RNA–Protein interactions for RNA: ENST00000407417.7

NFIA-208, Transcript of nuclear factor I A, human

TSL 2 BASIC

Gene NFIA, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFIA-208	ENST00000407417	PRR36	Q9H6K5	1346 aa		11.14	□□□□□ -0.63
NFIA-208	ENST00000407417	WASL	O00401	505 aa	Predicted RBP	11.14	□□□□□ -0.63
NFIA-208	ENST00000407417	LRRC59	Q96AG4	307 aa	Known RBP	11.14	□□□□□ -0.63
NFIA-208	ENST00000407417	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.14	□□□□□ -0.63
NFIA-208	ENST00000407417	NUTM2E	B1AL46	878 aa	Predicted RBP	11.14	□□□□□ -0.63
NFIA-208	ENST00000407417	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.14	□□□□□ -0.63
NFIA-208	ENST00000407417	PODXL2	Q9NZ53	605 aa		11.14	□□□□□ -0.63
NFIA-208	ENST00000407417	PHF8	Q9UPP1	1060 aa		11.14	□□□□□ -0.63
NFIA-208	ENST00000407417	LRP6	O75581	1613 aa		11.13	□□□□□ -0.63
NFIA-208	ENST00000407417	USP32	Q8NFA0	1604 aa		11.13	□□□□□ -0.63
NFIA-208	ENST00000407417	NPHP3	Q7Z494	1330 aa		11.13	□□□□□ -0.63
NFIA-208	ENST00000407417	PMFBP1	Q8TBY8	1022 aa		11.13	□□□□□ -0.63
NFIA-208	ENST00000407417	PNPLA6	Q8IY17	1366 aa		11.13	□□□□□ -0.63
NFIA-208	ENST00000407417	CENPJ	Q9HC77	1338 aa	Predicted RBP	11.13	□□□□□ -0.63
NFIA-208	ENST00000407417	PXDN	Q92626	1479 aa		11.12	□□□□□ -0.63
NFIA-208	ENST00000407417	RGPD8	O14715	1765 aa	Predicted RBP	11.12	□□□□□ -0.63
NFIA-208	ENST00000407417	SHPRH	Q149N8	1683 aa		11.12	□□□□□ -0.63
NFIA-208	ENST00000407417	SPATA31A6	Q5VVP1	1343 aa		11.12	□□□□□ -0.63
NFIA-208	ENST00000407417	ANKAR	Q7Z5J8	1434 aa		11.12	□□□□□ -0.63
NFIA-208	ENST00000407417	CDK19	Q9BWU1	502 aa		11.12	□□□□□ -0.63
NFIA-208	ENST00000407417	TULP4	Q9NRJ4	1543 aa		11.12	□□□□□ -0.63
NFIA-208	ENST00000407417	RGS17	Q9UGC6	210 aa	Predicted RBP	11.11	□□□□□ -0.63
NFIA-208	ENST00000407417	KRT28	Q7Z3Y7	464 aa		11.11	□□□□□ -0.63
NFIA-208	ENST00000407417	GPRASP1	Q5JY77	1395 aa		11.11	□□□□□ -0.63
NFIA-208	ENST00000407417	NUDT16	Q96DE0	195 aa	Known RBP	11.1	□□□□□ -0.63
NFIA-208	ENST00000407417	CARD11	Q9BXL7	1154 aa		11.1	□□□□□ -0.63
NFIA-208	ENST00000407417	BACH2	Q9BYV9	841 aa		11.1	□□□□□ -0.63
NFIA-208	ENST00000407417	NUDC	Q9Y266	331 aa		11.1	□□□□□ -0.63
NFIA-208	ENST00000407417	RALGAPB	Q86X10	1494 aa		11.1	□□□□□ -0.63
NFIA-208	ENST00000407417	KIF1A	Q12756	1690 aa		11.1	□□□□□ -0.63
NFIA-208	ENST00000407417	MEX3C	Q5U5Q3	659 aa	Known RBP	11.09	□□□□□ -0.63
NFIA-208	ENST00000407417	EIF3A	Q14152	1382 aa	Known RBP	11.09	□□□□□ -0.63
NFIA-208	ENST00000407417	ATP7B	P35670	1465 aa		11.09	□□□□□ -0.63
NFIA-208	ENST00000407417	CABP2	Q9NPB3	220 aa		11.09	□□□□□ -0.63
NFIA-208	ENST00000407417	QRICH2	Q9H0J4	1663 aa		11.08	□□□□□ -0.63
NFIA-208	ENST00000407417	NFKBIB	Q15653	356 aa		11.08	□□□□□ -0.64
NFIA-208	ENST00000407417	PDE4A	P27815	886 aa		11.08	□□□□□ -0.64
NFIA-208	ENST00000407417	SRPK2	P78362	688 aa	Known RBP	11.08	□□□□□ -0.64
NFIA-208	ENST00000407417	PSME1	Q06323	249 aa		11.08	□□□□□ -0.64
NFIA-208	ENST00000407417	LAS1L	Q9Y4W2	734 aa	Known RBP	11.08	□□□□□ -0.64
NFIA-208	ENST00000407417	SPATA31A3	Q5VYP0	1347 aa		11.07	□□□□□ -0.64
NFIA-208	ENST00000407417	PLEKHG5	O94827	1062 aa		11.07	□□□□□ -0.64
NFIA-208	ENST00000407417	ADAMTS2	O95450	1211 aa		11.07	□□□□□ -0.64
NFIA-208	ENST00000407417	VSIG10	Q8N0Z9	540 aa		11.07	□□□□□ -0.64
NFIA-208	ENST00000407417	FRAT1	Q92837	279 aa	Predicted RBP	11.07	□□□□□ -0.64
NFIA-208	ENST00000407417	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.07	□□□□□ -0.64
NFIA-208	ENST00000407417	POTEA	Q6S8J7	498 aa		11.06	□□□□□ -0.64
NFIA-208	ENST00000407417	NGDN	Q8NEJ9	315 aa	Known RBP	11.06	□□□□□ -0.64
NFIA-208	ENST00000407417	LMOD2	Q6P5Q4	547 aa		11.06	□□□□□ -0.64
NFIA-208	ENST00000407417	TNS3	Q68CZ2	1445 aa		11.05	□□□□□ -0.64
NFIA-208	ENST00000407417	C8orf37	Q96NL8	207 aa		11.05	□□□□□ -0.64
NFIA-208	ENST00000407417	CCDC61	Q9Y6R9	512 aa		11.05	□□□□□ -0.64
NFIA-208	ENST00000407417	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.05	□□□□□ -0.64
NFIA-208	ENST00000407417	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.04	□□□□□ -0.64
NFIA-208	ENST00000407417	SBNO1	A3KN83	1393 aa		11.04	□□□□□ -0.64
NFIA-208	ENST00000407417	CABLES1	Q8TDN4	633 aa		11.04	□□□□□ -0.64
NFIA-208	ENST00000407417	ACE	P12821	1306 aa		11.04	□□□□□ -0.64
NFIA-208	ENST00000407417	EVC2	Q86UK5	1308 aa		11.04	□□□□□ -0.64
NFIA-208	ENST00000407417	TOPAZ1	Q8N9V7	1692 aa		11.03	□□□□□ -0.64
NFIA-208	ENST00000407417	AFF2	P51816	1311 aa		11.03	□□□□□ -0.64
NFIA-208	ENST00000407417	PPIP5K1	Q6PFW1	1433 aa		11.03	□□□□□ -0.64
NFIA-208	ENST00000407417	PLEKHG3	A1L390	1219 aa		11.03	□□□□□ -0.64
NFIA-208	ENST00000407417	ITSN1	Q15811	1721 aa		11.02	□□□□□ -0.64
NFIA-208	ENST00000407417	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.02	□□□□□ -0.64
NFIA-208	ENST00000407417	L1TD1	Q5T7N2	865 aa	Known RBP	11.02	□□□□□ -0.64
NFIA-208	ENST00000407417	MRS2	Q9HD23	443 aa		11.02	□□□□□ -0.64
NFIA-208	ENST00000407417	CABP1	Q9NZU7	370 aa		11.02	□□□□□ -0.64
NFIA-208	ENST00000407417	ST20-MTHFS	A0A0A6YYL1	179 aa		11.02	□□□□□ -0.65
NFIA-208	ENST00000407417	POLR3A	O14802	1390 aa	Predicted RBP	11.02	□□□□□ -0.65
NFIA-208	ENST00000407417	NGLY1	Q96IV0	654 aa		11.01	□□□□□ -0.65
NFIA-208	ENST00000407417	ARHGEF10	O15013	1369 aa		11	□□□□□ -0.65
NFIA-208	ENST00000407417	HSP90AA1	P07900	732 aa	Known RBP	11	□□□□□ -0.65
NFIA-208	ENST00000407417	NUTM2G	Q5VZR2	741 aa		11	□□□□□ -0.65
NFIA-208	ENST00000407417	SBNO2	Q9Y2G9	1366 aa		11	□□□□□ -0.65
NFIA-208	ENST00000407417	HAP1	P54257	671 aa	Predicted RBP	11	□□□□□ -0.65
NFIA-208	ENST00000407417	ZNF772	Q68DY9	489 aa	Predicted RBP	11	□□□□□ -0.65
NFIA-208	ENST00000407417	USP47	Q96K76	1375 aa		10.99	□□□□□ -0.65
NFIA-208	ENST00000407417	CLCN1	P35523	988 aa		10.99	□□□□□ -0.65
NFIA-208	ENST00000407417	TESK2	Q96S53	571 aa		10.99	□□□□□ -0.65
NFIA-208	ENST00000407417	ALS2	Q96Q42	1657 aa		10.99	□□□□□ -0.65
NFIA-208	ENST00000407417	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.99	□□□□□ -0.65	2e-6	■■■□□ 16.4
NFIA-208	ENST00000407417	FAM9B	Q8IZU0	186 aa		10.98	□□□□□ -0.65
NFIA-208	ENST00000407417	CCDC7	Q96M83	1385 aa		10.98	□□□□□ -0.65
NFIA-208	ENST00000407417	NPM2	Q86SE8	214 aa	Known RBP	10.97	□□□□□ -0.65
NFIA-208	ENST00000407417	USP21	Q9UK80	565 aa		10.97	□□□□□ -0.65
NFIA-208	ENST00000407417	ATAD2	Q6PL18	1390 aa		10.97	□□□□□ -0.65
NFIA-208	ENST00000407417	QTRT2	Q9H974	415 aa	Known RBP	10.97	□□□□□ -0.65
NFIA-208	ENST00000407417	ABCA3	Q99758	1704 aa		10.96	□□□□□ -0.65
NFIA-208	ENST00000407417	USP6	P35125	1406 aa		10.96	□□□□□ -0.65
NFIA-208	ENST00000407417	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.96	□□□□□ -0.65
NFIA-208	ENST00000407417	HSPA5	P11021	654 aa	Known RBP	10.96	□□□□□ -0.66
NFIA-208	ENST00000407417	CCDC184	Q52MB2	194 aa		10.96	□□□□□ -0.66
NFIA-208	ENST00000407417	ABTB2	Q8N961	1025 aa		10.96	□□□□□ -0.66
NFIA-208	ENST00000407417	TMC1	Q8TDI8	760 aa		10.96	□□□□□ -0.66
NFIA-208	ENST00000407417	RXRB	P28702	533 aa		10.95	□□□□□ -0.66
NFIA-208	ENST00000407417	SLC12A5	Q9H2X9	1139 aa		10.95	□□□□□ -0.66
NFIA-208	ENST00000407417	PNN	Q9H307	717 aa	Known RBP	10.95	□□□□□ -0.66
NFIA-208	ENST00000407417	MARF1	Q9Y4F3	1742 aa	Known RBP	10.95	□□□□□ -0.66
NFIA-208	ENST00000407417	BCL9L	Q86UU0	1499 aa		10.95	□□□□□ -0.66
NFIA-208	ENST00000407417	FAM83G	A6ND36	823 aa		10.94	□□□□□ -0.66

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