RNA–Protein interactions for RNA: ENST00000415482.6

PTPN12-203, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5 BASIC

Gene PTPN12, Length 2,316 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-203ENST00000415482 CADPS2Q86UW7 1296 aa13.3□□□□□ -0.28
PTPN12-203ENST00000415482 ANKRD26Q9UPS8 1709 aa13.3□□□□□ -0.28
PTPN12-203ENST00000415482 MORC1Q86VD1 984 aa13.3□□□□□ -0.28
PTPN12-203ENST00000415482 TTC21BQ7Z4L5 1316 aa13.3□□□□□ -0.28
PTPN12-203ENST00000415482 NSD2O96028 1365 aa13.3□□□□□ -0.28
PTPN12-203ENST00000415482 PPP2R1AP30153 589 aa13.29□□□□□ -0.28
PTPN12-203ENST00000415482 TNNT2P45379 298 aaPredicted RBP13.29□□□□□ -0.28
PTPN12-203ENST00000415482 MRS2Q9HD23 443 aa13.29□□□□□ -0.28
PTPN12-203ENST00000415482 FOXO3O43524 673 aa13.28□□□□□ -0.28
PTPN12-203ENST00000415482 NLRP13Q86W25 1043 aa13.27□□□□□ -0.28
PTPN12-203ENST00000415482 KIF1AQ12756 1690 aa13.27□□□□□ -0.29
PTPN12-203ENST00000415482 XPCQ01831 940 aaPredicted RBP13.27□□□□□ -0.29
PTPN12-203ENST00000415482 DDX17Q92841 729 aaKnown RBP13.26□□□□□ -0.29
PTPN12-203ENST00000415482 BRD4O60885 1362 aaPredicted RBP13.26□□□□□ -0.29
PTPN12-203ENST00000415482 ILDR1Q86SU0 546 aaPredicted RBP13.25□□□□□ -0.29
PTPN12-203ENST00000415482 SLAIN2Q9P270 581 aa13.25□□□□□ -0.29
PTPN12-203ENST00000415482 PIK3C2AO00443 1686 aa13.25□□□□□ -0.29
PTPN12-203ENST00000415482 FBLN1P23142 703 aa13.25□□□□□ -0.29
PTPN12-203ENST00000415482 PSME1Q06323 249 aa13.25□□□□□ -0.29
PTPN12-203ENST00000415482 TTC21AQ8NDW8 1320 aa13.25□□□□□ -0.29
PTPN12-203ENST00000415482 BRINP3Q76B58 766 aa13.24□□□□□ -0.29
PTPN12-203ENST00000415482 PAK3O75914 559 aaPredicted RBP13.23□□□□□ -0.29
PTPN12-203ENST00000415482 TRPM3Q9HCF6 1732 aaPredicted RBP13.23□□□□□ -0.29
PTPN12-203ENST00000415482 OVOS2A0A0J9YW53 1432 aa13.23□□□□□ -0.29
PTPN12-203ENST00000415482 OVOS2Q6IE36 1432 aa13.23□□□□□ -0.29
PTPN12-203ENST00000415482 NUTM2GQ5VZR2 741 aa13.23□□□□□ -0.29
PTPN12-203ENST00000415482 COG3Q96JB2 828 aa13.23□□□□□ -0.29
PTPN12-203ENST00000415482 YTHDC1Q96MU7 727 aaKnown RBP13.23□□□□□ -0.29
PTPN12-203ENST00000415482 MARF1Q9Y4F3 1742 aaKnown RBP13.23□□□□□ -0.29
PTPN12-203ENST00000415482 KRT28Q7Z3Y7 464 aa13.22□□□□□ -0.29
PTPN12-203ENST00000415482 MTHFSP49914 203 aa13.21□□□□□ -0.29
PTPN12-203ENST00000415482 FAM9BQ8IZU0 186 aa13.21□□□□□ -0.29
PTPN12-203ENST00000415482 PNISRQ8TF01 805 aaKnown RBP13.21□□□□□ -0.29
PTPN12-203ENST00000415482 USP31Q70CQ4 1352 aa13.21□□□□□ -0.3
PTPN12-203ENST00000415482 ABTB2Q8N961 1025 aa13.21□□□□□ -0.3
PTPN12-203ENST00000415482 MAP2P11137 1827 aaKnown RBP13.2□□□□□ -0.3
PTPN12-203ENST00000415482 NLRP6P59044 892 aa13.2□□□□□ -0.3
PTPN12-203ENST00000415482 SCAF1Q9H7N4 1312 aaKnown RBP13.19□□□□□ -0.3
PTPN12-203ENST00000415482 PXDNQ92626 1479 aa13.19□□□□□ -0.3
PTPN12-203ENST00000415482 USP54Q70EL1 1684 aa13.19□□□□□ -0.3
PTPN12-203ENST00000415482 NPHP3Q7Z494 1330 aa13.19□□□□□ -0.3
PTPN12-203ENST00000415482 POLKQ9UBT6 870 aa13.18□□□□□ -0.3
PTPN12-203ENST00000415482 ALS2Q96Q42 1657 aa13.18□□□□□ -0.3
PTPN12-203ENST00000415482 SOX12O15370 315 aa13.18□□□□□ -0.3
PTPN12-203ENST00000415482 RRS1Q15050 365 aaKnown RBP13.18□□□□□ -0.3
PTPN12-203ENST00000415482 EMILIN1Q9Y6C2 1016 aa13.18□□□□□ -0.3
PTPN12-203ENST00000415482 AATKQ6ZMQ8 1374 aa13.17□□□□□ -0.3
PTPN12-203ENST00000415482 LMOD2Q6P5Q4 547 aa13.17□□□□□ -0.3
PTPN12-203ENST00000415482 ROBO1Q9Y6N7 1651 aa13.16□□□□□ -0.3
PTPN12-203ENST00000415482 NHSL1Q5SYE7 1610 aa13.16□□□□□ -0.3
PTPN12-203ENST00000415482 SHPRHQ149N8 1683 aa13.16□□□□□ -0.3
PTPN12-203ENST00000415482 SBNO1A3KN83 1393 aa13.16□□□□□ -0.3
PTPN12-203ENST00000415482 PPM1GO15355 546 aaPredicted RBP13.15□□□□□ -0.3
PTPN12-203ENST00000415482 PLEKHG5O94827 1062 aa13.15□□□□□ -0.3
PTPN12-203ENST00000415482 COL3A1P02461 1466 aaPredicted RBP13.15□□□□□ -0.3
PTPN12-203ENST00000415482 SOS2Q07890 1332 aaPredicted RBP13.14□□□□□ -0.31
PTPN12-203ENST00000415482 SMG6Q86US8 1419 aaKnown RBP13.14□□□□□ -0.31
PTPN12-203ENST00000415482 PEAK1Q9H792 1746 aa13.14□□□□□ -0.31
PTPN12-203ENST00000415482 TNS3Q68CZ2 1445 aa13.14□□□□□ -0.31
PTPN12-203ENST00000415482 PNPLA6Q8IY17 1366 aa13.13□□□□□ -0.31
PTPN12-203ENST00000415482 SPATA31A3Q5VYP0 1347 aa13.13□□□□□ -0.31
PTPN12-203ENST00000415482 ADAMTS8Q9UP79 889 aa13.13□□□□□ -0.31
PTPN12-203ENST00000415482 CFAP53Q96M91 514 aa13.13□□□□□ -0.31
PTPN12-203ENST00000415482 MED1Q15648 1581 aaPredicted RBP13.13□□□□□ -0.31
PTPN12-203ENST00000415482 NFAT5O94916 1531 aa13.13□□□□□ -0.31
PTPN12-203ENST00000415482 USP19O94966 1318 aa13.12□□□□□ -0.31
PTPN12-203ENST00000415482 MAP3K19Q56UN5 1328 aa13.12□□□□□ -0.31
PTPN12-203ENST00000415482 SLIT3O75094 1523 aa13.12□□□□□ -0.31
PTPN12-203ENST00000415482 CDK12Q9NYV4 1490 aaPredicted RBP13.12□□□□□ -0.31
PTPN12-203ENST00000415482 INSRP06213 1382 aa13.11□□□□□ -0.31
PTPN12-203ENST00000415482 SENP3-EIF4A1A0A087X0R7 540 aa13.11□□□□□ -0.31
PTPN12-203ENST00000415482 WDR43Q15061 677 aaKnown RBP eCLIP13.11□□□□□ -0.31
PTPN12-203ENST00000415482 CERKQ8TCT0 537 aa13.11□□□□□ -0.31
PTPN12-203ENST00000415482 TOM1O60784 492 aa13.11□□□□□ -0.31
PTPN12-203ENST00000415482 PIP4K2BP78356 416 aa13.11□□□□□ -0.31
PTPN12-203ENST00000415482 LTN1O94822 1766 aa13.1□□□□□ -0.31
PTPN12-203ENST00000415482 UBAP1LF5GYI3 381 aa13.1□□□□□ -0.31
PTPN12-203ENST00000415482 GCP02774 474 aa13.1□□□□□ -0.31
PTPN12-203ENST00000415482 CABLES1Q8TDN4 633 aa13.1□□□□□ -0.31
PTPN12-203ENST00000415482 CRYBG1Q9Y4K1 1723 aa13.1□□□□□ -0.31
PTPN12-203ENST00000415482 AHDC1Q5TGY3 1603 aaPredicted RBP13.1□□□□□ -0.31
PTPN12-203ENST00000415482 HNRNPUQ00839 825 aaKnown RBP eCLIP13.1□□□□□ -0.31
PTPN12-203ENST00000415482 IQSEC2Q5JU85 1478 aa13.09□□□□□ -0.31
PTPN12-203ENST00000415482 DIAPH1O60610 1272 aaKnown RBP13.09□□□□□ -0.31
PTPN12-203ENST00000415482 HSP90AB2PQ58FF8 381 aa13.09□□□□□ -0.31
PTPN12-203ENST00000415482 ARHGEF10O15013 1369 aa13.09□□□□□ -0.31
PTPN12-203ENST00000415482 PHRF1Q9P1Y6 1649 aaKnown RBP13.09□□□□□ -0.31
PTPN12-203ENST00000415482 BLMP54132 1417 aaPredicted RBP13.08□□□□□ -0.32
PTPN12-203ENST00000415482 KCNH5Q8NCM2 988 aa13.08□□□□□ -0.32
PTPN12-203ENST00000415482 IL13P35225 146 aa13.07□□□□□ -0.32
PTPN12-203ENST00000415482 FLT4P35916 1363 aa13.07□□□□□ -0.32
PTPN12-203ENST00000415482 U2SURPO15042 1029 aaKnown RBP13.07□□□□□ -0.32
PTPN12-203ENST00000415482 AMPHP49418 695 aa13.07□□□□□ -0.32
PTPN12-203ENST00000415482 CCDC146Q8IYE0 955 aa13.07□□□□□ -0.32
PTPN12-203ENST00000415482 PHLPP1O60346 1717 aa13.06□□□□□ -0.32
PTPN12-203ENST00000415482 ZBTB7CA1YPR0 619 aa13.06□□□□□ -0.32
PTPN12-203ENST00000415482 U2AF1L5P0DN76 240 aaPredicted RBP13.06□□□□□ -0.32
PTPN12-203ENST00000415482 HOXC9P31274 260 aa13.06□□□□□ -0.32
PTPN12-203ENST00000415482 U2AF1Q01081 240 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTPN12-203ENST00000415482 EIF4A2Q14240 407 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms