RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 RICTORQ6R327 1708 aa21.26■□□□□ 0.99
LIMS2-208ENST00000410011 SRPK2P78362 688 aaKnown RBP21.24■□□□□ 0.99
LIMS2-208ENST00000410011 NUTM2DQ5VT03 806 aaPredicted RBP21.24■□□□□ 0.99
LIMS2-208ENST00000410011 FTSJ3Q8IY81 847 aaKnown RBP21.24■□□□□ 0.99
LIMS2-208ENST00000410011 DDX19BQ9UMR2 479 aa21.24■□□□□ 0.99
LIMS2-208ENST00000410011 YTHDC2Q9H6S0 1430 aaKnown RBP21.23■□□□□ 0.99
LIMS2-208ENST00000410011 EXOSC9Q06265 439 aaKnown RBP21.22■□□□□ 0.99
LIMS2-208ENST00000410011 PREX1Q8TCU6 1659 aa21.22■□□□□ 0.99
LIMS2-208ENST00000410011 ATF7IPQ6VMQ6 1270 aa21.22■□□□□ 0.99
LIMS2-208ENST00000410011 GGNBP2Q9H3C7 697 aa21.22■□□□□ 0.99
LIMS2-208ENST00000410011 SMC4Q9NTJ3 1288 aa21.21■□□□□ 0.99
LIMS2-208ENST00000410011 CDC42BPGQ6DT37 1551 aa21.21■□□□□ 0.99
LIMS2-208ENST00000410011 TRIM27P14373 513 aa21.21■□□□□ 0.99
LIMS2-208ENST00000410011 IL27Q8NEV9 243 aa21.21■□□□□ 0.99
LIMS2-208ENST00000410011 U2SURPO15042 1029 aaKnown RBP21.2■□□□□ 0.98
LIMS2-208ENST00000410011 SSH1Q8WYL5 1049 aa21.2■□□□□ 0.98
LIMS2-208ENST00000410011 TSR2Q969E8 191 aaKnown RBP21.2■□□□□ 0.98
LIMS2-208ENST00000410011 ANTXR1Q9H6X2 564 aa21.2■□□□□ 0.98
LIMS2-208ENST00000410011 ZNF428Q96B54 188 aa21.2■□□□□ 0.98
LIMS2-208ENST00000410011 ARHGEF40Q8TER5 1519 aa21.19■□□□□ 0.98
LIMS2-208ENST00000410011 DIAPH1O60610 1272 aaKnown RBP21.19■□□□□ 0.98
LIMS2-208ENST00000410011 BRPF1P55201 1214 aaPredicted RBP21.19■□□□□ 0.98
LIMS2-208ENST00000410011 HDGFL2Q7Z4V5 671 aaPredicted RBP21.19■□□□□ 0.98
LIMS2-208ENST00000410011 PRAM1Q96QH2 718 aa21.19■□□□□ 0.98
LIMS2-208ENST00000410011 FCHSD2O94868 740 aa21.18■□□□□ 0.98
LIMS2-208ENST00000410011 ALDH1L2Q3SY69 923 aa21.18■□□□□ 0.98
LIMS2-208ENST00000410011 STK26Q9P289 416 aa21.18■□□□□ 0.98
LIMS2-208ENST00000410011 MYO5BQ9ULV0 1848 aa21.18■□□□□ 0.98
LIMS2-208ENST00000410011 SAFB2Q14151 953 aaKnown RBP eCLIP21.18■□□□□ 0.98
LIMS2-208ENST00000410011 SMC5Q8IY18 1101 aa21.18■□□□□ 0.98
LIMS2-208ENST00000410011 KIF16BQ96L93 1317 aa21.18■□□□□ 0.98
LIMS2-208ENST00000410011 IPO8O15397 1037 aaKnown RBP21.17■□□□□ 0.98
LIMS2-208ENST00000410011 POGKQ9P215 609 aa21.17■□□□□ 0.98
LIMS2-208ENST00000410011 RIPK4P57078 832 aa21.16■□□□□ 0.98
LIMS2-208ENST00000410011 ALKQ9UM73 1620 aa21.16■□□□□ 0.98
LIMS2-208ENST00000410011 PPIP5K1Q6PFW1 1433 aa21.16■□□□□ 0.98
LIMS2-208ENST00000410011 YEATS2Q9ULM3 1422 aa21.16■□□□□ 0.98
LIMS2-208ENST00000410011 ZBTB40Q9NUA8 1239 aa21.15■□□□□ 0.98
LIMS2-208ENST00000410011 DLC1Q96QB1 1528 aa21.15■□□□□ 0.98
LIMS2-208ENST00000410011 MINK1Q8N4C8 1332 aaPredicted RBP21.14■□□□□ 0.98
LIMS2-208ENST00000410011 TBC1D2Q9BYX2 928 aa21.14■□□□□ 0.97
LIMS2-208ENST00000410011 NOB1Q9ULX3 412 aaKnown RBP21.14■□□□□ 0.97
LIMS2-208ENST00000410011 CDK19Q9BWU1 502 aa21.13■□□□□ 0.97
LIMS2-208ENST00000410011 PPP6R1Q9UPN7 881 aa21.13■□□□□ 0.97
LIMS2-208ENST00000410011 KIF20BQ96Q89 1820 aa21.13■□□□□ 0.97
LIMS2-208ENST00000410011 ITPRIPQ8IWB1 547 aa21.12■□□□□ 0.97
LIMS2-208ENST00000410011 ATP7BP35670 1465 aa21.12■□□□□ 0.97
LIMS2-208ENST00000410011 FAM135BQ49AJ0 1406 aa21.11■□□□□ 0.97
LIMS2-208ENST00000410011 TMEM57Q8N5G2 664 aa21.1■□□□□ 0.97
LIMS2-208ENST00000410011 CABP1Q9NZU7 370 aa21.1■□□□□ 0.97
LIMS2-208ENST00000410011 RSPH6AQ9H0K4 717 aa21.09■□□□□ 0.97
LIMS2-208ENST00000410011 CHMP4BQ9H444 224 aaKnown RBP21.09■□□□□ 0.97
LIMS2-208ENST00000410011 C22orf23Q9BZE7 217 aa21.09■□□□□ 0.97
LIMS2-208ENST00000410011 ARHGAP45Q92619 1136 aa21.08■□□□□ 0.97
LIMS2-208ENST00000410011 CALD1Q05682 793 aaKnown RBP21.07■□□□□ 0.96
LIMS2-208ENST00000410011 BRPF3Q9ULD4 1205 aa21.07■□□□□ 0.96
LIMS2-208ENST00000410011 SLKQ9H2G2 1235 aaPredicted RBP21.07■□□□□ 0.96
LIMS2-208ENST00000410011 POLKQ9UBT6 870 aa21.07■□□□□ 0.96
LIMS2-208ENST00000410011 LRRC7Q96NW7 1537 aa21.07■□□□□ 0.96
LIMS2-208ENST00000410011 REREQ9P2R6 1566 aa21.06■□□□□ 0.96
LIMS2-208ENST00000410011 NUCB1Q02818 461 aa21.06■□□□□ 0.96
LIMS2-208ENST00000410011 PIK3R4Q99570 1358 aa21.05■□□□□ 0.96
LIMS2-208ENST00000410011 AGLP35573 1532 aa21.04■□□□□ 0.96
LIMS2-208ENST00000410011 FBXO31Q5XUX0 539 aaPredicted RBP21.04■□□□□ 0.96
LIMS2-208ENST00000410011 NFE2L2Q16236 605 aa21.03■□□□□ 0.96
LIMS2-208ENST00000410011 PRKAR2BP31323 418 aa21.03■□□□□ 0.96
LIMS2-208ENST00000410011 CPSF1Q10570 1443 aaKnown RBP21.02■□□□□ 0.96
LIMS2-208ENST00000410011 AATKQ6ZMQ8 1374 aa21.02■□□□□ 0.96
LIMS2-208ENST00000410011 RBM25P49756 843 aaKnown RBP21.02■□□□□ 0.96
LIMS2-208ENST00000410011 PTCH1Q13635 1447 aa21.01■□□□□ 0.95
LIMS2-208ENST00000410011 A2ML1A8K2U0 1454 aa21.01■□□□□ 0.95
LIMS2-208ENST00000410011 IFT57Q9NWB7 429 aa21.01■□□□□ 0.95
LIMS2-208ENST00000410011 EDC4Q6P2E9 1401 aaKnown RBP21.01■□□□□ 0.95
LIMS2-208ENST00000410011 SETD1AO15047 1707 aaKnown RBP21■□□□□ 0.95
LIMS2-208ENST00000410011 VAMP4O75379 141 aa21■□□□□ 0.95
LIMS2-208ENST00000410011 GCC1Q96CN9 775 aa21■□□□□ 0.95
LIMS2-208ENST00000410011 CHMP5Q9NZZ3 219 aa21■□□□□ 0.95
LIMS2-208ENST00000410011 ZBTB7BO15156 539 aaPredicted RBP21■□□□□ 0.95
LIMS2-208ENST00000410011 ZNF853P0CG23 659 aa21■□□□□ 0.95
LIMS2-208ENST00000410011 GNAI1P63096 354 aa21■□□□□ 0.95
LIMS2-208ENST00000410011 CHD1LQ86WJ1 897 aa21■□□□□ 0.95
LIMS2-208ENST00000410011 SPATA31D1Q6ZQQ2 1576 aa20.99■□□□□ 0.95
LIMS2-208ENST00000410011 MFAP1P55081 439 aaKnown RBP20.99■□□□□ 0.95
LIMS2-208ENST00000410011 STAG3Q9UJ98 1225 aa20.99■□□□□ 0.95
LIMS2-208ENST00000410011 CDK12Q9NYV4 1490 aaPredicted RBP20.99■□□□□ 0.95
LIMS2-208ENST00000410011 BMP2KLQ5H9B9 411 aa20.99■□□□□ 0.95
LIMS2-208ENST00000410011 L1TD1Q5T7N2 865 aaKnown RBP20.99■□□□□ 0.95
LIMS2-208ENST00000410011 MRPL50Q8N5N7 158 aaKnown RBP20.99■□□□□ 0.95
LIMS2-208ENST00000410011 SNX21Q969T3 373 aa20.99■□□□□ 0.95
LIMS2-208ENST00000410011 IL13P35225 146 aa20.98■□□□□ 0.95
LIMS2-208ENST00000410011 MAP2P11137 1827 aaKnown RBP20.97■□□□□ 0.95
LIMS2-208ENST00000410011 SIRT1Q96EB6 747 aa20.97■□□□□ 0.95
LIMS2-208ENST00000410011 MCM4P33991 863 aa20.96■□□□□ 0.95
LIMS2-208ENST00000410011 RIMBP3CA6NJZ7 1639 aa20.96■□□□□ 0.95
LIMS2-208ENST00000410011 RIMBP3BA6NNM3 1639 aa20.96■□□□□ 0.95
LIMS2-208ENST00000410011 RIMBP3Q9UFD9 1639 aa20.96■□□□□ 0.95
LIMS2-208ENST00000410011 RIMS2Q9UQ26 1411 aa20.96■□□□□ 0.95
LIMS2-208ENST00000410011 NCOA3Q9Y6Q9 1424 aa20.96■□□□□ 0.95
LIMS2-208ENST00000410011 LMOD3Q0VAK6 560 aa20.96■□□□□ 0.95
LIMS2-208ENST00000410011 PHACTR3Q96KR7 559 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms