ 0.14
UBA3-203ENST00000415609 POLKQ9UBT6 870 aa15.9■□□□□ 0.14
UBA3-203ENST00000415609 TMEM2Q9UHN6 1383 aa15.9■□□□□ 0.14
UBA3-203ENST00000415609 CT47B1P0C2W7 299 aaPredicted RBP15.89■□□□□ 0.13
UBA3-203ENST00000415609 RLBP1P12271 317 aa15.89■□□□□ 0.13
UBA3-203ENST00000415609 FBLN1P23142 703 aa15.89■□□□□ 0.13
UBA3-203ENST00000415609 NUDT16Q96DE0 195 aaKnown RBP15.89■□□□□ 0.13
UBA3-203ENST00000415609 EXOSC9Q06265 439 aaKnown RBP15.89■□□□□ 0.13
UBA3-203ENST00000415609 NME9Q86XW9 330 aa15.89■□□□□ 0.13
UBA3-203ENST00000415609 IL16Q14005 1332 aa15.88■□□□□ 0.13
UBA3-203ENST00000415609 MAP2P11137 1827 aaKnown RBP15.88■□□□□ 0.13
UBA3-203ENST00000415609 AAMPQ13685 434 aa15.88■□□□□ 0.13
UBA3-203ENST00000415609 FCHSD2O94868 740 aa15.87■□□□□ 0.13
UBA3-203ENST00000415609 NEFMP07197 916 aa15.87■□□□□ 0.13
UBA3-203ENST00000415609 SIRT1Q96EB6 747 aa15.87■□□□□ 0.13
UBA3-203ENST00000415609 ITSN1Q15811 1721 aa15.87■□□□□ 0.13
UBA3-203ENST00000415609 MON2Q7Z3U7 1717 aa15.87■□□□□ 0.13
UBA3-203ENST00000415609 NCKAP5LQ9HCH0 1330 aa15.87■□□□□ 0.13
UBA3-203ENST00000415609 PRKAR2BP31323 418 aa15.87■□□□□ 0.13
UBA3-203ENST00000415609 C8orf34Q49A92 452 aa15.87■□□□□ 0.13
UBA3-203ENST00000415609 ZKSCAN2Q63HK3 967 aa15.87■□□□□ 0.13
UBA3-203ENST00000415609 SMC4Q9NTJ3 1288 aa15.87■□□□□ 0.13
UBA3-203ENST00000415609 CCDC61Q9Y6R9 512 aa15.87■□□□□ 0.13
UBA3-203ENST00000415609 NBR1Q14596 966 aa15.86■□□□□ 0.13
UBA3-203ENST00000415609 FTSJ3Q8IY81 847 aaKnown RBP15.86■□□□□ 0.13
UBA3-203ENST00000415609 PMFBP1Q8TBY8 1022 aa15.86■□□□□ 0.13
UBA3-203ENST00000415609 RSPH6AQ9H0K4 717 aa15.86■□□□□ 0.13
UBA3-203ENST00000415609 EMILIN1Q9Y6C2 1016 aa15.85■□□□□ 0.13
UBA3-203ENST00000415609 TRHP20396 242 aaPredicted RBP15.85■□□□□ 0.13
UBA3-203ENST00000415609 DDRGK1Q96HY6 314 aa15.85■□□□□ 0.13
UBA3-203ENST00000415609 ZRANB1Q9UGI0 708 aa15.85■□□□□ 0.13
UBA3-203ENST00000415609 CDK12Q9NYV4 1490 aaPredicted RBP15.84■□□□□ 0.13
UBA3-203ENST00000415609 AKAP12Q02952 1782 aa15.84■□□□□ 0.13
UBA3-203ENST00000415609 COG3Q96JB2 828 aa15.84■□□□□ 0.13
UBA3-203ENST00000415609 ROBO2Q9HCK4 1378 aa15.84■□□□□ 0.13
UBA3-203ENST00000415609 ADAMTS13Q76LX8 1427 aa15.84■□□□□ 0.13
UBA3-203ENST00000415609 HMOX1P09601 288 aa15.84■□□□□ 0.13
UBA3-203ENST00000415609 MVPQ14764 893 aaKnown RBP15.84■□□□□ 0.13
UBA3-203ENST00000415609 DZIP1LQ8IYY4 767 aaKnown RBP15.84■□□□□ 0.13
UBA3-203ENST00000415609 PCDHB15Q9Y5E8 787 aa15.84■□□□□ 0.13
UBA3-203ENST00000415609 C3P01024 1663 aa15.83■□□□□ 0.12
UBA3-203ENST00000415609 SSH1Q8WYL5 1049 aa15.82■□□□□ 0.12
UBA3-203ENST00000415609 AATKQ6ZMQ8 1374 aa15.82■□□□□ 0.12
UBA3-203ENST00000415609 PLEKHG1Q9ULL1 1385 aa15.82■□□□□ 0.12
UBA3-203ENST00000415609 PRR36Q9H6K5 1346 aa15.82■□□□□ 0.12
UBA3-203ENST00000415609 LTKP29376 864 aa15.8■□□□□ 0.12
UBA3-203ENST00000415609 IL13P35225 146 aa15.8■□□□□ 0.12
UBA3-203ENST00000415609 CEBPAP49715 358 aaPredicted RBP15.8■□□□□ 0.12
UBA3-203ENST00000415609 NFE2L2Q16236 605 aa15.8■□□□□ 0.12
UBA3-203ENST00000415609 VIRMAQ69YN4 1812 aaKnown RBP15.8■□□□□ 0.12
UBA3-203ENST00000415609 TRIM27P14373 513 aa15.8■□□□□ 0.12
UBA3-203ENST00000415609 RRS1Q15050 365 aaKnown RBP15.8■□□□□ 0.12
UBA3-203ENST00000415609 PHACTR3Q96KR7 559 aa15.8■□□□□ 0.12
UBA3-203ENST00000415609 ZNF692Q9BU19 519 aaPredicted RBP15.8■□□□□ 0.12
UBA3-203ENST00000415609 RWDD1Q9H446 243 aaPredicted RBP15.8■□□□□ 0.12
UBA3-203ENST00000415609 LAS1LQ9Y4W2 734 aaKnown RBP15.8■□□□□ 0.12
UBA3-203ENST00000415609 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.79■□□□□ 0.12
UBA3-203ENST00000415609 ATF7IPQ6VMQ6 1270 aa15.78■□□□□ 0.12
UBA3-203ENST00000415609 NOB1Q9ULX3 412 aaKnown RBP15.78■□□□□ 0.12
UBA3-203ENST00000415609 PLPPR3Q6T4P5 718 aa15.78■□□□□ 0.12
UBA3-203ENST00000415609 ITPRIPQ8IWB1 547 aa15.78■□□□□ 0.12
UBA3-203ENST00000415609 EID1Q9Y6B2 187 aa15.78■□□□□ 0.12
UBA3-203ENST00000415609 TOPAZ1Q8N9V7 1692 aa15.78■□□□□ 0.12
UBA3-203ENST00000415609 KIF16BQ96L93 1317 aa15.78■□□□□ 0.12
UBA3-203ENST00000415609 CALD1Q05682 793 aaKnown RBP15.77■□□□□ 0.12
UBA3-203ENST00000415609 SLC26A8Q96RN1 970 aa15.77■□□□□ 0.12
UBA3-203ENST00000415609 NUTM2FA1L443 756 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms