RNA–Protein interactions for RNA: ENST00000406381.6

ERBB2-202, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-202ENST00000406381 NPHP1O15259 732 aa15.47■□□□□ 0.07
ERBB2-202ENST00000406381 TRHP20396 242 aaPredicted RBP15.47■□□□□ 0.07
ERBB2-202ENST00000406381 C9orf78Q9NZ63 289 aaPredicted RBP15.47■□□□□ 0.07
ERBB2-202ENST00000406381 TSR1Q2NL82 804 aaKnown RBP15.47■□□□□ 0.07
ERBB2-202ENST00000406381 TMEM132EQ6IEE7 984 aa15.47■□□□□ 0.07
ERBB2-202ENST00000406381 FBXW7Q969H0 707 aa15.47■□□□□ 0.07
ERBB2-202ENST00000406381 SSH1Q8WYL5 1049 aa15.46■□□□□ 0.07
ERBB2-202ENST00000406381 PSMA5P28066 241 aa15.46■□□□□ 0.07
ERBB2-202ENST00000406381 CNTROBQ8N137 903 aa15.46■□□□□ 0.07
ERBB2-202ENST00000406381 CPLX2Q6PUV4 134 aaKnown RBP15.46■□□□□ 0.07
ERBB2-202ENST00000406381 NECTIN2Q92692 538 aa15.46■□□□□ 0.07
ERBB2-202ENST00000406381 TSPYL4Q9UJ04 414 aa15.46■□□□□ 0.07
ERBB2-202ENST00000406381 ACBD3Q9H3P7 528 aa15.45■□□□□ 0.06
ERBB2-202ENST00000406381 ZHX1Q9UKY1 873 aaPredicted RBP15.45■□□□□ 0.06
ERBB2-202ENST00000406381 TROQ12816 1431 aaPredicted RBP15.45■□□□□ 0.06
ERBB2-202ENST00000406381 KRT85P78386 507 aa15.45■□□□□ 0.06
ERBB2-202ENST00000406381 BMP2KLQ5H9B9 411 aa15.45■□□□□ 0.06
ERBB2-202ENST00000406381 CCDC70Q6NSX1 233 aa15.45■□□□□ 0.06
ERBB2-202ENST00000406381 KINO60870 393 aaKnown RBP15.44■□□□□ 0.06
ERBB2-202ENST00000406381 UBTFL1P0CB47 393 aaPredicted RBP15.44■□□□□ 0.06
ERBB2-202ENST00000406381 TNMDQ9H2S6 317 aa15.44■□□□□ 0.06
ERBB2-202ENST00000406381 NGDNQ8NEJ9 315 aaKnown RBP15.44■□□□□ 0.06
ERBB2-202ENST00000406381 AEBP1Q8IUX7 1158 aa15.44■□□□□ 0.06
ERBB2-202ENST00000406381 PRDM2Q13029 1718 aa15.44■□□□□ 0.06
ERBB2-202ENST00000406381 TMPOP42166 694 aaKnown RBP15.44■□□□□ 0.06
ERBB2-202ENST00000406381 RPAP2Q8IXW5 612 aaPredicted RBP15.44■□□□□ 0.06
ERBB2-202ENST00000406381 LTV1Q96GA3 475 aaPredicted RBP15.44■□□□□ 0.06
ERBB2-202ENST00000406381 PCDHB15Q9Y5E8 787 aa15.44■□□□□ 0.06
ERBB2-202ENST00000406381 TULP1O00294 542 aaPredicted RBP15.43■□□□□ 0.06
ERBB2-202ENST00000406381 CPLX1O14810 134 aa15.43■□□□□ 0.06
ERBB2-202ENST00000406381 EIF2S2P20042 333 aaKnown RBP15.43■□□□□ 0.06
ERBB2-202ENST00000406381 OFD1O75665 1012 aa15.43■□□□□ 0.06
ERBB2-202ENST00000406381 SURF6O75683 361 aaKnown RBP15.43■□□□□ 0.06
ERBB2-202ENST00000406381 PRIMPOLQ96LW4 560 aa15.43■□□□□ 0.06
ERBB2-202ENST00000406381 GPRASP1Q5JY77 1395 aa15.43■□□□□ 0.06
ERBB2-202ENST00000406381 ABCC5O15440 1437 aa15.43■□□□□ 0.06
ERBB2-202ENST00000406381 DHX29Q7Z478 1369 aaKnown RBP15.43■□□□□ 0.06
ERBB2-202ENST00000406381 PTPRKQ15262 1439 aa15.43■□□□□ 0.06
ERBB2-202ENST00000406381 PRG4Q92954 1404 aaPredicted RBP15.43■□□□□ 0.06
ERBB2-202ENST00000406381 GNAI2P04899 355 aa15.42■□□□□ 0.06
ERBB2-202ENST00000406381 G3BP1Q13283 466 aaKnown RBP eCLIP15.42■□□□□ 0.06
ERBB2-202ENST00000406381 PES1O00541 588 aaKnown RBP15.42■□□□□ 0.06
ERBB2-202ENST00000406381 CCP110O43303 1012 aa15.42■□□□□ 0.06
ERBB2-202ENST00000406381 EPRSP07814 1512 aaKnown RBP15.42■□□□□ 0.06
ERBB2-202ENST00000406381 CLASRPQ8N2M8 674 aaKnown RBP15.42■□□□□ 0.06
ERBB2-202ENST00000406381 HOOK1Q9UJC3 728 aaKnown RBP15.42■□□□□ 0.06
ERBB2-202ENST00000406381 HECW1Q76N89 1606 aa15.42■□□□□ 0.06
ERBB2-202ENST00000406381 TRIM27P14373 513 aa15.41■□□□□ 0.06
ERBB2-202ENST00000406381 RASSF8Q8NHQ8 419 aa15.41■□□□□ 0.06
ERBB2-202ENST00000406381 USP25Q9UHP3 1055 aa15.41■□□□□ 0.06
ERBB2-202ENST00000406381 NUTM2FA1L443 756 aa15.41■□□□□ 0.06
ERBB2-202ENST00000406381 HS1BP3Q53T59 392 aa15.41■□□□□ 0.06
ERBB2-202ENST00000406381 SYNE3Q6ZMZ3 975 aa15.41■□□□□ 0.06
ERBB2-202ENST00000406381 SEC24BO95487 1268 aa15.41■□□□□ 0.06
ERBB2-202ENST00000406381 ZSCAN23Q3MJ62 389 aa15.41■□□□□ 0.06
ERBB2-202ENST00000406381 SNX21Q969T3 373 aa15.41■□□□□ 0.06
ERBB2-202ENST00000406381 CCDC183Q5T5S1 534 aa15.41■□□□□ 0.06
ERBB2-202ENST00000406381 LRRCC1Q9C099 1032 aa15.41■□□□□ 0.06
ERBB2-202ENST00000406381 PARD3Q8TEW0 1356 aa15.4■□□□□ 0.06
ERBB2-202ENST00000406381 IPO7O95373 1038 aaKnown RBP15.4■□□□□ 0.06
ERBB2-202ENST00000406381 TEFQ10587 303 aa15.4■□□□□ 0.06
ERBB2-202ENST00000406381 DHX8Q14562 1220 aaKnown RBP15.4■□□□□ 0.06
ERBB2-202ENST00000406381 NUP62CLQ9H1M0 184 aa15.4■□□□□ 0.06
ERBB2-202ENST00000406381 ZKSCAN5Q9Y2L8 839 aa15.4■□□□□ 0.06
ERBB2-202ENST00000406381 SMC2O95347 1197 aa15.4■□□□□ 0.06
ERBB2-202ENST00000406381 PPP4R3BQ5MIZ7 849 aa15.4■□□□□ 0.06
ERBB2-202ENST00000406381 TBC1D9Q6ZT07 1266 aa15.4■□□□□ 0.06
ERBB2-202ENST00000406381 CYP46A1Q9Y6A2 500 aa15.4■□□□□ 0.06
ERBB2-202ENST00000406381 TAF7LQ5H9L4 462 aa15.39■□□□□ 0.06
ERBB2-202ENST00000406381 LARP1BQ659C4 914 aaKnown RBP15.39■□□□□ 0.06
ERBB2-202ENST00000406381 POLA1P09884 1462 aaPredicted RBP15.39■□□□□ 0.05
ERBB2-202ENST00000406381 ALDH1L2Q3SY69 923 aa15.39■□□□□ 0.05
ERBB2-202ENST00000406381 FMNL2Q96PY5 1086 aa15.39■□□□□ 0.05
ERBB2-202ENST00000406381 HDAC1Q13547 482 aaPredicted RBP15.39■□□□□ 0.05
ERBB2-202ENST00000406381 LRRFIP1Q32MZ4 808 aaKnown RBP15.39■□□□□ 0.05
ERBB2-202ENST00000406381 AK7Q96M32 723 aa15.39■□□□□ 0.05
ERBB2-202ENST00000406381 SRCIN1Q9C0H9 1055 aa15.39■□□□□ 0.05
ERBB2-202ENST00000406381 CCDC9Q9Y3X0 531 aaKnown RBP15.39■□□□□ 0.05
ERBB2-202ENST00000406381 FOSBP53539 338 aa15.38■□□□□ 0.05
ERBB2-202ENST00000406381 TRIM29Q14134 588 aa15.38■□□□□ 0.05
ERBB2-202ENST00000406381 NEXNQ0ZGT2 675 aa15.38■□□□□ 0.05
ERBB2-202ENST00000406381 LEKR1Q6ZMV7 388 aa15.38■□□□□ 0.05
ERBB2-202ENST00000406381 TOMM22Q9NS69 142 aa15.38■□□□□ 0.05
ERBB2-202ENST00000406381 SLC4A2P04920 1241 aa15.38■□□□□ 0.05
ERBB2-202ENST00000406381 MAP3K11Q16584 847 aa15.38■□□□□ 0.05
ERBB2-202ENST00000406381 LRSAM1Q6UWE0 723 aa15.38■□□□□ 0.05
ERBB2-202ENST00000406381 PDIA4P13667 645 aaKnown RBP15.38■□□□□ 0.05
ERBB2-202ENST00000406381 ANKRD20A12PQ8NF67 263 aa15.38■□□□□ 0.05
ERBB2-202ENST00000406381 CCT4P50991 539 aaKnown RBP15.37■□□□□ 0.05
ERBB2-202ENST00000406381 FCHSD2O94868 740 aa15.37■□□□□ 0.05
ERBB2-202ENST00000406381 FILIP1Q7Z7B0 1213 aa15.37■□□□□ 0.05
ERBB2-202ENST00000406381 ERICH4A6NGS2 130 aa15.37■□□□□ 0.05
ERBB2-202ENST00000406381 SMC5Q8IY18 1101 aa15.37■□□□□ 0.05
ERBB2-202ENST00000406381 UPF3BQ9BZI7 483 aaKnown RBP15.37■□□□□ 0.05
ERBB2-202ENST00000406381 CGNQ9P2M7 1197 aaKnown RBP15.37■□□□□ 0.05
ERBB2-202ENST00000406381 RBM27Q9P2N5 1060 aaKnown RBP15.37■□□□□ 0.05
ERBB2-202ENST00000406381 KDM2BQ8NHM5 1336 aa15.37■□□□□ 0.05
ERBB2-202ENST00000406381 RAB3GAP1Q15042 981 aa15.36■□□□□ 0.05
ERBB2-202ENST00000406381 UVSSAQ2YD98 709 aa15.36■□□□□ 0.05
ERBB2-202ENST00000406381 OLFM4Q6UX06 510 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms