RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 TXNDC2Q86VQ3 553 aa21.33■■□□□ 1
HCG18-233ENST00000412685 IPO9Q96P70 1041 aaKnown RBP21.33■■□□□ 1
HCG18-233ENST00000412685 NOP58Q9Y2X3 529 aaKnown RBP21.33■■□□□ 1
HCG18-233ENST00000412685 DIAPH1O60610 1272 aaKnown RBP21.32■■□□□ 1
HCG18-233ENST00000412685 MAPK8IP3Q9UPT6 1336 aa21.31■■□□□ 1
HCG18-233ENST00000412685 TMPOP42166 694 aaKnown RBP21.31■■□□□ 1
HCG18-233ENST00000412685 TECPR2O15040 1411 aa21.31■■□□□ 1
HCG18-233ENST00000412685 FAM135BQ49AJ0 1406 aa21.31■■□□□ 1
HCG18-233ENST00000412685 TMEM2Q9UHN6 1383 aa21.3■■□□□ 1
HCG18-233ENST00000412685 PPIP5K1Q6PFW1 1433 aa21.3■■□□□ 1
HCG18-233ENST00000412685 KNDC1Q76NI1 1749 aa21.3■■□□□ 1
HCG18-233ENST00000412685 PANK1Q8TE04 598 aa21.3■■□□□ 1
HCG18-233ENST00000412685 FRAT1Q92837 279 aaPredicted RBP21.3■■□□□ 1
HCG18-233ENST00000412685 CPSF1Q10570 1443 aaKnown RBP21.29■■□□□ 1
HCG18-233ENST00000412685 SIRT1Q96EB6 747 aa21.29■■□□□ 1
HCG18-233ENST00000412685 UBR1Q8IWV7 1749 aa21.29■■□□□ 1
HCG18-233ENST00000412685 EDC4Q6P2E9 1401 aaKnown RBP21.28■■□□□ 1
HCG18-233ENST00000412685 COG6Q9Y2V7 657 aa21.28■■□□□ 1
HCG18-233ENST00000412685 TRIM35Q9UPQ4 493 aa21.27■■□□□ 1
HCG18-233ENST00000412685 CPS1P31327 1500 aa21.27■□□□□ 0.99
HCG18-233ENST00000412685 POLKQ9UBT6 870 aa21.26■□□□□ 0.99
HCG18-233ENST00000412685 PAK3O75914 559 aaPredicted RBP21.26■□□□□ 0.99
HCG18-233ENST00000412685 NUDT16Q96DE0 195 aaKnown RBP21.26■□□□□ 0.99
HCG18-233ENST00000412685 PNNQ9H307 717 aaKnown RBP21.26■□□□□ 0.99
HCG18-233ENST00000412685 NPM2Q86SE8 214 aaKnown RBP21.25■□□□□ 0.99
HCG18-233ENST00000412685 CLUAP1Q96AJ1 413 aa21.25■□□□□ 0.99
HCG18-233ENST00000412685 BCL2L13Q9BXK5 485 aa21.25■□□□□ 0.99
HCG18-233ENST00000412685 CDC42BPGQ6DT37 1551 aa21.25■□□□□ 0.99
HCG18-233ENST00000412685 FBLN1P23142 703 aa21.24■□□□□ 0.99
HCG18-233ENST00000412685 PPM1GO15355 546 aaPredicted RBP21.24■□□□□ 0.99
HCG18-233ENST00000412685 TSR2Q969E8 191 aaKnown RBP21.24■□□□□ 0.99
HCG18-233ENST00000412685 CCDC61Q9Y6R9 512 aa21.24■□□□□ 0.99
HCG18-233ENST00000412685 FCHSD2O94868 740 aa21.23■□□□□ 0.99
HCG18-233ENST00000412685 CT47B1P0C2W7 299 aaPredicted RBP21.23■□□□□ 0.99
HCG18-233ENST00000412685 RIPK4P57078 832 aa21.22■□□□□ 0.99
HCG18-233ENST00000412685 NME9Q86XW9 330 aa21.22■□□□□ 0.99
HCG18-233ENST00000412685 ADAMTS13Q76LX8 1427 aa21.22■□□□□ 0.99
HCG18-233ENST00000412685 IGHDP01880 384 aa21.22■□□□□ 0.99
HCG18-233ENST00000412685 ZBTB47Q9UFB7 747 aaPredicted RBP21.22■□□□□ 0.99
HCG18-233ENST00000412685 IL16Q14005 1332 aa21.22■□□□□ 0.99
HCG18-233ENST00000412685 RLBP1P12271 317 aa21.21■□□□□ 0.99
HCG18-233ENST00000412685 NCKAP5LQ9HCH0 1330 aa21.21■□□□□ 0.99
HCG18-233ENST00000412685 LRRC7Q96NW7 1537 aa21.21■□□□□ 0.99
HCG18-233ENST00000412685 ROBO2Q9HCK4 1378 aa21.21■□□□□ 0.99
HCG18-233ENST00000412685 MAP2P11137 1827 aaKnown RBP21.21■□□□□ 0.99
HCG18-233ENST00000412685 AAMPQ13685 434 aa21.2■□□□□ 0.98
HCG18-233ENST00000412685 TNNQ9UQP3 1299 aa21.2■□□□□ 0.98
HCG18-233ENST00000412685 EXOSC9Q06265 439 aaKnown RBP21.19■□□□□ 0.98
HCG18-233ENST00000412685 RSPH6AQ9H0K4 717 aa21.19■□□□□ 0.98
HCG18-233ENST00000412685 MON2Q7Z3U7 1717 aa21.19■□□□□ 0.98
HCG18-233ENST00000412685 PLEKHG1Q9ULL1 1385 aa21.19■□□□□ 0.98
HCG18-233ENST00000412685 LTKP29376 864 aa21.18■□□□□ 0.98
HCG18-233ENST00000412685 RGS3P49796 1198 aa21.18■□□□□ 0.98
HCG18-233ENST00000412685 ZRANB1Q9UGI0 708 aa21.18■□□□□ 0.98
HCG18-233ENST00000412685 EMILIN1Q9Y6C2 1016 aa21.18■□□□□ 0.98
HCG18-233ENST00000412685 PRR36Q9H6K5 1346 aa21.18■□□□□ 0.98
HCG18-233ENST00000412685 PRKAR2BP31323 418 aa21.18■□□□□ 0.98
HCG18-233ENST00000412685 AATKQ6ZMQ8 1374 aa21.17■□□□□ 0.98
HCG18-233ENST00000412685 CEBPAP49715 358 aaPredicted RBP21.17■□□□□ 0.98
HCG18-233ENST00000412685 FAM161AQ3B820 660 aa21.16■□□□□ 0.98
HCG18-233ENST00000412685 COG3Q96JB2 828 aa21.16■□□□□ 0.98
HCG18-233ENST00000412685 CDK12Q9NYV4 1490 aaPredicted RBP21.16■□□□□ 0.98
HCG18-233ENST00000412685 ZKSCAN2Q63HK3 967 aa21.16■□□□□ 0.98
HCG18-233ENST00000412685 AKAP12Q02952 1782 aa21.16■□□□□ 0.98
HCG18-233ENST00000412685 NEFMP07197 916 aa21.15■□□□□ 0.98
HCG18-233ENST00000412685 ZNF692Q9BU19 519 aaPredicted RBP21.15■□□□□ 0.98
HCG18-233ENST00000412685 ITSN1Q15811 1721 aa21.15■□□□□ 0.98
HCG18-233ENST00000412685 C8orf34Q49A92 452 aa21.14■□□□□ 0.98
HCG18-233ENST00000412685 SMC4Q9NTJ3 1288 aa21.14■□□□□ 0.98
HCG18-233ENST00000412685 C3P01024 1663 aa21.14■□□□□ 0.97
HCG18-233ENST00000412685 IL13P35225 146 aa21.13■□□□□ 0.97
HCG18-233ENST00000412685 HMOX1P09601 288 aa21.13■□□□□ 0.97
HCG18-233ENST00000412685 PMFBP1Q8TBY8 1022 aa21.13■□□□□ 0.97
HCG18-233ENST00000412685 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.12■□□□□ 0.97
HCG18-233ENST00000412685 SSH1Q8WYL5 1049 aa21.12■□□□□ 0.97
HCG18-233ENST00000412685 PCDHB15Q9Y5E8 787 aa21.12■□□□□ 0.97
HCG18-233ENST00000412685 MVPQ14764 893 aaKnown RBP21.12■□□□□ 0.97
HCG18-233ENST00000412685 FTSJ3Q8IY81 847 aaKnown RBP21.11■□□□□ 0.97
HCG18-233ENST00000412685 DZIP1LQ8IYY4 767 aaKnown RBP21.11■□□□□ 0.97
HCG18-233ENST00000412685 PHACTR3Q96KR7 559 aa21.11■□□□□ 0.97
HCG18-233ENST00000412685 EID1Q9Y6B2 187 aa21.11■□□□□ 0.97
HCG18-233ENST00000412685 NFE2L2Q16236 605 aa21.11■□□□□ 0.97
HCG18-233ENST00000412685 SLC26A8Q96RN1 970 aa21.11■□□□□ 0.97
HCG18-233ENST00000412685 RRS1Q15050 365 aaKnown RBP21.1■□□□□ 0.97
HCG18-233ENST00000412685 PTPRUQ92729 1446 aa21.09■□□□□ 0.97
HCG18-233ENST00000412685 TRIM27P14373 513 aa21.08■□□□□ 0.97
HCG18-233ENST00000412685 SLIT1O75093 1534 aa21.08■□□□□ 0.97
HCG18-233ENST00000412685 TOPAZ1Q8N9V7 1692 aa21.08■□□□□ 0.96
HCG18-233ENST00000412685 ARHGAP23Q9P227 1491 aa21.07■□□□□ 0.96
HCG18-233ENST00000412685 ACEP12821 1306 aa21.07■□□□□ 0.96
HCG18-233ENST00000412685 TTC21BQ7Z4L5 1316 aa21.06■□□□□ 0.96
HCG18-233ENST00000412685 PLEKHG3A1L390 1219 aa21.06■□□□□ 0.96
HCG18-233ENST00000412685 ATF7IPQ6VMQ6 1270 aa21.06■□□□□ 0.96
HCG18-233ENST00000412685 NRKQ7Z2Y5 1582 aa21.06■□□□□ 0.96
HCG18-233ENST00000412685 NUTM2FA1L443 756 aa21.05■□□□□ 0.96
HCG18-233ENST00000412685 DDRGK1Q96HY6 314 aa21.05■□□□□ 0.96
HCG18-233ENST00000412685 NOB1Q9ULX3 412 aaKnown RBP21.05■□□□□ 0.96
HCG18-233ENST00000412685 PLPPR3Q6T4P5 718 aa21.05■□□□□ 0.96
HCG18-233ENST00000412685 RWDD1Q9H446 243 aaPredicted RBP21.05■□□□□ 0.96
HCG18-233ENST00000412685 CALD1Q05682 793 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms