RNA–Protein interactions for RNA: ENST00000405402.6

GSE1-203, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 4,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-203ENST00000405402 C14orf93Q9H972 538 aaKnown RBP16.77■□□□□ 0.28
GSE1-203ENST00000405402 FAM135AQ9P2D6 1515 aa16.77■□□□□ 0.28
GSE1-203ENST00000405402 KIAA2012Q0VF49 1180 aa16.77■□□□□ 0.28
GSE1-203ENST00000405402 C1orf141Q5JVX7 400 aa16.77■□□□□ 0.28
GSE1-203ENST00000405402 SYAP1Q96A49 352 aaPredicted RBP16.77■□□□□ 0.28
GSE1-203ENST00000405402 SKOR2Q2VWA4 1001 aaPredicted RBP16.77■□□□□ 0.27
GSE1-203ENST00000405402 NUDT16Q96DE0 195 aaKnown RBP16.77■□□□□ 0.27
GSE1-203ENST00000405402 GPATCH3Q96I76 525 aa16.76■□□□□ 0.27
GSE1-203ENST00000405402 EXOC6BQ9Y2D4 811 aa16.76■□□□□ 0.27
GSE1-203ENST00000405402 RTEL1-TNFRSF6BF6WH68 1400 aa16.76■□□□□ 0.27
GSE1-203ENST00000405402 PRPF40AO75400 957 aaKnown RBP16.76■□□□□ 0.27
GSE1-203ENST00000405402 NFE2L2Q16236 605 aa16.76■□□□□ 0.27
GSE1-203ENST00000405402 SPATA31E1Q6ZUB1 1445 aa16.76■□□□□ 0.27
GSE1-203ENST00000405402 F6X3S4 739 aa16.75■□□□□ 0.27
GSE1-203ENST00000405402 UBTFL1P0CB47 393 aaPredicted RBP16.75■□□□□ 0.27
GSE1-203ENST00000405402 GCC1Q96CN9 775 aa16.75■□□□□ 0.27
GSE1-203ENST00000405402 IL1RAPL2Q9NP60 686 aa16.75■□□□□ 0.27
GSE1-203ENST00000405402 KIAA0556O60303 1618 aa16.75■□□□□ 0.27
GSE1-203ENST00000405402 VPS37CA5D8V6 355 aaPredicted RBP16.74■□□□□ 0.27
GSE1-203ENST00000405402 CCDC61Q9Y6R9 512 aa16.74■□□□□ 0.27
GSE1-203ENST00000405402 ZRANB1Q9UGI0 708 aa16.74■□□□□ 0.27
GSE1-203ENST00000405402 RPGRIP1LQ68CZ1 1315 aa16.74■□□□□ 0.27
GSE1-203ENST00000405402 IFIT2P09913 472 aaKnown RBP16.73■□□□□ 0.27
GSE1-203ENST00000405402 FOSBP53539 338 aa16.73■□□□□ 0.27
GSE1-203ENST00000405402 CD109Q6YHK3 1445 aa16.73■□□□□ 0.27
GSE1-203ENST00000405402 FYB1O15117 783 aa16.73■□□□□ 0.27
GSE1-203ENST00000405402 CCDC27Q2M243 656 aa16.72■□□□□ 0.27
GSE1-203ENST00000405402 FANCAO15360 1455 aa16.72■□□□□ 0.27
GSE1-203ENST00000405402 XPCQ01831 940 aaPredicted RBP16.72■□□□□ 0.27
GSE1-203ENST00000405402 NPHP1O15259 732 aa16.72■□□□□ 0.27
GSE1-203ENST00000405402 ADAMTS12P58397 1594 aa16.71■□□□□ 0.27
GSE1-203ENST00000405402 MRE11P49959 708 aa16.71■□□□□ 0.27
GSE1-203ENST00000405402 NUCB2P80303 420 aa16.71■□□□□ 0.27
GSE1-203ENST00000405402 TAF7LQ5H9L4 462 aa16.71■□□□□ 0.27
GSE1-203ENST00000405402 RSPH6AQ9H0K4 717 aa16.71■□□□□ 0.27
GSE1-203ENST00000405402 ATAD2Q6PL18 1390 aa16.71■□□□□ 0.26
GSE1-203ENST00000405402 NASPP49321 788 aaPredicted RBP16.7■□□□□ 0.26
GSE1-203ENST00000405402 CHAF1AQ13111 956 aaPredicted RBP16.7■□□□□ 0.26
GSE1-203ENST00000405402 BCL11BQ9C0K0 894 aaPredicted RBP16.7■□□□□ 0.26
GSE1-203ENST00000405402 CT47B1P0C2W7 299 aaPredicted RBP16.7■□□□□ 0.26
GSE1-203ENST00000405402 GNL2Q13823 731 aaKnown RBP16.7■□□□□ 0.26
GSE1-203ENST00000405402 HDGFL1Q5TGJ6 251 aa16.7■□□□□ 0.26
GSE1-203ENST00000405402 TULP1O00294 542 aaPredicted RBP16.7■□□□□ 0.26
GSE1-203ENST00000405402 HSP90AA2PQ14568 343 aaPredicted RBP16.7■□□□□ 0.26
GSE1-203ENST00000405402 TSHZ3Q63HK5 1081 aa16.7■□□□□ 0.26
GSE1-203ENST00000405402 K7ELQ4 463 aaPredicted RBP16.69■□□□□ 0.26
GSE1-203ENST00000405402 A2MP01023 1474 aa16.69■□□□□ 0.26
GSE1-203ENST00000405402 NCKAP5LQ9HCH0 1330 aa16.69■□□□□ 0.26
GSE1-203ENST00000405402 CEBPAP49715 358 aaPredicted RBP16.68■□□□□ 0.26
GSE1-203ENST00000405402 RNF123Q5XPI4 1314 aa16.68■□□□□ 0.26
GSE1-203ENST00000405402 GNAI2P04899 355 aa16.68■□□□□ 0.26
GSE1-203ENST00000405402 NLRP2Q9NX02 1062 aa16.68■□□□□ 0.26
GSE1-203ENST00000405402 ESCO1Q5FWF5 840 aa16.68■□□□□ 0.26
GSE1-203ENST00000405402 USHBP1Q8N6Y0 703 aa16.68■□□□□ 0.26
GSE1-203ENST00000405402 PLCH2O75038 1416 aa16.68■□□□□ 0.26
GSE1-203ENST00000405402 DNMT1P26358 1616 aaKnown RBP16.68■□□□□ 0.26
GSE1-203ENST00000405402 NINLQ9Y2I6 1382 aa16.68■□□□□ 0.26
GSE1-203ENST00000405402 UPF3BQ9BZI7 483 aaKnown RBP16.68■□□□□ 0.26
GSE1-203ENST00000405402 KRT24Q2M2I5 525 aa16.67■□□□□ 0.26
GSE1-203ENST00000405402 CCDC30Q5VVM6 783 aa16.67■□□□□ 0.26
GSE1-203ENST00000405402 FAM43AQ8N2R8 423 aa16.67■□□□□ 0.26
GSE1-203ENST00000405402 FBXW7Q969H0 707 aa16.67■□□□□ 0.26
GSE1-203ENST00000405402 CHMP4AQ9BY43 222 aa16.67■□□□□ 0.26
GSE1-203ENST00000405402 ZKSCAN1P17029 563 aaPredicted RBP16.66■□□□□ 0.26
GSE1-203ENST00000405402 G3BP1Q13283 466 aaKnown RBP eCLIP16.66■□□□□ 0.26
GSE1-203ENST00000405402 TSPYL6Q8N831 410 aa16.66■□□□□ 0.26
GSE1-203ENST00000405402 RBM42Q9BTD8 480 aaKnown RBP16.66■□□□□ 0.26
GSE1-203ENST00000405402 NEXNQ0ZGT2 675 aa16.66■□□□□ 0.26
GSE1-203ENST00000405402 DDX54Q8TDD1 881 aaKnown RBP16.66■□□□□ 0.26
GSE1-203ENST00000405402 EIF4G3O43432 1585 aaKnown RBP16.66■□□□□ 0.26
GSE1-203ENST00000405402 GNAI3P08754 354 aa16.66■□□□□ 0.26
GSE1-203ENST00000405402 MBIPQ9NS73 344 aa16.66■□□□□ 0.26
GSE1-203ENST00000405402 SMC3Q9UQE7 1217 aa16.66■□□□□ 0.26
GSE1-203ENST00000405402 SAMD9Q5K651 1589 aa16.66■□□□□ 0.26
GSE1-203ENST00000405402 RABEP1Q15276 862 aa16.66■□□□□ 0.26
GSE1-203ENST00000405402 TBC1D32Q96NH3 1257 aa16.66■□□□□ 0.26
GSE1-203ENST00000405402 SIL1Q9H173 461 aa16.66■□□□□ 0.26
GSE1-203ENST00000405402 FAM13BQ9NYF5 915 aa16.66■□□□□ 0.26
GSE1-203ENST00000405402 TOMM22Q9NS69 142 aa16.65■□□□□ 0.26
GSE1-203ENST00000405402 H3BQV1 296 aa16.65■□□□□ 0.26
GSE1-203ENST00000405402 IFFO2Q5TF58 517 aa16.65■□□□□ 0.26
GSE1-203ENST00000405402 RIC3Q7Z5B4 369 aa16.65■□□□□ 0.26
GSE1-203ENST00000405402 PHACTR3Q96KR7 559 aa16.65■□□□□ 0.26
GSE1-203ENST00000405402 ZNF692Q9BU19 519 aaPredicted RBP16.65■□□□□ 0.26
GSE1-203ENST00000405402 ASXL1Q8IXJ9 1541 aa16.65■□□□□ 0.26
GSE1-203ENST00000405402 GAS2L2Q8NHY3 880 aa16.65■□□□□ 0.26
GSE1-203ENST00000405402 LARP6Q9BRS8 491 aaKnown RBP16.65■□□□□ 0.26
GSE1-203ENST00000405402 GRPEL1Q9HAV7 217 aa16.65■□□□□ 0.26
GSE1-203ENST00000405402 HDAC5Q9UQL6 1122 aa16.65■□□□□ 0.26
GSE1-203ENST00000405402 KDM5BQ9UGL1 1544 aa16.64■□□□□ 0.25
GSE1-203ENST00000405402 NUTM1Q86Y26 1132 aa16.64■□□□□ 0.25
GSE1-203ENST00000405402 AEBP1Q8IUX7 1158 aa16.64■□□□□ 0.25
GSE1-203ENST00000405402 TTC5Q8N0Z6 440 aa16.64■□□□□ 0.25
GSE1-203ENST00000405402 SSFA2P28290 1259 aa16.63■□□□□ 0.25
GSE1-203ENST00000405402 FAM184AQ8NB25 1140 aa16.63■□□□□ 0.25
GSE1-203ENST00000405402 NEUROD6Q96NK8 337 aa16.63■□□□□ 0.25
GSE1-203ENST00000405402 FIBPO43427 364 aa16.63■□□□□ 0.25
GSE1-203ENST00000405402 ERC2O15083 957 aa16.63■□□□□ 0.25
GSE1-203ENST00000405402 C16orf71Q8IYS4 520 aaPredicted RBP16.63■□□□□ 0.25
GSE1-203ENST00000405402 CLASRPQ8N2M8 674 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms