RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 SBNO1A3KN83 1393 aa27.59■■■□□ 2.01
PTPA-208ENST00000411917 USP31Q70CQ4 1352 aa27.58■■■□□ 2.01
PTPA-208ENST00000411917 USP54Q70EL1 1684 aa27.57■■■□□ 2
PTPA-208ENST00000411917 FYB1O15117 783 aa27.56■■■□□ 2
PTPA-208ENST00000411917 PSME1Q06323 249 aa27.56■■■□□ 2
PTPA-208ENST00000411917 PXDNQ92626 1479 aa27.56■■■□□ 2
PTPA-208ENST00000411917 SCAF1Q9H7N4 1312 aaKnown RBP27.55■■■□□ 2
PTPA-208ENST00000411917 NHSL1Q5SYE7 1610 aa27.55■■■□□ 2
PTPA-208ENST00000411917 FOXO3O43524 673 aa27.54■■■□□ 2
PTPA-208ENST00000411917 TRPM3Q9HCF6 1732 aaPredicted RBP27.54■■■□□ 2
PTPA-208ENST00000411917 ANKRD26Q9UPS8 1709 aa27.54■■■□□ 2
PTPA-208ENST00000411917 KIF20BQ96Q89 1820 aa27.53■■■□□ 2
PTPA-208ENST00000411917 AHDC1Q5TGY3 1603 aaPredicted RBP27.53■■■□□ 2
PTPA-208ENST00000411917 OVOS2A0A0J9YW53 1432 aa27.52■■■□□ 2
PTPA-208ENST00000411917 OVOS2Q6IE36 1432 aa27.52■■■□□ 2
PTPA-208ENST00000411917 SOS2Q07890 1332 aaPredicted RBP27.52■■■□□ 2
PTPA-208ENST00000411917 KRT28Q7Z3Y7 464 aa27.5■■□□□ 1.99
PTPA-208ENST00000411917 ROBO1Q9Y6N7 1651 aa27.49■■□□□ 1.99
PTPA-208ENST00000411917 PIK3C2AO00443 1686 aa27.48■■□□□ 1.99
PTPA-208ENST00000411917 CC2D1BQ5T0F9 858 aaKnown RBP27.47■■□□□ 1.99
PTPA-208ENST00000411917 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.47■■□□□ 1.99
PTPA-208ENST00000411917 TNS3Q68CZ2 1445 aa27.47■■□□□ 1.99
PTPA-208ENST00000411917 MYBBP1AQ9BQG0 1328 aaKnown RBP27.46■■□□□ 1.99
PTPA-208ENST00000411917 CCER2I3L3R5 266 aa27.46■■□□□ 1.99
PTPA-208ENST00000411917 ARHGEF10O15013 1369 aa27.46■■□□□ 1.99
PTPA-208ENST00000411917 AATKQ6ZMQ8 1374 aa27.46■■□□□ 1.99
PTPA-208ENST00000411917 ALS2Q96Q42 1657 aa27.46■■□□□ 1.99
PTPA-208ENST00000411917 COG3Q96JB2 828 aa27.45■■□□□ 1.98
PTPA-208ENST00000411917 MORC1Q86VD1 984 aa27.44■■□□□ 1.98
PTPA-208ENST00000411917 NME9Q86XW9 330 aa27.44■■□□□ 1.98
PTPA-208ENST00000411917 SPATA31A3Q5VYP0 1347 aa27.43■■□□□ 1.98
PTPA-208ENST00000411917 GGNBP2Q9H3C7 697 aa27.43■■□□□ 1.98
PTPA-208ENST00000411917 MED1Q15648 1581 aaPredicted RBP27.43■■□□□ 1.98
PTPA-208ENST00000411917 UBAP1LF5GYI3 381 aa27.42■■□□□ 1.98
PTPA-208ENST00000411917 NLRP13Q86W25 1043 aa27.41■■□□□ 1.98
PTPA-208ENST00000411917 MIER1Q8N108 512 aa27.41■■□□□ 1.98
PTPA-208ENST00000411917 USP19O94966 1318 aa27.41■■□□□ 1.98
PTPA-208ENST00000411917 ABTB2Q8N961 1025 aa27.4■■□□□ 1.98
PTPA-208ENST00000411917 SLIT3O75094 1523 aa27.39■■□□□ 1.98
PTPA-208ENST00000411917 PAK3O75914 559 aaPredicted RBP27.38■■□□□ 1.97
PTPA-208ENST00000411917 SMG6Q86US8 1419 aaKnown RBP27.38■■□□□ 1.97
PTPA-208ENST00000411917 PPP2R1AP30153 589 aa27.37■■□□□ 1.97
PTPA-208ENST00000411917 NLRP6P59044 892 aa27.37■■□□□ 1.97
PTPA-208ENST00000411917 MARF1Q9Y4F3 1742 aaKnown RBP27.37■■□□□ 1.97
PTPA-208ENST00000411917 KIF24Q5T7B8 1368 aa27.35■■□□□ 1.97
PTPA-208ENST00000411917 KCNH5Q8NCM2 988 aa27.35■■□□□ 1.97
PTPA-208ENST00000411917 LRRC59Q96AG4 307 aaKnown RBP27.35■■□□□ 1.97
PTPA-208ENST00000411917 DDX17Q92841 729 aaKnown RBP27.34■■□□□ 1.97
PTPA-208ENST00000411917 XPCQ01831 940 aaPredicted RBP27.33■■□□□ 1.97
PTPA-208ENST00000411917 INSRP06213 1382 aa27.33■■□□□ 1.97
PTPA-208ENST00000411917 COL16A1Q07092 1604 aaPredicted RBP27.32■■□□□ 1.96
PTPA-208ENST00000411917 ZRANB1Q9UGI0 708 aa27.31■■□□□ 1.96
PTPA-208ENST00000411917 NFAT5O94916 1531 aa27.31■■□□□ 1.96
PTPA-208ENST00000411917 PNPLA6Q8IY17 1366 aa27.3■■□□□ 1.96
PTPA-208ENST00000411917 COL22A1Q8NFW1 1626 aaPredicted RBP27.29■■□□□ 1.96
PTPA-208ENST00000411917 PHLPP1O60346 1717 aa27.28■■□□□ 1.96
PTPA-208ENST00000411917 CRYBG1Q9Y4K1 1723 aa27.27■■□□□ 1.96
PTPA-208ENST00000411917 PHRF1Q9P1Y6 1649 aaKnown RBP27.27■■□□□ 1.96
PTPA-208ENST00000411917 ABCC6O95255 1503 aa27.26■■□□□ 1.96
PTPA-208ENST00000411917 CDK12Q9NYV4 1490 aaPredicted RBP27.26■■□□□ 1.95
PTPA-208ENST00000411917 RTL1A6NKG5 1358 aa27.26■■□□□ 1.95
PTPA-208ENST00000411917 PIP4K2BP78356 416 aa27.26■■□□□ 1.95
PTPA-208ENST00000411917 POLKQ9UBT6 870 aa27.25■■□□□ 1.95
PTPA-208ENST00000411917 GCP02774 474 aa27.24■■□□□ 1.95
PTPA-208ENST00000411917 CPDO75976 1380 aa27.23■■□□□ 1.95
PTPA-208ENST00000411917 MTHFSP49914 203 aa27.22■■□□□ 1.95
PTPA-208ENST00000411917 CNGB1Q14028 1251 aaPredicted RBP27.21■■□□□ 1.95
PTPA-208ENST00000411917 CFAP53Q96M91 514 aa27.21■■□□□ 1.95
PTPA-208ENST00000411917 LMOD2Q6P5Q4 547 aa27.2■■□□□ 1.94
PTPA-208ENST00000411917 FLT4P35916 1363 aa27.2■■□□□ 1.94
PTPA-208ENST00000411917 TNNT2P45379 298 aaPredicted RBP27.19■■□□□ 1.94
PTPA-208ENST00000411917 NUTM2GQ5VZR2 741 aa27.19■■□□□ 1.94
PTPA-208ENST00000411917 ARHGEF25Q86VW2 580 aa27.19■■□□□ 1.94
PTPA-208ENST00000411917 MRS2Q9HD23 443 aa27.19■■□□□ 1.94
PTPA-208ENST00000411917 COL3A1P02461 1466 aaPredicted RBP27.19■■□□□ 1.94
PTPA-208ENST00000411917 MAP3K19Q56UN5 1328 aa27.18■■□□□ 1.94
PTPA-208ENST00000411917 SHPRHQ149N8 1683 aa27.17■■□□□ 1.94
PTPA-208ENST00000411917 ABCA3Q99758 1704 aa27.17■■□□□ 1.94
PTPA-208ENST00000411917 MAP2P11137 1827 aaKnown RBP27.17■■□□□ 1.94
PTPA-208ENST00000411917 JCADQ9P266 1359 aa27.16■■□□□ 1.94
PTPA-208ENST00000411917 EMILIN1Q9Y6C2 1016 aa27.15■■□□□ 1.94
PTPA-208ENST00000411917 BLMP54132 1417 aaPredicted RBP27.14■■□□□ 1.93
PTPA-208ENST00000411917 RRS1Q15050 365 aaKnown RBP27.13■■□□□ 1.93
PTPA-208ENST00000411917 PNISRQ8TF01 805 aaKnown RBP27.13■■□□□ 1.93
PTPA-208ENST00000411917 CCDC184Q52MB2 194 aa27.12■■□□□ 1.93
PTPA-208ENST00000411917 IP6K1Q92551 441 aa27.12■■□□□ 1.93
PTPA-208ENST00000411917 PEAK1Q9H792 1746 aa27.12■■□□□ 1.93
PTPA-208ENST00000411917 HOXC9P31274 260 aa27.1■■□□□ 1.93
PTPA-208ENST00000411917 FBLN1P23142 703 aa27.09■■□□□ 1.93
PTPA-208ENST00000411917 SPATA31A6Q5VVP1 1343 aa27.09■■□□□ 1.93
PTPA-208ENST00000411917 LTN1O94822 1766 aa27.09■■□□□ 1.93
PTPA-208ENST00000411917 AMPHP49418 695 aa27.08■■□□□ 1.93
PTPA-208ENST00000411917 DIAPH1O60610 1272 aaKnown RBP27.07■■□□□ 1.92
PTPA-208ENST00000411917 NUDCQ9Y266 331 aa27.07■■□□□ 1.92
PTPA-208ENST00000411917 COL18A1P39060 1754 aa27.05■■□□□ 1.92
PTPA-208ENST00000411917 IL13P35225 146 aa27.05■■□□□ 1.92
PTPA-208ENST00000411917 CABLES1Q8TDN4 633 aa27.05■■□□□ 1.92
PTPA-208ENST00000411917 KIAA0232Q92628 1395 aa27.05■■□□□ 1.92
PTPA-208ENST00000411917 SOX12O15370 315 aa27.04■■□□□ 1.92
PTPA-208ENST00000411917 HSPA1LP34931 641 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms