RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 CCDC27Q2M243 656 aa15.45■□□□□ 0.06
RNF43-201ENST00000407977 KIAA0754O94854 1291 aa15.45■□□□□ 0.06
RNF43-201ENST00000407977 PPP2R1AP30153 589 aa15.45■□□□□ 0.06
RNF43-201ENST00000407977 NUTM2FA1L443 756 aa15.44■□□□□ 0.06
RNF43-201ENST00000407977 CBFA2T2O43439 604 aa15.44■□□□□ 0.06
RNF43-201ENST00000407977 ODF2Q5BJF6 829 aa15.44■□□□□ 0.06
RNF43-201ENST00000407977 LUC7LQ9NQ29 371 aaKnown RBP15.44■□□□□ 0.06
RNF43-201ENST00000407977 TNMDQ9H2S6 317 aa15.44■□□□□ 0.06
RNF43-201ENST00000407977 KIF2AO00139 706 aaPredicted RBP15.44■□□□□ 0.06
RNF43-201ENST00000407977 STK38Q15208 465 aa15.44■□□□□ 0.06
RNF43-201ENST00000407977 CCDC30Q5VVM6 783 aa15.44■□□□□ 0.06
RNF43-201ENST00000407977 TRIM34Q9BYJ4 488 aa15.44■□□□□ 0.06
RNF43-201ENST00000407977 ZNHIT6Q9NWK9 470 aaKnown RBP15.44■□□□□ 0.06
RNF43-201ENST00000407977 VPS37DQ86XT2 251 aa15.43■□□□□ 0.06
RNF43-201ENST00000407977 MAGEC2Q9UBF1 373 aaPredicted RBP15.43■□□□□ 0.06
RNF43-201ENST00000407977 ERLIN2O94905 339 aa15.43■□□□□ 0.06
RNF43-201ENST00000407977 GOLGA6L7A0A1B0GV03 622 aa15.43■□□□□ 0.06
RNF43-201ENST00000407977 TXLNAP40222 546 aa15.43■□□□□ 0.06
RNF43-201ENST00000407977 WASHC4Q2M389 1173 aa15.43■□□□□ 0.06
RNF43-201ENST00000407977 WDR63Q8IWG1 891 aa15.43■□□□□ 0.06
RNF43-201ENST00000407977 CYP46A1Q9Y6A2 500 aa15.43■□□□□ 0.06
RNF43-201ENST00000407977 RUSC2Q8N2Y8 1516 aa15.43■□□□□ 0.06
RNF43-201ENST00000407977 GOLGA6L10A6NI86 522 aa15.42■□□□□ 0.06
RNF43-201ENST00000407977 SURF6O75683 361 aaKnown RBP15.42■□□□□ 0.06
RNF43-201ENST00000407977 NECTIN2Q92692 538 aa15.42■□□□□ 0.06
RNF43-201ENST00000407977 FOSBP53539 338 aa15.42■□□□□ 0.06
RNF43-201ENST00000407977 CCDC43Q96MW1 224 aaKnown RBP15.42■□□□□ 0.06
RNF43-201ENST00000407977 SPC24Q8NBT2 197 aa15.42■□□□□ 0.06
RNF43-201ENST00000407977 PNISRQ8TF01 805 aaKnown RBP15.42■□□□□ 0.06
RNF43-201ENST00000407977 LRRC9Q6ZRR7 1453 aa15.41■□□□□ 0.06
RNF43-201ENST00000407977 MTHFSP49914 203 aa15.41■□□□□ 0.06
RNF43-201ENST00000407977 SRCIN1Q9C0H9 1055 aa15.41■□□□□ 0.06
RNF43-201ENST00000407977 GNAI2P04899 355 aa15.41■□□□□ 0.06
RNF43-201ENST00000407977 SERPINC1P01008 464 aa15.41■□□□□ 0.06
RNF43-201ENST00000407977 RIC3Q7Z5B4 369 aa15.41■□□□□ 0.06
RNF43-201ENST00000407977 HSP90AB2PQ58FF8 381 aa15.41■□□□□ 0.06
RNF43-201ENST00000407977 PPFIBP1Q86W92 1011 aa15.41■□□□□ 0.06
RNF43-201ENST00000407977 ZSCAN31Q96LW9 406 aaPredicted RBP15.41■□□□□ 0.06
RNF43-201ENST00000407977 NEUROD6Q96NK8 337 aa15.41■□□□□ 0.06
RNF43-201ENST00000407977 AKNAQ7Z591 1439 aa15.41■□□□□ 0.06
RNF43-201ENST00000407977 EXOSC9Q06265 439 aaKnown RBP15.4■□□□□ 0.06
RNF43-201ENST00000407977 ZNF428Q96B54 188 aa15.4■□□□□ 0.06
RNF43-201ENST00000407977 FMNL2Q96PY5 1086 aa15.4■□□□□ 0.06
RNF43-201ENST00000407977 ANKRD50Q9ULJ7 1429 aa15.4■□□□□ 0.06
RNF43-201ENST00000407977 IQCEQ6IPM2 695 aa15.4■□□□□ 0.06
RNF43-201ENST00000407977 CTDP1Q9Y5B0 961 aaPredicted RBP15.39■□□□□ 0.05
RNF43-201ENST00000407977 HMOX1P09601 288 aa15.39■□□□□ 0.05
RNF43-201ENST00000407977 GAS2L2Q8NHY3 880 aa15.39■□□□□ 0.05
RNF43-201ENST00000407977 FYCO1Q9BQS8 1478 aa15.39■□□□□ 0.05
RNF43-201ENST00000407977 MVPQ14764 893 aaKnown RBP15.39■□□□□ 0.05
RNF43-201ENST00000407977 CEP57L1Q8IYX8 460 aa15.39■□□□□ 0.05
RNF43-201ENST00000407977 RRBP1Q9P2E9 1410 aaKnown RBP15.38■□□□□ 0.05
RNF43-201ENST00000407977 CCT4P50991 539 aaKnown RBP15.38■□□□□ 0.05
RNF43-201ENST00000407977 TWISTNBQ3B726 338 aaPredicted RBP15.38■□□□□ 0.05
RNF43-201ENST00000407977 TTLL5Q6EMB2 1281 aa15.38■□□□□ 0.05
RNF43-201ENST00000407977 TBC1D2BQ9UPU7 963 aa15.38■□□□□ 0.05
RNF43-201ENST00000407977 CFAP45Q9UL16 551 aa15.38■□□□□ 0.05
RNF43-201ENST00000407977 PTPRGP23470 1445 aa15.38■□□□□ 0.05
RNF43-201ENST00000407977 ZRSR2Q15696 482 aaKnown RBP15.38■□□□□ 0.05
RNF43-201ENST00000407977 ATF7IPQ6VMQ6 1270 aa15.37■□□□□ 0.05
RNF43-201ENST00000407977 KIF21BO75037 1637 aa15.37■□□□□ 0.05
RNF43-201ENST00000407977 CHD1LQ86WJ1 897 aa15.37■□□□□ 0.05
RNF43-201ENST00000407977 DEF6Q9H4E7 631 aa15.37■□□□□ 0.05
RNF43-201ENST00000407977 GBP3Q9H0R5 595 aa15.37■□□□□ 0.05
RNF43-201ENST00000407977 GGNBP2Q9H3C7 697 aa15.37■□□□□ 0.05
RNF43-201ENST00000407977 STIM1Q13586 685 aa15.36■□□□□ 0.05
RNF43-201ENST00000407977 NUP62CLQ9H1M0 184 aa15.36■□□□□ 0.05
RNF43-201ENST00000407977 PPP6R1Q9UPN7 881 aa15.36■□□□□ 0.05
RNF43-201ENST00000407977 HFM1A2PYH4 1435 aa15.36■□□□□ 0.05
RNF43-201ENST00000407977 LRRCC1Q9C099 1032 aa15.36■□□□□ 0.05
RNF43-201ENST00000407977 NOB1Q9ULX3 412 aaKnown RBP15.36■□□□□ 0.05
RNF43-201ENST00000407977 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
RNF43-201ENST00000407977 LARP1BQ659C4 914 aaKnown RBP15.36■□□□□ 0.05
RNF43-201ENST00000407977 BCL11BQ9C0K0 894 aaPredicted RBP15.36■□□□□ 0.05
RNF43-201ENST00000407977 SMTNL1A8MU46 457 aa15.35■□□□□ 0.05
RNF43-201ENST00000407977 ME1P48163 572 aa15.35■□□□□ 0.05
RNF43-201ENST00000407977 UBXN4Q92575 508 aa15.35■□□□□ 0.05
RNF43-201ENST00000407977 PDCL3Q9H2J4 239 aa15.35■□□□□ 0.05
RNF43-201ENST00000407977 BCAR3O75815 825 aa15.34■□□□□ 0.05
RNF43-201ENST00000407977 CCDC181Q5TID7 509 aa15.34■□□□□ 0.05
RNF43-201ENST00000407977 RAPGEF4Q8WZA2 1011 aa15.34■□□□□ 0.05
RNF43-201ENST00000407977 RAD21O60216 631 aa15.34■□□□□ 0.05
RNF43-201ENST00000407977 EVA1CP58658 441 aa15.34■□□□□ 0.05
RNF43-201ENST00000407977 CASKIN1Q8WXD9 1431 aa15.33■□□□□ 0.05
RNF43-201ENST00000407977 MCM5P33992 734 aa15.33■□□□□ 0.05
RNF43-201ENST00000407977 SPATA32Q96LK8 384 aa15.33■□□□□ 0.05
RNF43-201ENST00000407977 CCAR1Q8IX12 1150 aaKnown RBP15.33■□□□□ 0.04
RNF43-201ENST00000407977 HSP90AB3PQ58FF7 597 aa15.33■□□□□ 0.04
RNF43-201ENST00000407977 KRT32Q14532 448 aa15.33■□□□□ 0.04
RNF43-201ENST00000407977 TRIM22Q8IYM9 498 aa15.33■□□□□ 0.04
RNF43-201ENST00000407977 PRKAR2BP31323 418 aa15.32■□□□□ 0.04
RNF43-201ENST00000407977 TMCO3Q6UWJ1 677 aa15.32■□□□□ 0.04
RNF43-201ENST00000407977 CDK5RAP3Q96JB5 506 aa15.32■□□□□ 0.04
RNF43-201ENST00000407977 SLC3A2P08195 630 aaKnown RBP15.32■□□□□ 0.04
RNF43-201ENST00000407977 BRPF1P55201 1214 aaPredicted RBP15.32■□□□□ 0.04
RNF43-201ENST00000407977 MAP3K11Q16584 847 aa15.32■□□□□ 0.04
RNF43-201ENST00000407977 UPF3BQ9BZI7 483 aaKnown RBP15.32■□□□□ 0.04
RNF43-201ENST00000407977 IGF1RP08069 1367 aa15.32■□□□□ 0.04
RNF43-201ENST00000407977 ZFYVE27Q5T4F4 411 aa15.32■□□□□ 0.04
RNF43-201ENST00000407977 RPAP2Q8IXW5 612 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms